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All interfaces > All interologs > Interface groups > group128 > 1YHQ_S_0 vs 7O7Y_BX_B5,B8

Interface analysis


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Common contacts -

1YHQ_S
1YHQ_0
7O7Y_BX
7O7Y_B5,B8
Conserved?
S:65 [VAL] 0:1447 [U] BX:137 [TYR] B5:2280 [C] ✔
S:55 [GLN] 0:1446 [U] BX:127 [LEU] B5:2279 [U] ✔
S:55 [GLN] 0:1447 [U] BX:127 [LEU] B5:2280 [C] ✔
S:58 [MET] 0:1418 [U] BX:130 [PRO] B5:2251 [U] ✔
S:58 [MET] 0:1445 [G] BX:130 [PRO] B5:2278 [G] ✔
S:58 [MET] 0:1446 [U] BX:130 [PRO] B5:2279 [U] ✔
S:52 [VAL] 0:1448 [A] BX:124 [VAL] B5:2281 [A] ✔
S:56 [ASN] 0:1675 [C] BX:128 [ILE] B5:2623 [C] ✔
S:56 [ASN] 0:1676 [G] BX:128 [ILE] B5:2624 [G] ✔
S:56 [ASN] 0:1677 [U] BX:128 [ILE] B5:2625 [U] ✔
S:67 [ARG] 0:1508 [C] BX:139 [ARG] B5:2376 [C] ✔
S:51 [GLN] 0:1507 [C] BX:123 [LYS] B5:2375 [C] ✔
S:51 [GLN] 0:1508 [C] BX:123 [LYS] B5:2376 [C] ✔
S:11 [THR] 0:1444 [G] BX:83 [THR] B5:2277 [G] ✔
S:11 [THR] 0:1445 [G] BX:83 [THR] B5:2278 [G] ✔
S:9 [HIS] 0:1445 [G] BX:81 [LEU] B5:2278 [G] ✔
S:35 [GLY] 0:1673 [U] BX:107 [HIS] B5:2621 [G] ✔
S:53 [ASN] 0:1447 [U] BX:125 [ASN] B5:2280 [C] ✔
S:53 [ASN] 0:1448 [A] BX:125 [ASN] B5:2281 [A] ✔
S:53 [ASN] 0:1506 [U] BX:125 [ASN] B5:2374 [C] ✔
S:53 [ASN] 0:1507 [C] BX:125 [ASN] B5:2375 [C] ✔
S:63 [LYS] 0:1445 [G] BX:135 [LYS] B5:2278 [G] ✔
S:63 [LYS] 0:1446 [U] BX:135 [LYS] B5:2279 [U] ✔
S:12 [GLU] 0:1501 [A] BX:84 [GLU] B5:2369 [C] ✔
S:14 [ALA] 0:1445 [G] BX:86 [ALA] B5:2278 [G] ✔
S:30 [ASP] 0:1675 [C] BX:102 [VAL] B5:2623 [C] ✔
S:32 [ALA] 0:1674 [C] BX:104 [ALA] B5:2622 [C] ✔
S:21 [GLN] 0:1507 [C] BX:93 [ASN] B5:2375 [C] ✔
S:21 [GLN] 0:1508 [C] BX:93 [ASN] B5:2376 [C] ✔
S:62 [LYS] 0:1674 [C] BX:134 [LYS] B5:2622 [C] ✔
S:62 [LYS] 0:1675 [C] BX:134 [LYS] B5:2623 [C] ✔
S:17 [ASP] 0:1447 [U] BX:89 [LYS] B5:2280 [C] ✔
S:33 [SER] 0:1673 [U] BX:105 [ASN] B5:2621 [G] ✔
S:33 [SER] 0:1674 [C] BX:105 [ASN] B5:2622 [C] ✔
S:13 [LYS] 0:1445 [G] BX:85 [SER] B5:2278 [G] ✔
S:13 [LYS] 0:1502 [A] BX:85 [SER] B5:2370 [A] ✔
S:54 [THR] 0:1447 [U] BX:126 [THR] B5:2280 [C] ✔
S:54 [THR] 0:1448 [A] BX:126 [THR] B5:2281 [A] ✔
S:54 [THR] 0:1674 [C] BX:126 [THR] B5:2622 [C] ✔
S:54 [THR] 0:1675 [C] BX:126 [THR] B5:2623 [C] ✔
S:34 [LYS] 0:1448 [A] BX:106 [LYS] B5:2281 [A] ✔
S:34 [LYS] 0:1449 [G] BX:106 [LYS] B5:2282 [G] ✔
S:34 [LYS] 0:1673 [U] BX:106 [LYS] B5:2621 [G] ✔
S:34 [LYS] 0:1674 [C] BX:106 [LYS] B5:2622 [C] ✔
S:9 [HIS] 0:1444 [G] BX:81 [LEU] B5:2277 [G] ❌ 7O7Y_BX_B5,B8
S:12 [GLU] 0:1444 [G] BX:84 [GLU] B5:2277 [G] ❌ 7O7Y_BX_B5,B8
S:12 [GLU] 0:1502 [A] BX:84 [GLU] B5:2370 [A] ❌ 7O7Y_BX_B5,B8
S:13 [LYS] 0:1446 [U] BX:85 [SER] B5:2279 [U] ❌ 7O7Y_BX_B5,B8
S:13 [LYS] 0:1447 [U] BX:85 [SER] B5:2280 [C] ❌ 7O7Y_BX_B5,B8
S:56 [ASN] 0:1446 [U] BX:128 [ILE] B5:2279 [U] ❌ 1YHQ_S_0
S:65 [VAL] 0:1445 [G] BX:137 [TYR] B5:2278 [G] ❌ 1YHQ_S_0
S:65 [VAL] 0:1446 [U] BX:137 [TYR] B5:2279 [U] ❌ 1YHQ_S_0
S:13 [LYS] 0:1501 [A] BX:85 [SER] B5:2369 [C] ❌ 1YHQ_S_0
S:13 [LYS] 0:1444 [G] BX:85 [SER] B5:2277 [G] ❌ 1YHQ_S_0
S:17 [ASP] 0:1507 [C] BX:89 [LYS] B5:2375 [C] ❌ 1YHQ_S_0
S:58 [MET] 0:1417 [G] BX:130 [PRO] B5:2250 [G] ❌ 7O7Y_B5:2250 no longer at interface
S:13 [LYS] 0:1503 [U] BX:85 [SER] B5:2371 [G] ❌ 7O7Y_B5:2371 no longer at interface
S:35 [GLY] 0:1672 [G] BX:107 [HIS] B5:2620 [G] ❌ 1YHQ_0:1672 no longer at interface
S:35 [GLY] 0:1671 [U] BX:107 [HIS] B5:2619 [G] ❌ 1YHQ_0:1671 no longer at interface
S:67 [ARG] 0:1509 [U] BX:139 [ARG] B5:2377 [C] ❌ 1YHQ_0:1509 no longer at interface
S:23 [LYS] 0:1507 [C] BX:95 [THR] B5:2375 [C] ❌ 7O7Y_BX:95 no longer at interface
S:23 [LYS] 0:1508 [C] BX:95 [THR] B5:2376 [C] ❌ 7O7Y_BX:95 no longer at interface
S:25 [GLN] 0:1445 [G] BX:97 [VAL] B5:2278 [G] ❌ 7O7Y_BX:97 no longer at interface
S:57 [THR] 0:1445 [G] BX:129 [ARG] B5:2278 [G] ❌ 1YHQ_S:57 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal proteins S24e, L23 and L15e 0.94 1.03 0.41 0.96 0.94 0.9 0.77 0.81 0.72 0.36 0.45


