RNAprotDB

All interfaces > All interologs > Interface groups > group127 > 7O7Y_Ba_B5

Interface analysis

mouse controls

Style

Protein

Cartoon
Licorice
Surface

RNA

Cartoon
Licorice
Surface

Color

Chain
Chain (with hetatm)
Chainbow
Hydrophobicity
Electrostatics (surface only)
Conservation*

View

Focus on

Interface
RNA
Protein
All

Show chains

Interface

show as licorice
show Accessibility
Rim - Core

Contacts -

7O7Y_Ba
7O7Y_B5
Distance
Base Pair
Hbond nuc:res
Base Stacking
Residue conservation
Ba:2 [PRO] B5:1464 [C] 3.28 B5:1291 [G] 0.0
Ba:2 [PRO] B5:1465 [G] 2.84 B5:1290 [C] 0.0
Ba:2 [PRO] B5:2184 [A] 3.69 B5:2136 [U] 0.0
Ba:2 [PRO] B5:2185 [G] 3.18 B5:2135 [C] 0.0
Ba:3 [SER] B5:1284 [OMC] 4.87 B5:1471 [G] 0.0
Ba:3 [SER] B5:1465 [G] 4.93 B5:1290 [C] 0.0
Ba:3 [SER] B5:2185 [G] 3.05 B5:2135 [C] 0.0
Ba:3 [SER] B5:2187 [U] 3.02 B5:2134 [G] base:SC 0.0
Ba:4 [ARG] B5:2183 [C] 2.89 B5:2137 [G] 0.0
Ba:4 [ARG] B5:2184 [A] 2.91 B5:2136 [U] 0.0
Ba:4 [ARG] B5:2185 [G] 4.56 B5:2135 [C] 0.0
Ba:4 [ARG] B5:2187 [U] 3.25 B5:2134 [G] base:BB 0.0
Ba:5 [LEU] B5:1464 [C] 4.13 B5:1291 [G] 0.0
Ba:5 [LEU] B5:1465 [G] 3.82 B5:1290 [C] 0.0
Ba:5 [LEU] B5:1466 [U] 4.26 B5:1289 [A] 0.0
Ba:6 [ARG] B5:1283 [U] 4.23 B5:1473 [A] 0.0
Ba:6 [ARG] B5:1284 [OMC] 2.32 B5:1471 [G] 0.0
Ba:6 [ARG] B5:1465 [G] 3.57 B5:1290 [C] 0.0
Ba:6 [ARG] B5:1466 [U] 3.2 B5:1289 [A] 0.0
Ba:6 [ARG] B5:2185 [G] 4.85 B5:2135 [C] 0.0
Ba:7 [LYS] B5:1465 [G] 4.95 B5:1290 [C] 0.0
Ba:7 [LYS] B5:1466 [U] 2.78 B5:1289 [A] 0.0
Ba:7 [LYS] B5:1467 [G] 3.15 B5:1288 [C] 0.0
Ba:7 [LYS] B5:2126 [G] 4.89 B5:1621 [C] 0.0
Ba:7 [LYS] B5:2127 [G] 2.56 B5:1620 [C] 0.0
Ba:7 [LYS] B5:2128 [A] 3.25 B5:1619 [U] 0.0
Ba:8 [THR] B5:1282 [G] 3.01 B5:1614 [U] sugar:SC 0.0
Ba:8 [THR] B5:1283 [U] 2.51 B5:1473 [A] 0.0
Ba:9 [ARG] B5:1616 [C] 3.05 B5:2131 [G] base:BB 0.0
Ba:9 [ARG] B5:2134 [G] 4.64 B5:2187 [U] 0.0
Ba:9 [ARG] B5:2187 [U] 3.38 B5:2134 [G] base/AA stacks 0.0
Ba:9 [ARG] B5:2188 [G] 2.94 B5:2133 [C] base:SC 0.0
