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All interfaces > All interologs > Interface groups > group128 > 1VQ8_S_0 vs 7RYG_S_A

Interface analysis


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Common contacts -

1VQ8_S
1VQ8_0
7RYG_S
7RYG_A
Conserved?
S:55 [GLN] 0:1446 [U] S:60 [THR] A:1335 [U] ✔
S:55 [GLN] 0:1447 [U] S:60 [THR] A:1336 [G] ✔
S:52 [VAL] 0:1448 [A] S:57 [VAL] A:1337 [A] ✔
S:56 [ASN] 0:1675 [C] S:61 [ILE] A:1598 [C] ✔
S:56 [ASN] 0:1676 [G] S:61 [ILE] A:1599 [G] ✔
S:56 [ASN] 0:1677 [U] S:61 [ILE] A:1600 [U] ✔
S:51 [GLN] 0:1507 [C] S:56 [LYS] A:1393 [C] ✔
S:51 [GLN] 0:1508 [C] S:56 [LYS] A:1394 [C] ✔
S:11 [THR] 0:1444 [G] S:15 [PHE] A:1333 [G] ✔
S:53 [ASN] 0:1447 [U] S:58 [ASN] A:1336 [G] ✔
S:53 [ASN] 0:1448 [A] S:58 [ASN] A:1337 [A] ✔
S:53 [ASN] 0:1506 [U] S:58 [ASN] A:1392 [U] ✔
S:53 [ASN] 0:1507 [C] S:58 [ASN] A:1393 [C] ✔
S:12 [GLU] 0:1444 [G] S:16 [SER] A:1333 [G] ✔
S:32 [ALA] 0:1674 [C] S:37 [ALA] A:1597 [U] ✔
S:17 [ASP] 0:1447 [U] S:22 [LEU] A:1336 [G] ✔
S:33 [SER] 0:1673 [U] S:38 [THR] A:1596 [A] ✔
S:33 [SER] 0:1674 [C] S:38 [THR] A:1597 [U] ✔
S:13 [LYS] 0:1445 [G] S:18 [LYS] A:1334 [G] ✔
S:13 [LYS] 0:1446 [U] S:18 [LYS] A:1335 [U] ✔
S:13 [LYS] 0:1447 [U] S:18 [LYS] A:1336 [G] ✔
S:13 [LYS] 0:1502 [A] S:18 [LYS] A:1388 [A] ✔
S:13 [LYS] 0:1503 [U] S:18 [LYS] A:1389 [U] ✔
S:54 [THR] 0:1447 [U] S:59 [THR] A:1336 [G] ✔
S:54 [THR] 0:1448 [A] S:59 [THR] A:1337 [A] ✔
S:54 [THR] 0:1675 [C] S:59 [THR] A:1598 [C] ✔
S:34 [LYS] 0:1448 [A] S:39 [LYS] A:1337 [A] ✔
S:34 [LYS] 0:1673 [U] S:39 [LYS] A:1596 [A] ✔
S:34 [LYS] 0:1674 [C] S:39 [LYS] A:1597 [U] ✔
S:58 [MET] 0:1418 [U] S:63 [LYS] A:1307 [U] ❌ 7RYG_S_A
S:58 [MET] 0:1445 [G] S:63 [LYS] A:1334 [G] ❌ 7RYG_S_A
S:58 [MET] 0:1446 [U] S:63 [LYS] A:1335 [U] ❌ 7RYG_S_A
S:11 [THR] 0:1445 [G] S:15 [PHE] A:1334 [G] ❌ 7RYG_S_A
S:35 [GLY] 0:1673 [U] S:40 [LEU] A:1596 [A] ❌ 7RYG_S_A
S:63 [LYS] 0:1445 [G] S:80 [LYS] A:1334 [G] ❌ 7RYG_S_A
S:63 [LYS] 0:1446 [U] S:80 [LYS] A:1335 [U] ❌ 7RYG_S_A
S:12 [GLU] 0:1501 [A] S:16 [SER] A:1387 [A] ❌ 7RYG_S_A
S:54 [THR] 0:1674 [C] S:59 [THR] A:1597 [U] ❌ 7RYG_S_A
S:12 [GLU] 0:1445 [G] S:16 [SER] A:1334 [G] ❌ 1VQ8_S_0
S:17 [ASP] 0:1507 [C] S:22 [LEU] A:1393 [C] ❌ 1VQ8_S_0
S:29 [ASP] 0:1675 [C] S:35 [ILE] A:1598 [C] ❌ 1VQ8_S_0
S:56 [ASN] 0:1446 [U] S:61 [ILE] A:1335 [U] ❌ 1VQ8_S_0
S:58 [MET] 0:1677 [U] S:63 [LYS] A:1600 [U] ❌ 1VQ8_S_0
S:58 [MET] 0:1676 [G] S:63 [LYS] A:1599 [G] ❌ 1VQ8_S_0
S:63 [LYS] 0:1675 [C] S:80 [LYS] A:1598 [C] ❌ 1VQ8_S_0
S:63 [LYS] 0:1674 [C] S:80 [LYS] A:1597 [U] ❌ 1VQ8_S_0
