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All interfaces > All interologs > Interface groups > group128 > 4Y4O_1X_1A vs 7O7Y_BX_B5,B8

Interface analysis


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Common contacts -

4Y4O_1X
4Y4O_1A
7O7Y_BX
7O7Y_B5,B8
Conserved?
1X:60 [ARG] 1A:1358 [U] BX:130 [PRO] B5:2251 [U] ✔
1X:36 [LYS] 1A:1388 [A] BX:106 [LYS] B5:2281 [A] ✔
1X:36 [LYS] 1A:1389 [G] BX:106 [LYS] B5:2282 [G] ✔
1X:36 [LYS] 1A:1644 [C] BX:106 [LYS] B5:2621 [G] ✔
1X:36 [LYS] 1A:1645 [C] BX:106 [LYS] B5:2622 [C] ✔
1X:16 [LYS] 1A:1385 [G] BX:85 [SER] B5:2278 [G] ✔
1X:16 [LYS] 1A:1439 [A] BX:85 [SER] B5:2370 [A] ✔
1X:14 [SER] 1A:1384 [G] BX:83 [THR] B5:2277 [G] ✔
1X:14 [SER] 1A:1385 [G] BX:83 [THR] B5:2278 [G] ✔
1X:17 [ALA] 1A:1385 [G] BX:86 [ALA] B5:2278 [G] ✔
1X:80 [ILE] 1A:1387 [U] BX:137 [TYR] B5:2280 [C] ✔
1X:57 [LEU] 1A:1386 [U] BX:127 [LEU] B5:2279 [U] ✔
1X:57 [LEU] 1A:1387 [U] BX:127 [LEU] B5:2280 [C] ✔
1X:82 [GLN] 1A:1445 [C] BX:139 [ARG] B5:2376 [C] ✔
1X:53 [LYS] 1A:1444 [C] BX:123 [LYS] B5:2375 [C] ✔
1X:53 [LYS] 1A:1445 [C] BX:123 [LYS] B5:2376 [C] ✔
1X:12 [VAL] 1A:1385 [G] BX:81 [LEU] B5:2278 [G] ✔
1X:32 [PRO] 1A:1646 [C] BX:102 [VAL] B5:2623 [C] ✔
1X:35 [THR] 1A:1644 [C] BX:105 [ASN] B5:2621 [G] ✔
1X:35 [THR] 1A:1645 [C] BX:105 [ASN] B5:2622 [C] ✔
1X:34 [ALA] 1A:1645 [C] BX:104 [ALA] B5:2622 [C] ✔
1X:78 [LYS] 1A:1385 [G] BX:135 [LYS] B5:2278 [G] ✔
1X:78 [LYS] 1A:1386 [U] BX:135 [LYS] B5:2279 [U] ✔
1X:23 [GLU] 1A:1444 [C] BX:93 [ASN] B5:2375 [C] ✔
1X:23 [GLU] 1A:1445 [C] BX:93 [ASN] B5:2376 [C] ✔
1X:15 [GLU] 1A:1438 [A] BX:84 [GLU] B5:2369 [C] ✔
1X:58 [HIS] 1A:1386 [U] BX:128 [ILE] B5:2279 [U] ✔
1X:58 [HIS] 1A:1646 [C] BX:128 [ILE] B5:2623 [C] ✔
1X:58 [HIS] 1A:1647 [G] BX:128 [ILE] B5:2624 [G] ✔
1X:77 [LYS] 1A:1645 [C] BX:134 [LYS] B5:2622 [C] ✔
1X:77 [LYS] 1A:1646 [C] BX:134 [LYS] B5:2623 [C] ✔
1X:54 [VAL] 1A:1388 [A] BX:124 [VAL] B5:2281 [A] ✔
1X:37 [THR] 1A:1643 [A] BX:107 [HIS] B5:2620 [G] ✔
1X:37 [THR] 1A:1644 [C] BX:107 [HIS] B5:2621 [G] ✔
1X:56 [THR] 1A:1387 [U] BX:126 [THR] B5:2280 [C] ✔
1X:56 [THR] 1A:1388 [A] BX:126 [THR] B5:2281 [A] ✔
1X:56 [THR] 1A:1645 [C] BX:126 [THR] B5:2622 [C] ✔
1X:56 [THR] 1A:1646 [C] BX:126 [THR] B5:2623 [C] ✔
1X:55 [ASN] 1A:1387 [U] BX:125 [ASN] B5:2280 [C] ✔
1X:55 [ASN] 1A:1388 [A] BX:125 [ASN] B5:2281 [A] ✔
1X:55 [ASN] 1A:1443 [U] BX:125 [ASN] B5:2374 [C] ✔
1X:55 [ASN] 1A:1444 [C] BX:125 [ASN] B5:2375 [C] ✔
1X:76 [ARG] 1A:1384 [G] BX:133 [GLU] B5:2277 [G] ❌ 7O7Y_BX_B5,B8
1X:16 [LYS] 1A:1386 [U] BX:85 [SER] B5:2279 [U] ❌ 7O7Y_BX_B5,B8
1X:16 [LYS] 1A:1387 [U] BX:85 [SER] B5:2280 [C] ❌ 7O7Y_BX_B5,B8
1X:53 [LYS] 1A:1388 [A] BX:123 [LYS] B5:2281 [A] ❌ 7O7Y_BX_B5,B8
1X:53 [LYS] 1A:1389 [G] BX:123 [LYS] B5:2282 [G] ❌ 7O7Y_BX_B5,B8
1X:58 [HIS] 1A:1645 [C] BX:128 [ILE] B5:2622 [C] ❌ 7O7Y_BX_B5,B8
1X:37 [THR] 1A:1642 [A] BX:107 [HIS] B5:2619 [G] ❌ 4Y4O_1X_1A
1X:60 [ARG] 1A:1385 [G] BX:130 [PRO] B5:2278 [G] ❌ 4Y4O_1X_1A
1X:60 [ARG] 1A:1386 [U] BX:130 [PRO] B5:2279 [U] ❌ 4Y4O_1X_1A
1X:80 [ILE] 1A:1385 [G] BX:137 [TYR] B5:2278 [G] ❌ 4Y4O_1X_1A
1X:80 [ILE] 1A:1386 [U] BX:137 [TYR] B5:2279 [U] ❌ 4Y4O_1X_1A
1X:16 [LYS] 1A:1438 [A] BX:85 [SER] B5:2369 [C] ❌ 4Y4O_1X_1A
1X:16 [LYS] 1A:1384 [G] BX:85 [SER] B5:2277 [G] ❌ 4Y4O_1X_1A
1X:60 [ARG] 1A:1357 [G] BX:130 [PRO] B5:2250 [G] ❌ 7O7Y_B5:2250 no longer at interface
1X:16 [LYS] 1A:1440 [U] BX:85 [SER] B5:2371 [G] ❌ 7O7Y_B5:2371 no longer at interface
1X:58 [HIS] 1A:1648 [U] BX:128 [ILE] B5:2625 [U] ❌ 4Y4O_1A:1648 no longer at interface
1X:82 [GLN] 1A:1446 [G] BX:139 [ARG] B5:2377 [C] ❌ 4Y4O_1A:1446 no longer at interface
1X:29 [TRP] 1A:1385 [G] BX:99 [ILE] B5:2278 [G] ❌ 7O7Y_BX:99 no longer at interface
1X:13 [LEU] 1A:1384 [G] BX:82 [THR] B5:2277 [G] ❌ 7O7Y_BX:82 no longer at interface
1X:25 [LYS] 1A:1444 [C] BX:95 [THR] B5:2375 [C] ❌ 7O7Y_BX:95 no longer at interface
1X:25 [LYS] 1A:1445 [C] BX:95 [THR] B5:2376 [C] ❌ 7O7Y_BX:95 no longer at interface
1X:40 [LYS] 1A:1642 [A] BX:110 [LYS] B5:2619 [G] ❌ 7O7Y_BX:110 no longer at interface
1X:40 [LYS] 1A:1643 [A] BX:110 [LYS] B5:2620 [G] ❌ 7O7Y_BX:110 no longer at interface
1X:50 [LYS] 1A:1642 [A] BX:120 [ASP] B5:2619 [G] ❌ 7O7Y_BX:120 no longer at interface
1X:59 [VAL] 1A:1385 [G] BX:129 [ARG] B5:2278 [G] ❌ 4Y4O_1X:59 no longer at interface
1X:20 [GLY] 1A:1387 [U] BX:89 [LYS] B5:2280 [C] ❌ 4Y4O_1X:20 no longer at interface
1X:20 [GLY] 1A:1444 [C] BX:89 [LYS] B5:2375 [C] ❌ 4Y4O_1X:20 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal proteins S24e, L23 and L15e 0.89 1.46 0.24 0.78 0.89 0.55 0.42 0.73 0.75 0.38 0.52