Ba:10 [LYS] B5:1616 [C] 3.97 B5:2131 [G] 0.0
Ba:10 [LYS] B5:1617 [C] 4.07 B5:2130 [G] 0.0
Ba:10 [LYS] B5:2129 [G] 4.01 B5:1618 [C] 0.0
Ba:10 [LYS] B5:2130 [G] 3.23 B5:1617 [C] base:SC, base:SC 0.0
Ba:10 [LYS] B5:2131 [G] 3.36 B5:1616 [C] 0.0
Ba:11 [LEU] B5:1615 [U] 3.64 0.0
Ba:11 [LEU] B5:2127 [G] 4.2 B5:1620 [C] 0.0
Ba:12 [ARG] B5:1281 [A] 4.98 B5:2189 [C] 0.0
Ba:12 [ARG] B5:1282 [G] 2.82 B5:1614 [U] 0.0
Ba:12 [ARG] B5:1614 [U] 4.74 B5:1282 [G] 0.0
Ba:12 [ARG] B5:1615 [U] 3.31 base/AA stacks 0.0
Ba:12 [ARG] B5:1616 [C] 3.91 B5:2131 [G] 0.0
Ba:12 [ARG] B5:1617 [C] 4.2 B5:2130 [G] 0.0
Ba:12 [ARG] B5:2187 [U] 4.86 B5:2134 [G] 0.0
Ba:12 [ARG] B5:2188 [G] 3.16 B5:2133 [C] 0.0
Ba:13 [GLY] B5:1614 [U] 4.87 B5:1282 [G] 0.0
Ba:13 [GLY] B5:1615 [U] 3.01 0.0
Ba:13 [GLY] B5:1616 [C] 3.99 B5:2131 [G] 0.0
Ba:14 [HIS] B5:1615 [U] 3.15 0.0
Ba:14 [HIS] B5:1617 [C] 4.62 B5:2130 [G] 0.0
Ba:14 [HIS] B5:2125 [A] 4.8 B5:1622 [G] 0.0
Ba:14 [HIS] B5:2126 [G] 4.51 B5:1621 [C] 0.0
Ba:15 [VAL] B5:1261 [U] 3.83 B5:1270 [A2M] 0.0
Ba:15 [VAL] B5:1614 [U] 3.21 B5:1282 [G] 0.0
Ba:15 [VAL] B5:1615 [U] 3.11 0.0
Ba:16 [SER] B5:1262 [C] 4.84 B5:1266 [1MA] 0.0
Ba:16 [SER] B5:1282 [G] 4.09 B5:1614 [U] 0.0
Ba:16 [SER] B5:1614 [U] 3.96 B5:1282 [G] 0.0
Ba:16 [SER] B5:2125 [A] 4.62 B5:1622 [G] 0.0
Ba:16 [SER] B5:2126 [G] 3.28 B5:1621 [C] 0.0
Ba:17 [HIS] B5:1282 [G] 3.18 B5:1614 [U] sugar:SC base/AA stacks 0.0
Ba:17 [HIS] B5:1614 [U] 4.17 B5:1282 [G] 0.0
Ba:17 [HIS] B5:2126 [G] 4.5 B5:1621 [C] 0.0
Ba:18 [GLY] B5:1789 [A] 4.0 0.0
Ba:18 [GLY] B5:1790 [G] 3.7 B5:1641 [C] 0.0
Ba:18 [GLY] B5:2126 [G] 3.16 B5:1621 [C] 0.0
Ba:18 [GLY] B5:2127 [G] 3.77 B5:1620 [C] 0.0
Ba:19 [HIS] B5:1282 [G] 3.06 B5:1614 [U] base/AA stacks 0.0
Ba:19 [HIS] B5:1790 [G] 3.89 B5:1641 [C] 0.0
Ba:19 [HIS] B5:1791 [U] 4.33 B5:1640 [G] 0.0
Ba:19 [HIS] B5:2126 [G] 3.28 B5:1621 [C] 0.0
Ba:20 [GLY] B5:1790 [G] 3.72 B5:1641 [C] 0.0
Ba:20 [GLY] B5:1791 [U] 3.82 B5:1640 [G] 0.0
Ba:20 [GLY] B5:2125 [A] 3.34 B5:1622 [G] 0.0
