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All interfaces > All interologs > Interface groups > group128 > 7RYG_S_A

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Licorice
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Licorice
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Chain
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Conservation*

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Contacts -

7RYG_S
7RYG_A
Distance
Base Pair
Hbond nuc:res
Base Stacking
Residue conservation
S:1 [MET] A:149 [G] 4.01 A:144 [U] 67.19
S:1 [MET] A:150 [G] 3.96 A:143 [C] 67.19
S:2 [ASN] A:150 [G] 4.24 A:143 [C] 45.62
S:4 [GLU] A:79 [A] 3.27 44.8
S:14 [VAL] A:1334 [G] 4.43 54.89
S:15 [PHE] A:1333 [G] 4.55 A:1309 [C] 70.98
S:16 [SER] A:1333 [G] 3.6 A:1309 [C] 93.57
S:16 [SER] A:1334 [G] 3.0 93.57
S:17 [GLU] A:1387 [A] 3.06 base:SC 99.0
S:17 [GLU] A:1388 [A] 4.35 99.0
S:18 [LYS] A:1334 [G] 3.75 97.04
S:18 [LYS] A:1335 [U] 2.87 A:1307 [U] 97.04
S:18 [LYS] A:1336 [G] 3.19 base:SC 97.04
S:18 [LYS] A:1388 [A] 4.51 97.04
S:18 [LYS] A:1389 [U] 3.52 base:SC 97.04
S:22 [LEU] A:1336 [G] 3.56 29.88
S:22 [LEU] A:1393 [C] 4.98 A:1384 [G] 29.88
S:28 [VAL] A:1336 [G] 4.84 52.72
S:35 [ILE] A:1598 [C] 4.3 A:1341 [G] 30.8
S:37 [ALA] A:1597 [U] 4.52 A:1342 [A] 89.22
S:38 [THR] A:1596 [A] 4.38 A:1343 [C] 75.99
S:38 [THR] A:1597 [U] 3.39 A:1342 [A] 75.99
S:39 [LYS] A:1337 [A] 2.87 A:1600 [U] 98.81
S:39 [LYS] A:1596 [A] 4.56 A:1343 [C] 98.81
S:39 [LYS] A:1597 [U] 3.01 A:1342 [A] 98.81
S:40 [LEU] A:148 [A] 4.14 44.16
S:40 [LEU] A:149 [G] 3.65 A:144 [U] 44.16
S:56 [LYS] A:1393 [C] 3.38 A:1384 [G] 43.33
S:56 [LYS] A:1394 [C] 3.14 A:1383 [G] 43.33
S:57 [VAL] A:1337 [A] 4.46 A:1600 [U] 93.33
S:58 [ASN] A:1336 [G] 2.88 sugar:SC 78.63
S:58 [ASN] A:1337 [A] 3.62 A:1600 [U] 78.63
S:58 [ASN] A:1392 [U] 4.56 78.63
S:58 [ASN] A:1393 [C] 3.5 A:1384 [G] 78.63
S:59 [THR] A:1336 [G] 3.27 84.61
S:59 [THR] A:1337 [A] 3.3 A:1600 [U] 84.61
S:59 [THR] A:1598 [C] 4.87 A:1341 [G] 84.61
S:60 [THR] A:1335 [U] 2.28 A:1307 [U] sugar:SC 52.88
S:60 [THR] A:1336 [G] 3.44 52.88
S:61 [ILE] A:1335 [U] 4.94 A:1307 [U] 65.69
S:61 [ILE] A:1598 [C] 3.3 A:1341 [G] 65.69
S:61 [ILE] A:1599 [G] 3.26 A:1340 [C] 65.69
S:61 [ILE] A:1600 [U] 4.25 A:1337 [A] 65.69
S:62 [THR] A:1334 [G] 4.46 48.24
S:62 [THR] A:1335 [U] 4.37 A:1307 [U] 48.24
S:63 [LYS] A:1599 [G] 3.08 A:1340 [C] 58.76
S:63 [LYS] A:1600 [U] 3.27 A:1337 [A] 58.76
S:65 [LYS] A:1307 [U] 4.17 A:1335 [U] 90.13
S:65 [LYS] A:1309 [C] 4.6 A:1333 [G] 90.13
S:65 [LYS] A:1332 [G] 4.23 A:1310 [C] 90.13
S:65 [LYS] A:1333 [G] 3.01 A:1309 [C] base:SC 90.13
S:65 [LYS] A:1334 [G] 3.82 90.13
S:66 [THR] A:1307 [U] 3.9 A:1335 [U] 16.23
S:67 [LYS] A:71 [G] 2.85 A:97 [C] sugar:SC 69.65
S:67 [LYS] A:1331 [U] 4.99 A:1311 [A] 69.65
S:68 [ARG] A:1330 [C] 4.2 A:1312 [G] 70.64
S:69 [PHE] A:71 [G] 4.08 A:97 [C] 0.0
S:69 [PHE] A:98 [A] 3.27 0.0
S:72 [THR] A:71 [G] 3.4 A:97 [C] 22.6
S:72 [THR] A:72 [C] 3.21 A:96 [G] sugar:SC 22.6
S:72 [THR] A:455 [C] 4.13 22.6
S:73 [LEU] A:71 [G] 4.29 A:97 [C] 0.19
S:73 [LEU] A:72 [C] 3.98 A:96 [G] 0.19
S:74 [GLY] A:71 [G] 3.49 A:97 [C] 65.72
S:74 [GLY] A:72 [C] 3.72 A:96 [G] 65.72
S:75 [ARG] A:71 [G] 3.93 A:97 [C] 42.89
S:75 [ARG] A:72 [C] 3.59 A:96 [G] 42.89
S:76 [ARG] A:71 [G] 3.67 A:97 [C] 44.35
S:76 [ARG] A:1332 [G] 4.48 A:1310 [C] 44.35
S:77 [SER] A:65 [G] 3.06 A:76 [C] 54.78
S:78 [ASP] A:65 [G] 4.19 A:76 [C] 32.2
S:80 [LYS] A:1597 [U] 4.61 A:1342 [A] 98.14
S:80 [LYS] A:1598 [C] 2.85 A:1341 [G] 98.14
S:81 [LYS] A:1334 [G] 3.64 93.03
S:81 [LYS] A:1335 [U] 2.88 A:1307 [U] 93.03
S:83 [TYR] A:1334 [G] 4.63 69.31
S:83 [TYR] A:1335 [U] 3.02 A:1307 [U] 69.31
S:83 [TYR] A:1336 [G] 3.62 base/AA stacks 69.31
S:85 [THR] A:1336 [G] 4.85 68.43
S:85 [THR] A:1394 [C] 4.98 A:1383 [G] 68.43

