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All interfaces > All interologs > Interface groups > group128 > 1VQ8_S_0 vs 6AZ3_V_1,7

Interface analysis


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Common contacts -

1VQ8_S
1VQ8_0
6AZ3_V
6AZ3_1,7
Conserved?
S:65 [VAL] 0:1447 [U] V:126 [TYR] 1:1630 [U] ✔
S:55 [GLN] 0:1446 [U] V:116 [LEU] 1:1629 [U] ✔
S:55 [GLN] 0:1447 [U] V:116 [LEU] 1:1630 [U] ✔
S:23 [LYS] 0:1508 [C] V:84 [THR] 1:1762 [C] ✔
S:58 [MET] 0:1418 [U] V:119 [PRO] 1:1601 [U] ✔
S:58 [MET] 0:1445 [G] V:119 [PRO] 1:1628 [OMG] ✔
S:58 [MET] 0:1446 [U] V:119 [PRO] 1:1629 [U] ✔
S:52 [VAL] 0:1448 [A] V:113 [VAL] 1:1631 [G] ✔
S:67 [ARG] 0:1508 [C] V:128 [ARG] 1:1762 [C] ✔
S:51 [GLN] 0:1507 [C] V:112 [LYS] 1:1761 [C] ✔
S:51 [GLN] 0:1508 [C] V:112 [LYS] 1:1762 [C] ✔
S:11 [THR] 0:1444 [G] V:72 [THR] 1:1627 [A] ✔
S:11 [THR] 0:1445 [G] V:72 [THR] 1:1628 [OMG] ✔
S:9 [HIS] 0:1445 [G] V:70 [LEU] 1:1628 [OMG] ✔
S:35 [GLY] 0:1673 [U] V:96 [THR] 7:1924 [C] ✔
S:53 [ASN] 0:1447 [U] V:114 [ASN] 1:1630 [U] ✔
S:53 [ASN] 0:1448 [A] V:114 [ASN] 1:1631 [G] ✔
S:53 [ASN] 0:1507 [C] V:114 [ASN] 1:1761 [C] ✔
S:63 [LYS] 0:1445 [G] V:124 [LYS] 1:1628 [OMG] ✔
S:63 [LYS] 0:1446 [U] V:124 [LYS] 1:1629 [U] ✔
S:12 [GLU] 0:1501 [A] V:73 [ASP] 1:1755 [U] ✔
S:14 [ALA] 0:1445 [G] V:75 [ALA] 1:1628 [OMG] ✔
S:21 [GLN] 0:1507 [C] V:82 [ASN] 1:1761 [C] ✔
S:21 [GLN] 0:1508 [C] V:82 [ASN] 1:1762 [C] ✔
S:17 [ASP] 0:1447 [U] V:78 [LYS] 1:1630 [U] ✔
S:33 [SER] 0:1673 [U] V:94 [ASN] 7:1924 [C] ✔
S:33 [SER] 0:1674 [C] V:94 [ASN] 7:1925 [C] ✔
S:13 [LYS] 0:1445 [G] V:74 [LYS] 1:1628 [OMG] ✔
S:13 [LYS] 0:1446 [U] V:74 [LYS] 1:1629 [U] ✔
S:13 [LYS] 0:1447 [U] V:74 [LYS] 1:1630 [U] ✔
S:13 [LYS] 0:1502 [A] V:74 [LYS] 1:1756 [A] ✔
S:13 [LYS] 0:1503 [U] V:74 [LYS] 1:1757 [U] ✔
S:54 [THR] 0:1447 [U] V:115 [THR] 1:1630 [U] ✔
S:54 [THR] 0:1448 [A] V:115 [THR] 1:1631 [G] ✔
S:34 [LYS] 0:1448 [A] V:95 [LYS] 1:1631 [G] ✔
S:34 [LYS] 0:1449 [G] V:95 [LYS] 1:1632 [U] ✔
S:23 [LYS] 0:1507 [C] V:84 [THR] 1:1761 [C] ❌ 6AZ3_V_1,7
S:9 [HIS] 0:1444 [G] V:70 [LEU] 1:1627 [A] ❌ 6AZ3_V_1,7
S:12 [GLU] 0:1444 [G] V:73 [ASP] 1:1627 [A] ❌ 6AZ3_V_1,7
S:62 [LYS] 0:1674 [C] V:123 [LYS] 7:1925 [C] ❌ 6AZ3_V_1,7
S:54 [THR] 0:1674 [C] V:115 [THR] 7:1925 [C] ❌ 6AZ3_V_1,7
S:34 [LYS] 0:1673 [U] V:95 [LYS] 7:1924 [C] ❌ 6AZ3_V_1,7
S:34 [LYS] 0:1674 [C] V:95 [LYS] 7:1925 [C] ❌ 6AZ3_V_1,7
S:51 [GLN] 0:1449 [G] V:112 [LYS] 1:1632 [U] ❌ 1VQ8_S_0
S:53 [ASN] 0:1449 [G] V:114 [ASN] 1:1632 [U] ❌ 1VQ8_S_0
S:56 [ASN] 0:1446 [U] V:117 [ILE] 1:1629 [U] ❌ 1VQ8_S_0
S:65 [VAL] 0:1445 [G] V:126 [TYR] 1:1628 [OMG] ❌ 1VQ8_S_0
S:65 [VAL] 0:1446 [U] V:126 [TYR] 1:1629 [U] ❌ 1VQ8_S_0
S:67 [ARG] 0:1507 [C] V:128 [ARG] 1:1761 [C] ❌ 1VQ8_S_0
S:13 [LYS] 0:1501 [A] V:74 [LYS] 1:1755 [U] ❌ 1VQ8_S_0
S:17 [ASP] 0:1507 [C] V:78 [LYS] 1:1761 [C] ❌ 1VQ8_S_0
S:34 [LYS] 0:1447 [U] V:95 [LYS] 1:1630 [U] ❌ 1VQ8_S_0
S:58 [MET] 0:1417 [G] V:119 [PRO] 1:1600 [A] ❌ 6AZ3_1:1600 no longer at interface
S:53 [ASN] 0:1506 [U] V:114 [ASN] 1:1760 [U] ❌ 6AZ3_1:1760 no longer at interface
S:16 [ASN] 0:1499 [U] V:77 [LYS] 1:1753 [A] ❌ 1VQ8_S:16, 1VQ8_0:1499 no longer at interface
S:16 [ASN] 0:1500 [U] V:77 [LYS] 1:1754 [U] ❌ 1VQ8_S:16, 1VQ8_0:1500 no longer at interface
S:20 [PHE] 0:1499 [U] V:81 [GLU] 1:1753 [A] ❌ 1VQ8_S:20, 1VQ8_0:1499 no longer at interface
S:20 [PHE] 0:1500 [U] V:81 [GLU] 1:1754 [U] ❌ 1VQ8_S:20, 1VQ8_0:1500 no longer at interface
S:35 [GLY] 0:1672 [G] V:96 [THR] 7:1923 [C] ❌ 1VQ8_0:1672 no longer at interface
S:32 [ALA] 0:1674 [C] V:93 [ALA] 7:1925 [C] ❌ 6AZ3_V:93 no longer at interface
S:25 [GLN] 0:1445 [G] V:86 [THR] 1:1628 [OMG] ❌ 6AZ3_V:86 no longer at interface
S:39 [ASP] 0:1673 [U] V:100 [LYS] 7:1924 [C] ❌ 1VQ8_S:39 no longer at interface
S:57 [THR] 0:1445 [G] V:118 [ARG] 1:1628 [OMG] ❌ 1VQ8_S:57 no longer at interface
S:36 [GLU] 0:1674 [C] V:97 [GLU] 7:1925 [C] ❌ 1VQ8_S:36 no longer at interface
S:36 [GLU] 0:1673 [U] V:97 [GLU] 7:1924 [C] ❌ 1VQ8_S:36 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal proteins S24e, L23 and L15e 0.7 0.63 0.36 0.94 0.7 0.83 0.64 0.70 0.64 0.43 0.45