Ba:20 [GLY] B5:2126 [G] 2.88 B5:1621 [C] 0.0
Ba:21 [ARG] B5:1261 [U] 2.77 B5:1270 [A2M] 0.0
Ba:21 [ARG] B5:1262 [C] 2.85 B5:1266 [1MA] 0.0
Ba:21 [ARG] B5:1263 [U] 4.32 B5:3608 [A] 0.0
Ba:21 [ARG] B5:1790 [G] 4.95 B5:1641 [C] 0.0
Ba:21 [ARG] B5:1791 [U] 3.96 B5:1640 [G] 0.0
Ba:21 [ARG] B5:2124 [U] 4.47 B5:1623 [A] 0.0
Ba:21 [ARG] B5:2125 [A] 3.33 B5:1622 [G] 0.0
Ba:21 [ARG] B5:2126 [G] 4.88 B5:1621 [C] 0.0
Ba:22 [ILE] B5:1263 [U] 3.3 B5:3608 [A] 0.0
Ba:22 [ILE] B5:1623 [A] 4.7 B5:2124 [U] 0.0
Ba:22 [ILE] B5:1624 [A] 3.92 B5:1820 [OMC] 0.0
Ba:22 [ILE] B5:1625 [G] 4.58 B5:1819 [G] 0.0
Ba:22 [ILE] B5:1791 [U] 3.23 B5:1640 [G] 0.0
Ba:22 [ILE] B5:1792 [G] 3.49 0.0
Ba:23 [GLY] B5:1636 [G] 4.88 B5:1629 [C] 0.0
Ba:23 [GLY] B5:1790 [G] 4.98 B5:1641 [C] 0.0
Ba:23 [GLY] B5:1791 [U] 2.61 B5:1640 [G] 0.0
Ba:23 [GLY] B5:1792 [G] 4.67 0.0
Ba:24 [LYS] B5:1262 [C] 4.04 B5:1266 [1MA] 0.0
Ba:24 [LYS] B5:1263 [U] 4.75 B5:3608 [A] 0.0
Ba:24 [LYS] B5:1611 [U] 4.62 B5:1476 [C] 0.0
Ba:24 [LYS] B5:1612 [G] 4.16 B5:1475 [C] 0.0
Ba:24 [LYS] B5:1791 [U] 4.17 B5:1640 [G] 0.0
Ba:25 [HIS] B5:1282 [G] 2.82 B5:1614 [U] base:SC 0.0
Ba:25 [HIS] B5:1474 [C] 2.84 B5:1613 [G] base:BB base/AA stacks 0.0
Ba:25 [HIS] B5:1475 [C] 4.89 B5:1612 [G] 0.0
Ba:26 [ARG] B5:1474 [C] 4.99 B5:1613 [G] 0.0
Ba:26 [ARG] B5:1609 [G] 3.28 0.0
Ba:26 [ARG] B5:1610 [C] 2.77 B5:1477 [OMG] base/AA stacks 0.0
Ba:26 [ARG] B5:1611 [U] 2.67 B5:1476 [C] 0.0
Ba:27 [LYS] B5:1472 [G] 4.85 0.0
Ba:27 [LYS] B5:1473 [A] 2.39 B5:1283 [U] 0.0
Ba:27 [LYS] B5:1474 [C] 4.67 B5:1613 [G] 0.0
Ba:27 [LYS] B5:1475 [C] 4.21 B5:1612 [G] 0.0
Ba:27 [LYS] B5:1477 [OMG] 4.89 B5:1610 [C] 0.0
Ba:27 [LYS] B5:1608 [A] 3.32 0.0
Ba:27 [LYS] B5:1609 [G] 3.17 0.0
Ba:27 [LYS] B5:1610 [C] 4.17 B5:1477 [OMG] 0.0
Ba:28 [HIS] B5:39 [A] 3.97 0.0
Ba:28 [HIS] B5:1470 [A] 3.3 B5:1285 [U] 0.0
Ba:28 [HIS] B5:1471 [G] 4.78 B5:1284 [OMC] 0.0
Ba:28 [HIS] B5:1473 [A] 4.84 B5:1283 [U] 0.0
Ba:28 [HIS] B5:1608 [A] 2.96 0.0
Ba:28 [HIS] B5:1609 [G] 2.95 0.0
Ba:29 [PRO] B5:39 [A] 3.96 0.0