S:58 [MET] 0:1417 [G] S:63 [LYS] A:1306 [G] ❌ 7RYG_A:1306 no longer at interface
S:29 [ASP] 0:67 [A] S:35 [ILE] A:78 [A] ❌ 7RYG_A:78 no longer at interface
S:34 [LYS] 0:1449 [G] S:39 [LYS] A:1338 [G] ❌ 7RYG_A:1338 no longer at interface
S:31 [ARG] 0:67 [A] S:36 [ASN] A:78 [A] ❌ 7RYG_S:36, 7RYG_A:78 no longer at interface
S:31 [ARG] 0:109 [U] S:36 [ASN] A:121 [U] ❌ 7RYG_S:36, 7RYG_A:121 no longer at interface
S:60 [GLY] 0:54 [G] S:77 [SER] A:65 [G] ❌ 1VQ8_S:60, 1VQ8_0:54 no longer at interface
S:61 [GLU] 0:54 [G] S:78 [ASP] A:65 [G] ❌ 1VQ8_S:61, 1VQ8_0:54 no longer at interface
S:65 [VAL] 0:1447 [U] S:82 [ALA] A:1336 [G] ❌ 7RYG_S:82 no longer at interface
S:23 [LYS] 0:1507 [C] S:29 [GLN] A:1393 [C] ❌ 7RYG_S:29 no longer at interface
S:23 [LYS] 0:1508 [C] S:29 [GLN] A:1394 [C] ❌ 7RYG_S:29 no longer at interface
S:67 [ARG] 0:1508 [C] S:84 [VAL] A:1394 [C] ❌ 7RYG_S:84 no longer at interface
S:9 [HIS] 0:1444 [G] S:13 [PRO] A:1333 [G] ❌ 7RYG_S:13 no longer at interface
S:9 [HIS] 0:1445 [G] S:13 [PRO] A:1334 [G] ❌ 7RYG_S:13 no longer at interface
S:14 [ALA] 0:1445 [G] S:19 [ALA] A:1334 [G] ❌ 7RYG_S:19 no longer at interface
S:21 [GLN] 0:1507 [C] S:26 [ALA] A:1393 [C] ❌ 7RYG_S:26 no longer at interface
S:21 [GLN] 0:1508 [C] S:26 [ALA] A:1394 [C] ❌ 7RYG_S:26 no longer at interface
S:62 [LYS] 0:1674 [C] S:79 [VAL] A:1597 [U] ❌ 7RYG_S:79 no longer at interface
S:62 [LYS] 0:1675 [C] S:79 [VAL] A:1598 [C] ❌ 7RYG_S:79 no longer at interface
S:25 [GLN] 0:1445 [G] S:31 [PHE] A:1334 [G] ❌ 7RYG_S:31 no longer at interface
S:10 [VAL] 0:1445 [G] S:14 [VAL] A:1334 [G] ❌ 1VQ8_S:10 no longer at interface
S:22 [ASN] 0:1447 [U] S:28 [VAL] A:1336 [G] ❌ 1VQ8_S:22 no longer at interface
S:57 [THR] 0:1445 [G] S:62 [THR] A:1334 [G] ❌ 1VQ8_S:57 no longer at interface
S:57 [THR] 0:1446 [U] S:62 [THR] A:1335 [U] ❌ 1VQ8_S:57 no longer at interface
S:64 [ALA] 0:1445 [G] S:81 [LYS] A:1334 [G] ❌ 1VQ8_S:64 no longer at interface
S:64 [ALA] 0:1446 [U] S:81 [LYS] A:1335 [U] ❌ 1VQ8_S:64 no longer at interface
S:66 [VAL] 0:1445 [G] S:83 [TYR] A:1334 [G] ❌ 1VQ8_S:66 no longer at interface
S:66 [VAL] 0:1447 [U] S:83 [TYR] A:1336 [G] ❌ 1VQ8_S:66 no longer at interface
S:66 [VAL] 0:1446 [U] S:83 [TYR] A:1335 [U] ❌ 1VQ8_S:66 no longer at interface
S:68 [LEU] 0:1447 [U] S:85 [THR] A:1336 [G] ❌ 1VQ8_S:68 no longer at interface
S:68 [LEU] 0:1508 [C] S:85 [THR] A:1394 [C] ❌ 1VQ8_S:68 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal proteins S24e, L23 and L15e 0.91 2.81 0.24 0.83 0.92 0.59 0.82 0.49 0.31 0.24 0.64


