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All interfaces > All interologs > Interface groups > group129 > 4Y4O_1E_1A vs 6AZ3_B_1

Interface analysis


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Licorice
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Common contacts -

4Y4O_1E
4Y4O_1A
6AZ3_B
6AZ3_1
Conserved?
1E:132 [HIS] 1A:791 [G] B:248 [HIS] 1:927 [A2M] ✔
1E:149 [ARG] 1A:1176 [U] B:264 [ARG] 1:1367 [U] ✔
1E:146 [THR] 1A:1176 [U] B:261 [HIS] 1:1367 [U] ✔
1E:147 [PRO] 1A:1176 [U] B:262 [PRO] 1:1367 [U] ✔
1E:132 [HIS] 1A:793 [A] B:248 [HIS] 1:929 [G] ❌ 4Y4O_1E_1A
1E:148 [GLY] 1A:1176 [U] B:263 [ALA] 1:1367 [U] ❌ 4Y4O_1E_1A
1E:132 [HIS] 1A:790 [G] B:248 [HIS] 1:926 [G] ❌ 6AZ3_1:926 no longer at interface
1E:132 [HIS] 1A:792 [G] B:248 [HIS] 1:928 [C] ❌ 6AZ3_1:928 no longer at interface
1E:131 [ALA] 1A:790 [G] B:247 [THR] 1:926 [G] ❌ 6AZ3_B:247, 6AZ3_1:926 no longer at interface
1E:133 [LYS] 1A:792 [G] B:249 [ARG] 1:928 [C] ❌ 6AZ3_B:249, 6AZ3_1:928 no longer at interface
1E:127 [ASP] 1A:789 [G] B:245 [ARG] 1:924 [C] ❌ 4Y4O_1A:789 no longer at interface
1E:149 [ARG] 1A:1177 [G] B:264 [ARG] 1:1368 [G] ❌ 4Y4O_1A:1177 no longer at interface
1E:131 [ALA] 1A:791 [G] B:247 [THR] 1:927 [A2M] ❌ 6AZ3_B:247 no longer at interface
1E:133 [LYS] 1A:791 [G] B:249 [ARG] 1:927 [A2M] ❌ 6AZ3_B:249 no longer at interface
1E:133 [LYS] 1A:793 [A] B:249 [ARG] 1:929 [G] ❌ 6AZ3_B:249 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Alanine racemase-C 0.66 1.78 0.17 0.81 0.7 1.0 0.5 0.61 0.90 0.50 0.82


Other pairs involving 4Y4O_1E_1A or 6AZ3_B_1

Total number of entries: 14

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1YHQ_B_0 4Y4O_1E_1A 0.64 0.9 2.2 0.29 Alanine racemase-C compare
1YHQ_B_0 6AZ3_B_1 0.59 0.77 1.82 0.33 Alanine racemase-C compare
6AZ3_B_1 6S0Z_D_A 0.76 0.67 1.81 0.29 Alanine racemase-C compare
6AZ3_B_1 7RYG_D_A 0.73 0.65 1.88 0.29 Alanine racemase-C compare
6AZ3_B_1 7K00_d_a 0.61 0.66 1.8 0.14 Alanine racemase-C compare
1VQ8_B_0 4Y4O_1E_1A 0.64 0.9 2.32 0.29 Alanine racemase-C compare
1VQ8_B_0 6AZ3_B_1 0.58 0.77 1.75 0.33 Alanine racemase-C compare
4Y4O_1E_1A 6S0Z_D_A 0.88 0.97 1.32 0.54 Alanine racemase-C Bacterial large subunit ribosomal RNA compare
4Y4O_1E_1A 7RYG_D_A 0.89 0.96 1.71 0.58 Alanine racemase-C Bacterial large subunit ribosomal RNA compare
4Y4O_1E_1A 6AZ3_B_4 0.55 0.58 2.75 0.17 Alanine racemase-C compare
4Y4O_1E_1A 7K00_d_a 0.92 0.97 0.69 0.64 Alanine racemase-C Bacterial large subunit ribosomal RNA compare
4Y4O_1E_1A 7OF0_E_A 0.76 0.91 1.65 0.36 Alanine racemase-C Bacterial large subunit ribosomal RNA compare
4Y4O_1E_1A 7O7Y_BB_B5 0.62 0.9 2.62 0.26 Alanine racemase-C compare
4Y4O_1E_1A 6AZ3_B_1 0.61 0.66 1.78 0.17 Alanine racemase-C compare