Ba:29 [PRO] B5:1609 [G] 3.91 0.0
Ba:29 [PRO] B5:1635 [G] 3.45 B5:1630 [C] 0.0
Ba:29 [PRO] B5:1636 [G] 3.31 B5:1629 [C] 0.0
Ba:30 [GLY] B5:39 [A] 2.81 base:BB 0.0
Ba:30 [GLY] B5:1635 [G] 4.07 B5:1630 [C] 0.0
Ba:30 [GLY] B5:1636 [G] 3.86 B5:1629 [C] 0.0
Ba:31 [GLY] B5:38 [A] 3.28 0.0
Ba:31 [GLY] B5:39 [A] 3.15 0.0
Ba:31 [GLY] B5:1470 [A] 4.28 B5:1285 [U] 0.0
Ba:32 [ARG] B5:37 [U] 3.62 B5:44 [A] 0.0
Ba:32 [ARG] B5:38 [A] 3.03 0.0
Ba:32 [ARG] B5:94 [A] 4.5 B5:90 [G] 0.0
Ba:32 [ARG] B5:95 [G] 4.11 B5:89 [C] 0.0
Ba:32 [ARG] B5:1469 [U] 4.92 B5:1286 [A] 0.0
Ba:32 [ARG] B5:1470 [A] 3.15 B5:1285 [U] 0.0
Ba:32 [ARG] B5:1471 [G] 2.93 B5:1284 [OMC] 0.0
Ba:32 [ARG] B5:1473 [A] 4.29 B5:1283 [U] 0.0
Ba:32 [ARG] B5:1607 [U] 3.37 B5:1478 [A] 0.0
Ba:32 [ARG] B5:1608 [A] 3.29 0.0
Ba:33 [GLY] B5:94 [A] 4.81 B5:90 [G] 0.0
Ba:33 [GLY] B5:95 [G] 3.17 B5:89 [C] 0.0
Ba:33 [GLY] B5:1469 [U] 3.76 B5:1286 [A] 0.0
Ba:33 [GLY] B5:1470 [A] 2.92 B5:1285 [U] 0.0
Ba:34 [ASN] B5:94 [A] 3.62 B5:90 [G] 0.0
Ba:34 [ASN] B5:95 [G] 2.75 B5:89 [C] 0.0
Ba:35 [ALA] B5:38 [A] 3.56 0.0
Ba:35 [ALA] B5:39 [A] 4.0 0.0
Ba:35 [ALA] B5:94 [A] 4.28 B5:90 [G] 0.0
Ba:35 [ALA] B5:95 [G] 4.78 B5:89 [C] 0.0
Ba:36 [GLY] B5:38 [A] 4.41 0.0
Ba:36 [GLY] B5:39 [A] 2.98 0.0
Ba:37 [GLY] B5:39 [A] 4.87 0.0
Ba:38 [MET] B5:93 [G] 4.02 B5:43 [U] 0.0
Ba:38 [MET] B5:4085 [A] 4.23 B5:4118 [U] 0.0
Ba:38 [MET] B5:4086 [U] 3.85 B5:4117 [G] 0.0
Ba:38 [MET] B5:4122 [A] 4.21 B5:4052 [OMU] 0.0
Ba:39 [V5N] B5:39 [A] 4.54 0.0
Ba:39 [V5N] B5:1629 [C] 4.65 B5:1636 [G] 0.0
Ba:39 [V5N] B5:1630 [C] 3.58 B5:1635 [G] 0.0
Ba:39 [V5N] B5:4124 [A] 3.75 0.0
Ba:40 [HIS] B5:39 [A] 3.3 base/AA stacks 0.0
Ba:40 [HIS] B5:1629 [C] 4.71 B5:1636 [G] 0.0
Ba:40 [HIS] B5:1630 [C] 3.25 B5:1635 [G] 0.0
Ba:40 [HIS] B5:1632 [PSU] 4.9 0.0
Ba:40 [HIS] B5:1635 [G] 3.62 B5:1630 [C] 0.0
Ba:40 [HIS] B5:1636 [G] 2.74 B5:1629 [C] base:BB 0.0
Ba:40 [HIS] B5:1637 [A] 3.3 B5:1628 [U] 0.0
Ba:41 [HIS] B5:1636 [G] 2.51 B5:1629 [C] sugar:SC 0.0