Other pairs involving 1VQ8_S_0 or 7RYG_S_A

Total number of entries: 14

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1VQ8_S_0 1YHQ_S_0 1.00 1.0 0.15 1.0 Ribosomal proteins S24e, L23 and L15e Archaeal large subunit ribosomal RNA compare
1VQ8_S_0 4Y4O_1X_1A 0.81 0.93 1.76 0.38 Ribosomal proteins S24e, L23 and L15e compare
1VQ8_S_0 6AZ3_V_1,7 0.70 0.7 0.63 0.36 Ribosomal proteins S24e, L23 and L15e compare
1VQ8_S_0 6AZ3_V_2 0.89 0.8 0.88 0.27 Ribosomal proteins S24e, L23 and L15e compare
1VQ8_S_0 6S0Z_R_A 0.72 0.93 1.29 0.34 Ribosomal proteins S24e, L23 and L15e compare
1VQ8_S_0 7K00_s_a 0.69 0.9 2.2 0.31 Ribosomal proteins S24e, L23 and L15e compare
1VQ8_S_0 7O7Y_BX_B5,B8 0.81 0.94 1.11 0.41 Ribosomal proteins S24e, L23 and L15e compare
1VQ8_S_0 7OF0_U_A 0.64 0.91 3.54 0.14 Ribosomal proteins S24e, L23 and L15e compare
4Y4O_1X_1A 7RYG_S_A 0.60 0.96 3.01 0.51 Ribosomal proteins S24e, L23 and L15e Bacterial large subunit ribosomal RNA compare
6AZ3_V_2 7RYG_S_A 0.70 0.79 3.28 0.33 Ribosomal proteins S24e, L23 and L15e compare
6S0Z_R_A 7RYG_S_A 0.74 0.98 1.83 0.31 Ribosomal proteins S24e, L23 and L15e Bacterial large subunit ribosomal RNA compare
1VQ8_S_0 7RYG_S_A 0.49 0.91 2.81 0.24 Ribosomal proteins S24e, L23 and L15e compare
6AZ3_V_1,7 7RYG_S_A 0.43 0.63 2.88 0.2 Ribosomal proteins S24e, L23 and L15e compare
1YHQ_S_0 7RYG_S_A 0.49 0.91 2.85 0.24 Ribosomal proteins S24e, L23 and L15e compare