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*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)

Properties of this interface

Interolog group ID Structure ID Structure description
 UniProt ID
 		ECOD label(s)
 		RFAM label(s)
 		Is ribosome? RCSB PDB link
group128 7RYG_S_A S: 50s ribosomal protein l23, Acinetobacter baumannii (strain ab0057) (natural) A: 23s ribosomal RNA, Acinetobacter baumannii ab0057 (natural) B7IA37 Ribosomal proteins S24e, L23 and L15e Bacterial large subunit ribosomal RNA ✔

Interologs

Total number of interologs for this interface: 6

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
6S0Z_R_A 7RYG_S_A 0.74 0.98 1.83 0.31 Ribosomal proteins S24e, L23 and L15e Bacterial large subunit ribosomal RNA compare
6AZ3_V_2 7RYG_S_A 0.70 0.79 3.28 0.33 Ribosomal proteins S24e, L23 and L15e compare
6AZ3_V_1,7 7RYG_S_A 0.43 0.63 2.88 0.2 Ribosomal proteins S24e, L23 and L15e compare
4Y4O_1X_1A 7RYG_S_A 0.60 0.96 3.01 0.51 Ribosomal proteins S24e, L23 and L15e Bacterial large subunit ribosomal RNA compare
1YHQ_S_0 7RYG_S_A 0.49 0.91 2.85 0.24 Ribosomal proteins S24e, L23 and L15e compare
1VQ8_S_0 7RYG_S_A 0.49 0.91 2.81 0.24 Ribosomal proteins S24e, L23 and L15e compare