Ba:41 [HIS] B5:1637 [A] 3.11 B5:1628 [U] 0.0
Ba:42 [ARG] B5:1637 [A] 4.63 B5:1628 [U] 0.0
Ba:42 [ARG] B5:4085 [A] 4.65 B5:4118 [U] 0.0
Ba:42 [ARG] B5:4122 [A] 3.06 B5:4052 [OMU] 0.0
Ba:42 [ARG] B5:4123 [G] 2.81 B5:4084 [G] base:SC, base:SC 0.0
Ba:43 [ILE] B5:1628 [U] 3.54 B5:1637 [A] 0.0
Ba:43 [ILE] B5:1629 [C] 4.26 B5:1636 [G] 0.0
Ba:43 [ILE] B5:1637 [A] 3.69 B5:1628 [U] 0.0
Ba:43 [ILE] B5:1638 [PSU] 3.53 B5:1627 [U] 0.0
Ba:43 [ILE] B5:4050 [A] 3.42 0.0
Ba:44 [ASN] B5:1637 [A] 3.27 B5:1628 [U] sugar:BB 0.0
Ba:44 [ASN] B5:1638 [PSU] 2.47 B5:1627 [U] 0.0
Ba:45 [PHE] B5:94 [A] 4.72 B5:90 [G] 0.0
Ba:46 [ASP] B5:4052 [OMU] 4.28 B5:4122 [A] 0.0
Ba:47 [LYS] B5:1638 [PSU] 3.28 B5:1627 [U] 0.0
Ba:47 [LYS] B5:1639 [A] 2.32 B5:1626 [U] 0.0
Ba:48 [TYR] B5:1638 [PSU] 4.14 B5:1627 [U] 0.0
Ba:48 [TYR] B5:1639 [A] 3.1 B5:1626 [U] 0.0
Ba:52 [TYR] B5:93 [G] 4.66 B5:43 [U] 0.0
Ba:52 [TYR] B5:94 [A] 2.63 B5:90 [G] 0.0
Ba:53 [PHE] B5:93 [G] 3.33 B5:43 [U] 0.0
Ba:53 [PHE] B5:94 [A] 4.11 B5:90 [G] 0.0
Ba:53 [PHE] B5:4086 [U] 4.02 B5:4117 [G] 0.0
Ba:54 [GLY] B5:92 [C] 4.36 0.0
Ba:54 [GLY] B5:93 [G] 2.91 B5:43 [U] 0.0
Ba:54 [GLY] B5:4086 [U] 3.23 B5:4117 [G] 0.0
Ba:54 [GLY] B5:4087 [C] 3.39 AI:76 [A] 0.0
Ba:55 [LYS] B5:92 [C] 3.28 0.0
Ba:55 [LYS] B5:4086 [U] 4.28 B5:4117 [G] 0.0
Ba:55 [LYS] B5:4087 [C] 2.77 AI:76 [A] 0.0
Ba:55 [LYS] B5:4088 [C] 2.7 B5:4116 [OMG] 0.0
Ba:55 [LYS] B5:4111 [C] 4.42 B5:4093 [G] 0.0
Ba:56 [VAL] B5:1335 [A] 4.03 0.0
Ba:56 [VAL] B5:4110 [G] 4.57 B5:4096 [C] 0.0
Ba:56 [VAL] B5:4111 [C] 3.49 B5:4093 [G] 0.0
Ba:57 [GLY] B5:1335 [A] 3.2 0.0
Ba:57 [GLY] B5:4110 [G] 3.19 B5:4096 [C] 0.0
Ba:57 [GLY] B5:4111 [C] 2.93 B5:4093 [G] 0.0
Ba:58 [MET] B5:88 [A] 4.28 B5:96 [U] 0.0
Ba:58 [MET] B5:1335 [A] 2.98 sugar:BB 0.0
Ba:58 [MET] B5:1336 [A] 3.36 0.0
Ba:58 [MET] B5:4097 [U] 3.76 B5:4109 [A] 0.0
Ba:58 [MET] B5:4098 [U] 3.49 B5:4108 [A] 0.0
Ba:58 [MET] B5:4109 [A] 3.89 B5:4097 [U] 0.0
Ba:58 [MET] B5:4110 [G] 3.29 B5:4096 [C] 0.0
Ba:59 [ARG] B5:88 [A] 3.17 B5:96 [U] 0.0
