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All interfaces > All interologs > Interface groups > group13 > 7D8O_A_B

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Licorice
Surface

RNA

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Licorice
Surface

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Chain
Chain (with hetatm)
Chainbow
Hydrophobicity
Electrostatics (surface only)
Conservation*

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Rim - Core

Contacts -

7D8O_A
7D8O_B
Distance
Base Pair
Hbond nuc:res
Base Stacking
Residue conservation
A:15 [LYS] B:-3 [A] 3.55 74.02
A:19 [ASP] B:-3 [A] 2.8 base:BB 49.98
A:19 [ASP] B:-2 [U] 4.45 49.98
A:20 [LYS] B:-3 [A] 3.64 65.21
A:20 [LYS] B:-2 [U] 2.89 base:BB, sugar:SC 65.21
A:21 [VAL] B:-3 [A] 2.9 base:BB 89.09
A:21 [VAL] B:-2 [U] 4.41 89.09
A:22 [PRO] B:-3 [A] 3.88 46.38
A:22 [PRO] B:-2 [U] 3.2 46.38
A:23 [ASN] B:-3 [A] 2.95 base:BB base/AA stacks 44.9
A:23 [ASN] B:-2 [U] 4.58 44.9
A:33 [LYS] B:-3 [A] 3.41 90.04
A:50 [PRO] B:-2 [U] 4.92 98.76
A:52 [THR] B:-3 [A] 3.93 87.94
A:52 [THR] B:-2 [U] 4.27 87.94
A:55 [LYS] B:-3 [A] 3.84 92.34
A:55 [LYS] B:-2 [U] 3.85 92.34
A:57 [TRP] B:-2 [U] 2.75 85.05
A:57 [TRP] B:-1 [U] 3.32 85.05
A:57 [TRP] B:0 [U] 4.34 85.05
A:60 [ASN] B:0 [U] 3.23 base/AA stacks 35.81
A:61 [VAL] B:0 [U] 4.48 76.32
A:61 [VAL] B:12 [U] 4.49 B:22 [U] 76.32
A:62 [LYS] B:0 [U] 3.97 64.52
A:62 [LYS] B:2 [G] 4.94 B:15 [C] 64.52
A:62 [LYS] B:11 [C] 4.39 B:23 [G] 64.52
A:62 [LYS] B:12 [U] 3.82 B:22 [U] 64.52
A:63 [GLU] B:12 [U] 2.92 B:22 [U] 70.78
A:63 [GLU] B:13 [A] 3.55 B:4 [U] 70.78
A:64 [SER] B:1 [A] 2.89 B:16 [U] base:BB 57.46
A:64 [SER] B:2 [G] 4.22 B:15 [C] 57.46
A:64 [SER] B:3 [G] 4.86 B:14 [C] 57.46
A:64 [SER] B:13 [A] 4.78 B:4 [U] 57.46
A:64 [SER] B:14 [C] 3.78 B:3 [G] 57.46
A:64 [SER] B:15 [C] 4.18 B:2 [G] 57.46
A:64 [SER] B:16 [U] 4.52 B:1 [A] 57.46
A:65 [SER] B:0 [U] 4.4 53.38
A:65 [SER] B:1 [A] 2.68 B:16 [U] 53.38
A:66 [PRO] B:1 [A] 3.45 B:16 [U] 46.36
A:67 [ALA] B:1 [A] 3.97 B:16 [U] 81.09
A:68 [PHE] B:0 [U] 4.0 63.16
A:68 [PHE] B:1 [A] 3.45 B:16 [U] 63.16
A:85 [ASN] B:-2 [U] 4.21 80.81
A:87 [LYS] B:-1 [U] 2.89 90.6
A:87 [LYS] B:1 [A] 4.83 B:16 [U] 90.6
A:88 [PHE] B:-2 [U] 3.21 base/AA stacks 90.81
A:88 [PHE] B:-1 [U] 3.4 90.81
A:127 [LYS] B:13 [A] 4.46 B:4 [U] 30.45
A:134 [LEU] B:1 [A] 4.65 B:16 [U] 53.59
A:134 [LEU] B:16 [U] 3.39 B:1 [A] 53.59
A:137 [ASN] B:16 [U] 3.96 B:1 [A] sugar:SC 52.35
A:137 [ASN] B:17 [U] 4.72 52.35
A:138 [LEU] B:1 [A] 3.53 B:16 [U] 39.48
A:138 [LEU] B:16 [U] 3.86 B:1 [A] 39.48
A:141 [GLN] B:17 [U] 4.49 53.04
A:143 [ARG] B:1 [A] 3.48 B:16 [U] 54.48
A:143 [ARG] B:16 [U] 4.22 B:1 [A] 54.48
A:143 [ARG] B:17 [U] 3.74 54.48
A:144 [MET] B:1 [A] 3.64 B:16 [U] 1.32
A:145 [GLN] B:0 [U] 3.91 sugar:SC 34.76
A:145 [GLN] B:1 [A] 2.64 B:16 [U] 34.76
A:146 [GLY] B:-1 [U] 4.67 69.16

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*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)

Properties of this interface

Interolog group ID Structure ID Structure description
 UniProt ID
 		ECOD label(s)
 		RFAM label(s)
 		Is ribosome? RCSB PDB link
group13 7D8O_A_B A: Type iii toxin-antitoxin system toxn/abiq family toxin, Escherichia coli (genetically engineered) B: Antitoxin RNA, Escherichia coli (genetically engineered) SH3 ✘

Interologs

Total number of interologs for this interface: 1

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
4RMO_A_B 7D8O_A_B 0.30 0.63 2.16 0.0 SH3 compare