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All interfaces > All interologs > Interface groups > group130 > 3AVX_A_G,T vs 5F8H_A_B,C

Interface analysis


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Common contacts -

3AVX_A
3AVX_G,T
5F8H_A
5F8H_B,C
Conserved?
A:946 [ASN] T:4115 [U] A:211 [GLY] B:603 [U] ✔
A:946 [ASN] T:4116 [G] A:211 [GLY] B:604 [C] ✔
A:906 [VAL] T:4112 [C] A:159 [LYS] B:600 [G] ✔
A:917 [ALA] T:4112 [C] A:177 [GLU] B:600 [G] ✔
A:905 [THR] T:4111 [A] A:158 [VAL] B:599 [G] ✔
A:851 [GLY] T:4112 [C] A:114 [THR] B:600 [G] ✔
A:851 [GLY] T:4113 [G] A:114 [THR] B:601 [U] ✔
A:918 [ILE] T:4112 [C] A:178 [ALA] B:600 [G] ✔
A:1051 [TYR] T:4114 [A] A:327 [TYR] B:602 [C] ✔
A:1051 [TYR] T:4115 [U] A:327 [TYR] B:603 [U] ✔
A:919 [GLU] T:4112 [C] A:179 [SER] B:600 [G] ✔
A:928 [LEU] T:4113 [G] A:188 [ARG] B:601 [U] ✔
A:928 [LEU] T:4114 [A] A:188 [ARG] B:602 [C] ✔
A:1023 [PHE] T:4113 [G] A:295 [SER] B:601 [U] ✔
A:1023 [PHE] T:4114 [A] A:295 [SER] B:602 [C] ✔
A:850 [GLY] T:4113 [G] A:111 [ASP] B:601 [U] ✔
A:947 [ASP] T:4115 [U] A:212 [CYS] B:603 [U] ✔
A:945 [LEU] T:4114 [A] A:210 [VAL] B:602 [C] ✔
A:945 [LEU] T:4115 [U] A:210 [VAL] B:603 [U] ✔
A:1018 [GLY] T:4112 [C] A:290 [GLY] B:600 [G] ✔
A:1018 [GLY] T:4113 [G] A:290 [GLY] B:601 [U] ✔
A:924 [MET] T:4113 [G] A:184 [SER] B:601 [U] ✔
A:904 [VAL] T:4111 [A] A:157 [TYR] B:599 [G] ✔
A:857 [ASN] T:4111 [A] A:121 [SER] B:599 [G] ✔
A:935 [ARG] T:4114 [A] A:195 [TYR] B:602 [C] ✔
A:1020 [GLY] T:4113 [G] A:292 [SER] B:601 [U] ✔
A:907 [PRO] T:4111 [A] A:160 [ASP] B:599 [G] ✔
A:1019 [ASN] T:4112 [C] A:291 [CYS] B:600 [G] ✔
A:1019 [ASN] T:4113 [G] A:291 [CYS] B:601 [U] ✔
A:852 [ALA] T:4111 [A] A:115 [SER] B:599 [G] ✔
A:852 [ALA] T:4112 [C] A:115 [SER] B:600 [G] ✔
A:852 [ALA] T:4113 [G] A:115 [SER] B:601 [U] ✔
A:849 [SER] T:4113 [G] A:110 [ILE] B:601 [U] ✔
A:849 [SER] T:4114 [A] A:110 [ILE] B:602 [C] ✔
A:1017 [MET] T:4112 [C] A:289 [SER] B:600 [G] ✔
A:916 [ILE] T:4111 [A] A:176 [ILE] B:599 [G] ✔
A:916 [ILE] T:4112 [C] A:176 [ILE] B:600 [G] ✔
A:948 [GLN] T:4115 [U] A:213 [ASN] B:603 [U] ❌ 5F8H_A_B,C
A:906 [VAL] T:4111 [A] A:159 [LYS] B:599 [G] ❌ 5F8H_A_B,C
A:918 [ILE] T:4111 [A] A:178 [ALA] B:599 [G] ❌ 5F8H_A_B,C
A:924 [MET] T:4112 [C] A:184 [SER] B:600 [G] ❌ 5F8H_A_B,C
A:935 [ARG] T:4115 [U] A:195 [TYR] B:603 [U] ❌ 5F8H_A_B,C