Ba:59 [ARG] B5:89 [C] 2.91 B5:95 [G] 0.0
Ba:59 [ARG] B5:294 [G] 2.72 sugar:SC 0.0
Ba:59 [ARG] B5:4100 [U] 4.14 0.0
Ba:59 [ARG] B5:4109 [A] 4.3 B5:4097 [U] 0.0
Ba:60 [HIS] B5:87 [A] 2.61 B5:97 [G] sugar:BB 0.0
Ba:60 [HIS] B5:88 [A] 2.66 B5:96 [U] 0.0
Ba:60 [HIS] B5:4100 [U] 3.55 base/AA stacks 0.0
Ba:61 [TYR] B5:87 [A] 3.89 B5:97 [G] 0.0
Ba:61 [TYR] B5:88 [A] 4.05 B5:96 [U] 0.0
Ba:61 [TYR] B5:89 [C] 4.3 B5:95 [G] 0.0
Ba:61 [TYR] B5:294 [G] 3.22 base/AA stacks 0.0
Ba:61 [TYR] B5:295 [A] 3.93 0.0
Ba:61 [TYR] B5:315 [G] 3.28 B5:292 [G] 0.0
Ba:61 [TYR] B5:316 [U] 3.42 0.0
Ba:61 [TYR] B5:4100 [U] 2.74 base:BB, base:BB 0.0
Ba:62 [HIS] B5:69 [A] 3.08 B5:71 [C] 0.0
Ba:62 [HIS] B5:87 [A] 3.44 B5:97 [G] 0.0
Ba:62 [HIS] B5:99 [A] 4.86 B5:84 [A] 0.0
Ba:62 [HIS] B5:315 [G] 3.15 B5:292 [G] base/AA stacks 0.0
Ba:62 [HIS] B5:4100 [U] 4.15 0.0
Ba:63 [LEU] B5:87 [A] 3.08 B5:97 [G] sugar:BB 0.0
Ba:63 [LEU] B5:99 [A] 4.07 B5:84 [A] 0.0
Ba:64 [LYS] B5:69 [A] 3.71 B5:71 [C] 0.0
Ba:64 [LYS] B5:70 [A] 2.73 0.0
Ba:64 [LYS] B5:100 [C] 4.8 B5:83 [C] 0.0
Ba:64 [LYS] B5:4101 [G] 4.53 B5:322 [C] 0.0
Ba:65 [ARG] B5:83 [C] 4.87 B5:100 [C] 0.0
Ba:65 [ARG] B5:84 [A] 3.34 B5:99 [A] 0.0
Ba:65 [ARG] B5:86 [U] 2.74 B5:98 [A] sugar:SC 0.0
Ba:65 [ARG] B5:87 [A] 3.84 B5:97 [G] 0.0
Ba:66 [ASN] B5:100 [C] 4.81 B5:83 [C] 0.0
Ba:66 [ASN] B5:101 [A] 3.3 B5:82 [U] base:SC, sugar:SC 0.0
Ba:67 [GLN] B5:70 [A] 3.22 0.0
Ba:70 [CYS] B5:1340 [G] 4.91 0.0
Ba:72 [THR] B5:1340 [G] 3.38 0.0
Ba:74 [ASN] B5:1331 [A] 2.72 base:SC, base:SC 0.0
Ba:74 [ASN] B5:1341 [A] 4.54 0.0
Ba:77 [LYS] B5:1298 [A] 3.13 B5:1329 [G] sugar:SC 0.0
Ba:77 [LYS] B5:1330 [C] 3.37 sugar:SC 0.0
Ba:77 [LYS] B5:1457 [G] 3.18 base:SC 0.0
Ba:81 [LEU] B5:511 [A] 3.18 0.0
Ba:82 [VAL] B5:511 [A] 3.56 0.0
Ba:83 [SER] B5:510 [G] 3.49 B5:644 [C] 0.0
Ba:83 [SER] B5:511 [A] 2.79 sugar:BB, sugar:SC 0.0
Ba:83 [SER] B5:512 [U] 2.67 B5:643 [A] 0.0
Ba:85 [GLN] B5:510 [G] 2.93 B5:644 [C] base:SC, base:SC, sugar:SC 0.0
Ba:85 [GLN] B5:511 [A] 4.96 0.0