Other pairs involving 1YHQ_S_0 or 7O7Y_BX_B5,B8

Total number of entries: 14

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
4Y4O_1X_1A 7O7Y_BX_B5,B8 0.73 0.89 1.46 0.24 Ribosomal proteins S24e, L23 and L15e compare
6AZ3_V_2 7O7Y_BX_B5,B8 0.86 0.91 1.06 0.53 Ribosomal proteins S24e, L23 and L15e Eukaryotic large subunit ribosomal RNA compare
6S0Z_R_A 7O7Y_BX_B5,B8 0.67 0.89 1.71 0.19 Ribosomal proteins S24e, L23 and L15e compare
1VQ8_S_0 7O7Y_BX_B5,B8 0.81 0.94 1.11 0.41 Ribosomal proteins S24e, L23 and L15e compare
1VQ8_S_0 1YHQ_S_0 1.00 1.0 0.15 1.0 Ribosomal proteins S24e, L23 and L15e Archaeal large subunit ribosomal RNA compare
6AZ3_V_1,7 7O7Y_BX_B5,B8 0.62 0.92 2.44 0.33 Ribosomal proteins S24e, L23 and L15e 5.8S ribosomal RNA & Eukaryotic large subunit ribosomal RNA compare
1YHQ_S_0 7O7Y_BX_B5,B8 0.81 0.94 1.03 0.41 Ribosomal proteins S24e, L23 and L15e compare
1YHQ_S_0 7RYG_S_A 0.49 0.91 2.85 0.24 Ribosomal proteins S24e, L23 and L15e compare
1YHQ_S_0 7OF0_U_A 0.64 0.91 3.52 0.14 Ribosomal proteins S24e, L23 and L15e compare
1YHQ_S_0 4Y4O_1X_1A 0.80 0.93 1.75 0.38 Ribosomal proteins S24e, L23 and L15e compare
1YHQ_S_0 6AZ3_V_1,7 0.70 0.7 0.6 0.36 Ribosomal proteins S24e, L23 and L15e compare
1YHQ_S_0 6AZ3_V_2 0.89 0.8 0.81 0.27 Ribosomal proteins S24e, L23 and L15e compare
1YHQ_S_0 7K00_s_a 0.68 0.9 2.28 0.31 Ribosomal proteins S24e, L23 and L15e compare
1YHQ_S_0 6S0Z_R_A 0.72 0.93 1.34 0.34 Ribosomal proteins S24e, L23 and L15e compare