Other pairs involving 4Y4O_1X_1A or 7O7Y_BX_B5,B8

Total number of entries: 13

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
4Y4O_1X_1A 7RYG_S_A 0.60 0.96 3.01 0.51 Ribosomal proteins S24e, L23 and L15e Bacterial large subunit ribosomal RNA compare
4Y4O_1X_1A 7O7Y_BX_B5,B8 0.73 0.89 1.46 0.24 Ribosomal proteins S24e, L23 and L15e compare
4Y4O_1X_1A 7OF0_U_A 0.49 0.94 3.88 0.15 Ribosomal proteins S24e, L23 and L15e Bacterial large subunit ribosomal RNA compare
4Y4O_1X_1A 6S0Z_R_A 0.73 0.97 1.59 0.43 Ribosomal proteins S24e, L23 and L15e Bacterial large subunit ribosomal RNA compare
4Y4O_1X_1A 6AZ3_V_2 0.97 0.82 1.6 0.4 Ribosomal proteins S24e, L23 and L15e compare
4Y4O_1X_1A 7K00_s_a 0.61 0.96 1.72 0.49 Ribosomal proteins S24e, L23 and L15e Bacterial large subunit ribosomal RNA compare
6AZ3_V_2 7O7Y_BX_B5,B8 0.86 0.91 1.06 0.53 Ribosomal proteins S24e, L23 and L15e Eukaryotic large subunit ribosomal RNA compare
6S0Z_R_A 7O7Y_BX_B5,B8 0.67 0.89 1.71 0.19 Ribosomal proteins S24e, L23 and L15e compare
1VQ8_S_0 7O7Y_BX_B5,B8 0.81 0.94 1.11 0.41 Ribosomal proteins S24e, L23 and L15e compare
1VQ8_S_0 4Y4O_1X_1A 0.81 0.93 1.76 0.38 Ribosomal proteins S24e, L23 and L15e compare
6AZ3_V_1,7 7O7Y_BX_B5,B8 0.62 0.92 2.44 0.33 Ribosomal proteins S24e, L23 and L15e 5.8S ribosomal RNA & Eukaryotic large subunit ribosomal RNA compare
1YHQ_S_0 7O7Y_BX_B5,B8 0.81 0.94 1.03 0.41 Ribosomal proteins S24e, L23 and L15e compare
1YHQ_S_0 4Y4O_1X_1A 0.80 0.93 1.75 0.38 Ribosomal proteins S24e, L23 and L15e compare