Ba:85 [GLN] B5:512 [U] 2.57 B5:643 [A] 0.0
Ba:85 [GLN] B5:645 [C] 3.79 B5:509 [G] 0.0
Ba:86 [THR] B5:511 [A] 3.09 sugar:SC 0.0
Ba:86 [THR] B5:512 [U] 3.2 B5:643 [A] 0.0
Ba:89 [ASN] B5:512 [U] 3.33 B5:643 [A] 0.0
Ba:100 [ILE] B5:511 [A] 3.19 0.0
Ba:101 [ILE] B5:511 [A] 3.85 0.0
Ba:102 [ASP] B5:511 [A] 2.68 base:BB, base:BB 0.0
Ba:103 [VAL] B5:511 [A] 4.66 0.0
Ba:105 [ARG] B5:511 [A] 3.55 base/AA stacks 0.0
Ba:106 [SER] B5:511 [A] 2.92 base:SC 0.0
Ba:110 [LYS] B5:1339 [U] 4.06 B5:1332 [A] 0.0
Ba:110 [LYS] B5:1340 [G] 2.67 base:SC 0.0
Ba:112 [LEU] B5:1331 [A] 3.57 0.0
Ba:112 [LEU] B5:1340 [G] 3.62 0.0
Ba:112 [LEU] B5:1341 [A] 3.39 0.0
Ba:113 [GLY] B5:1331 [A] 4.57 0.0
Ba:113 [GLY] B5:1341 [A] 3.02 0.0
Ba:113 [GLY] B5:1342 [A] 2.9 0.0
Ba:114 [LYS] B5:1331 [A] 3.61 0.0
Ba:114 [LYS] B5:1341 [A] 3.46 0.0
Ba:114 [LYS] B5:1342 [A] 3.17 0.0
Ba:114 [LYS] B5:1375 [A] 4.14 0.0
Ba:114 [LYS] B5:1454 [C] 2.93 B5:1421 [G] 0.0
Ba:114 [LYS] B5:1455 [A] 3.22 0.0
Ba:115 [GLY] B5:1342 [A] 3.14 0.0
Ba:115 [GLY] B5:1375 [A] 4.21 0.0
Ba:116 [LYS] B5:1342 [A] 3.47 0.0
Ba:116 [LYS] B5:1374 [G] 3.73 0.0
Ba:116 [LYS] B5:1375 [A] 3.72 0.0
Ba:116 [LYS] B5:1456 [C] 3.52 0.0
Ba:119 [LYS] B5:1372 [C] 4.73 B5:1344 [G] 0.0
Ba:119 [LYS] B5:1373 [C] 3.94 B5:1343 [G] 0.0
Ba:119 [LYS] B5:1374 [G] 3.56 base:SC 0.0
Ba:129 [PHE] B5:1340 [G] 4.33 0.0
Ba:130 [SER] B5:1340 [G] 3.38 0.0
Ba:130 [SER] B5:1341 [A] 2.82 0.0
Ba:131 [ARG] B5:1340 [G] 2.91 0.0
Ba:131 [ARG] B5:1341 [A] 4.99 0.0
Ba:131 [ARG] B5:1423 [C] 4.96 B5:1451 [G] 0.0
Ba:131 [ARG] B5:1443 [G] 3.5 B5:1432 [C] 0.0
Ba:131 [ARG] B5:1444 [G] 3.16 B5:1431 [C] 0.0
Ba:131 [ARG] B5:1445 [G] 4.85 B5:1429 [C] 0.0
Ba:132 [ARG] B5:1340 [G] 3.52 0.0
Ba:132 [ARG] B5:1341 [A] 3.43 0.0
Ba:132 [ARG] B5:1422 [C] 4.54 B5:1453 [G] 0.0
Ba:132 [ARG] B5:1423 [C] 2.38 B5:1451 [G] 0.0
Ba:132 [ARG] B5:1424 [C] 3.79 B5:1450 [G] 0.0
Ba:133 [ALA] B5:1341 [A] 4.11 0.0
Ba:136 [LYS] B5:1341 [A] 4.9 0.0
Ba:136 [LYS] B5:1342 [A] 2.75 0.0
Ba:148 [ALA] B5:72 [C] 4.42 0.0

