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All interfaces > All interologs > Interface groups > group128 > 1VQ8_S_0 vs 7OF0_U_A

Interface analysis


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Common contacts -

1VQ8_S
1VQ8_0
7OF0_U
7OF0_A
Conserved?
S:65 [VAL] 0:1447 [U] U:96 [TYR] A:2372 [U] ✔
S:55 [GLN] 0:1446 [U] U:71 [ARG] A:2371 [U] ✔
S:55 [GLN] 0:1447 [U] U:71 [ARG] A:2372 [U] ✔
S:58 [MET] 0:1417 [G] U:74 [HIS] A:2341 [C] ✔
S:58 [MET] 0:1418 [U] U:74 [HIS] A:2342 [U] ✔
S:58 [MET] 0:1445 [G] U:74 [HIS] A:2370 [A] ✔
S:52 [VAL] 0:1448 [A] U:68 [VAL] A:2373 [A] ✔
S:56 [ASN] 0:1675 [C] U:72 [VAL] A:2420 [U] ✔
S:56 [ASN] 0:1676 [G] U:72 [VAL] A:2421 [G] ✔
S:56 [ASN] 0:1677 [U] U:72 [VAL] A:2422 [U] ✔
S:11 [THR] 0:1444 [G] U:30 [ARG] A:2369 [A] ✔
S:11 [THR] 0:1445 [G] U:30 [ARG] A:2370 [A] ✔
S:35 [GLY] 0:1673 [U] U:51 [VAL] A:2418 [A] ✔
S:53 [ASN] 0:1447 [U] U:69 [ARG] A:2372 [U] ✔
S:53 [ASN] 0:1448 [A] U:69 [ARG] A:2373 [A] ✔
S:12 [GLU] 0:1444 [G] U:31 [PRO] A:2369 [A] ✔
S:14 [ALA] 0:1445 [G] U:33 [VAL] A:2370 [A] ✔
S:30 [ASP] 0:1675 [C] U:46 [MET] A:2420 [U] ✔
S:32 [ALA] 0:1674 [C] U:48 [MET] A:2419 [C] ✔
S:62 [LYS] 0:1674 [C] U:93 [LYS] A:2419 [C] ✔
S:62 [LYS] 0:1675 [C] U:93 [LYS] A:2420 [U] ✔
S:25 [GLN] 0:1445 [G] U:41 [GLN] A:2370 [A] ✔
S:33 [SER] 0:1673 [U] U:49 [THR] A:2418 [A] ✔
S:33 [SER] 0:1674 [C] U:49 [THR] A:2419 [C] ✔
S:13 [LYS] 0:1445 [G] U:32 [GLY] A:2370 [A] ✔
S:54 [THR] 0:1447 [U] U:70 [THR] A:2372 [U] ✔
S:54 [THR] 0:1448 [A] U:70 [THR] A:2373 [A] ✔
S:54 [THR] 0:1674 [C] U:70 [THR] A:2419 [C] ✔
S:54 [THR] 0:1675 [C] U:70 [THR] A:2420 [U] ✔
S:34 [LYS] 0:1448 [A] U:50 [ARG] A:2373 [A] ✔
S:34 [LYS] 0:1673 [U] U:50 [ARG] A:2418 [A] ✔
S:34 [LYS] 0:1674 [C] U:50 [ARG] A:2419 [C] ✔
S:58 [MET] 0:1446 [U] U:74 [HIS] A:2371 [U] ❌ 7OF0_U_A
S:13 [LYS] 0:1446 [U] U:32 [GLY] A:2371 [U] ❌ 7OF0_U_A
S:13 [LYS] 0:1447 [U] U:32 [GLY] A:2372 [U] ❌ 7OF0_U_A
S:12 [GLU] 0:1445 [G] U:31 [PRO] A:2370 [A] ❌ 1VQ8_S_0
S:13 [LYS] 0:1444 [G] U:32 [GLY] A:2369 [A] ❌ 1VQ8_S_0
S:14 [ALA] 0:1444 [G] U:33 [VAL] A:2369 [A] ❌ 1VQ8_S_0
S:14 [ALA] 0:1447 [U] U:33 [VAL] A:2372 [U] ❌ 1VQ8_S_0
S:14 [ALA] 0:1446 [U] U:33 [VAL] A:2371 [U] ❌ 1VQ8_S_0
S:25 [GLN] 0:1444 [G] U:41 [GLN] A:2369 [A] ❌ 1VQ8_S_0
S:34 [LYS] 0:1447 [U] U:50 [ARG] A:2372 [U] ❌ 1VQ8_S_0
S:35 [GLY] 0:1674 [C] U:51 [VAL] A:2419 [C] ❌ 1VQ8_S_0
S:55 [GLN] 0:1445 [G] U:71 [ARG] A:2370 [A] ❌ 1VQ8_S_0
S:65 [VAL] 0:1445 [G] U:96 [TYR] A:2370 [A] ❌ 1VQ8_S_0
S:65 [VAL] 0:1446 [U] U:96 [TYR] A:2371 [U] ❌ 1VQ8_S_0
S:27 [ALA] 0:1443 [G] U:43 [ARG] A:2368 [C] ❌ 1VQ8_S:27, 1VQ8_0:1443 no longer at interface
S:9 [HIS] 0:1444 [G] U:28 [LEU] A:2369 [A] ❌ 7OF0_U:28 no longer at interface
S:9 [HIS] 0:1445 [G] U:28 [LEU] A:2370 [A] ❌ 7OF0_U:28 no longer at interface
S:63 [LYS] 0:1445 [G] U:94 [VAL] A:2370 [A] ❌ 7OF0_U:94 no longer at interface
S:63 [LYS] 0:1446 [U] U:94 [VAL] A:2371 [U] ❌ 7OF0_U:94 no longer at interface
S:17 [ASP] 0:1447 [U] U:36 [PRO] A:2372 [U] ❌ 7OF0_U:36 no longer at interface
S:31 [ARG] 0:109 [U] U:47 [GLU] A:1696 [C] ❌ 7OF0_U:47 no longer at interface
S:16 [ASN] 0:1447 [U] U:35 [GLN] A:2372 [U] ❌ 1VQ8_S:16 no longer at interface
S:27 [ALA] 0:1444 [G] U:43 [ARG] A:2369 [A] ❌ 1VQ8_S:27 no longer at interface
S:27 [ALA] 0:1445 [G] U:43 [ARG] A:2370 [A] ❌ 1VQ8_S:27 no longer at interface
S:57 [THR] 0:1445 [G] U:73 [GLN] A:2370 [A] ❌ 1VQ8_S:57 no longer at interface
S:57 [THR] 0:1418 [U] U:73 [GLN] A:2342 [U] ❌ 1VQ8_S:57 no longer at interface
S:57 [THR] 0:1446 [U] U:73 [GLN] A:2371 [U] ❌ 1VQ8_S:57 no longer at interface
S:61 [GLU] 0:1445 [G] U:92 [TYR] A:2370 [A] ❌ 1VQ8_S:61 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal proteins S24e, L23 and L15e 0.91 3.54 0.14 0.72 0.95 0.62 0.59 0.64 0.60 0.26 0.50