Other pairs involving 1VQ8_S_0 or 6AZ3_V_1,7

Total number of entries: 13

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1VQ8_S_0 6S0Z_R_A 0.72 0.93 1.29 0.34 Ribosomal proteins S24e, L23 and L15e compare
1VQ8_S_0 7RYG_S_A 0.49 0.91 2.81 0.24 Ribosomal proteins S24e, L23 and L15e compare
1VQ8_S_0 7O7Y_BX_B5,B8 0.81 0.94 1.11 0.41 Ribosomal proteins S24e, L23 and L15e compare
1VQ8_S_0 1YHQ_S_0 1.00 1.0 0.15 1.0 Ribosomal proteins S24e, L23 and L15e Archaeal large subunit ribosomal RNA compare
1VQ8_S_0 7OF0_U_A 0.64 0.91 3.54 0.14 Ribosomal proteins S24e, L23 and L15e compare
1VQ8_S_0 4Y4O_1X_1A 0.81 0.93 1.76 0.38 Ribosomal proteins S24e, L23 and L15e compare
1VQ8_S_0 7K00_s_a 0.69 0.9 2.2 0.31 Ribosomal proteins S24e, L23 and L15e compare
1VQ8_S_0 6AZ3_V_1,7 0.70 0.7 0.63 0.36 Ribosomal proteins S24e, L23 and L15e compare
1VQ8_S_0 6AZ3_V_2 0.89 0.8 0.88 0.27 Ribosomal proteins S24e, L23 and L15e compare
6AZ3_V_1,7 7O7Y_BX_B5,B8 0.62 0.92 2.44 0.33 Ribosomal proteins S24e, L23 and L15e 5.8S ribosomal RNA & Eukaryotic large subunit ribosomal RNA compare
6AZ3_V_1,7 6S0Z_R_A 0.56 0.65 1.63 0.24 Ribosomal proteins S24e, L23 and L15e compare
6AZ3_V_1,7 7RYG_S_A 0.43 0.63 2.88 0.2 Ribosomal proteins S24e, L23 and L15e compare
1YHQ_S_0 6AZ3_V_1,7 0.70 0.7 0.6 0.36 Ribosomal proteins S24e, L23 and L15e compare