logo_download Export the table of contacts

*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)

Properties of this interface

Interolog group ID Structure ID Structure description
 UniProt ID
 		ECOD label(s)
 		RFAM label(s)
 		Is ribosome? RCSB PDB link
group127 7O7Y_Ba_B5 Ba: 60s ribosomal protein l27a, Oryctolagus cuniculus (natural) B5: 28s rRNA, Oryctolagus cuniculus (natural) G1SNY0 Ribosomal proteins L15p and L18e Eukaryotic large subunit ribosomal RNA ✔

Interologs

Total number of interologs for this interface: 5

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
6S0Z_J_A 7O7Y_Ba_B5 0.38 0.88 4.38 0.11 Ribosomal proteins L15p and L18e compare
6AZ3_L_2 7O7Y_Ba_B5 0.97 0.91 0.6 0.67 Ribosomal proteins L15p and L18e Eukaryotic large subunit ribosomal RNA compare
6AZ3_L_1 7O7Y_Ba_B5 0.86 0.92 0.75 0.6 Ribosomal proteins L15p and L18e Eukaryotic large subunit ribosomal RNA compare
1YHQ_L_0 7O7Y_Ba_B5 0.62 0.93 2.36 0.35 Ribosomal proteins L15p and L18e compare
1VQ8_L_0 7O7Y_Ba_B5 0.62 0.93 2.45 0.36 Ribosomal proteins L15p and L18e compare