Other pairs involving 1VQ8_S_0 or 7OF0_U_A

Total number of entries: 12

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
4Y4O_1X_1A 7OF0_U_A 0.49 0.94 3.88 0.15 Ribosomal proteins S24e, L23 and L15e Bacterial large subunit ribosomal RNA compare
6S0Z_R_A 7OF0_U_A 0.58 0.93 4.12 0.05 Ribosomal proteins S24e, L23 and L15e Bacterial large subunit ribosomal RNA compare
1VQ8_S_0 6S0Z_R_A 0.72 0.93 1.29 0.34 Ribosomal proteins S24e, L23 and L15e compare
1VQ8_S_0 7RYG_S_A 0.49 0.91 2.81 0.24 Ribosomal proteins S24e, L23 and L15e compare
1VQ8_S_0 7O7Y_BX_B5,B8 0.81 0.94 1.11 0.41 Ribosomal proteins S24e, L23 and L15e compare
1VQ8_S_0 1YHQ_S_0 1.00 1.0 0.15 1.0 Ribosomal proteins S24e, L23 and L15e Archaeal large subunit ribosomal RNA compare
1VQ8_S_0 7OF0_U_A 0.64 0.91 3.54 0.14 Ribosomal proteins S24e, L23 and L15e compare
1VQ8_S_0 4Y4O_1X_1A 0.81 0.93 1.76 0.38 Ribosomal proteins S24e, L23 and L15e compare
1VQ8_S_0 7K00_s_a 0.69 0.9 2.2 0.31 Ribosomal proteins S24e, L23 and L15e compare
1VQ8_S_0 6AZ3_V_1,7 0.70 0.7 0.63 0.36 Ribosomal proteins S24e, L23 and L15e compare
1VQ8_S_0 6AZ3_V_2 0.89 0.8 0.88 0.27 Ribosomal proteins S24e, L23 and L15e compare
1YHQ_S_0 7OF0_U_A 0.64 0.91 3.52 0.14 Ribosomal proteins S24e, L23 and L15e compare