A:849 [SER] T:4112 [C] A:110 [ILE] B:600 [G] ❌ 5F8H_A_B,C
A:850 [GLY] T:4114 [A] A:111 [ASP] B:602 [C] ❌ 3AVX_A_G,T
A:862 [HIS] T:4113 [G] A:127 [LYS] B:601 [U] ❌ 3AVX_A_G,T
A:862 [HIS] T:4112 [C] A:127 [LYS] B:600 [G] ❌ 3AVX_A_G,T
A:919 [GLU] T:4113 [G] A:179 [SER] B:601 [U] ❌ 3AVX_A_G,T
A:947 [ASP] T:4116 [G] A:212 [CYS] B:604 [C] ❌ 3AVX_A_G,T
A:948 [GLN] T:4116 [G] A:213 [ASN] B:604 [C] ❌ 3AVX_A_G,T
A:1017 [MET] T:4113 [G] A:289 [SER] B:601 [U] ❌ 3AVX_A_G,T
A:1020 [GLY] T:4114 [A] A:292 [SER] B:602 [C] ❌ 3AVX_A_G,T
A:948 [GLN] T:4117 [G] A:213 [ASN] B:605 [U] ❌ 3AVX_T:4117 no longer at interface
A:1124 [TYR] T:4117 [G] A:420 [LEU] B:605 [U] ❌ 3AVX_A:1124, 3AVX_T:4117 no longer at interface
A:856 [ASN] T:4111 [A] A:120 [TYR] B:599 [G] ❌ 5F8H_A:120 no longer at interface
A:847 [ARG] T:4113 [G] A:101 [CYS] B:601 [U] ❌ 5F8H_A:101 no longer at interface
A:847 [ARG] T:4114 [A] A:101 [CYS] B:602 [C] ❌ 5F8H_A:101 no longer at interface
A:858 [ARG] T:4111 [A] A:122 [ALA] B:599 [G] ❌ 5F8H_A:122 no longer at interface
A:858 [ARG] T:4112 [C] A:122 [ALA] B:600 [G] ❌ 5F8H_A:122 no longer at interface
A:858 [ARG] T:4113 [G] A:122 [ALA] B:601 [U] ❌ 5F8H_A:122 no longer at interface
A:859 [SER] T:4111 [A] A:124 [GLY] B:599 [G] ❌ 5F8H_A:124 no longer at interface
A:1024 [GLU] T:4114 [A] A:296 [ILE] B:602 [C] ❌ 5F8H_A:296 no longer at interface
A:866 [LYS] T:4113 [G] A:130 [ILE] B:601 [U] ❌ 5F8H_A:130 no longer at interface
A:944 [ASP] T:4115 [U] A:209 [ALA] B:603 [U] ❌ 3AVX_A:944 no longer at interface
A:949 [THR] T:4116 [G] A:214 [PRO] B:604 [C] ❌ 3AVX_A:949 no longer at interface
A:1021 [TYR] T:4114 [A] A:293 [GLY] B:602 [C] ❌ 3AVX_A:1021 no longer at interface
A:1021 [TYR] T:4113 [G] A:293 [GLY] B:601 [U] ❌ 3AVX_A:1021 no longer at interface
A:1022 [THR] T:4113 [G] A:294 [THR] B:601 [U] ❌ 3AVX_A:1022 no longer at interface
A:1022 [THR] T:4112 [C] A:294 [THR] B:600 [G] ❌ 3AVX_A:1022 no longer at interface
A:1117 [ILE] T:4118 [A] A:413 [ASP] B:606 [C] ❌ 3AVX_A:1117 no longer at interface
A:1120 [LEU] T:4118 [A] A:416 [ARG] B:606 [C] ❌ 3AVX_A:1120 no longer at interface
A:1124 [TYR] T:4118 [A] A:420 [LEU] B:606 [C] ❌ 3AVX_A:1124 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Adenylyl and guanylyl cyclase catalytic domain-like & helical bundle domain in reverse transcriptase-like polymerases 0.61 2.25 0.06 0.61 0.24 0.56 0.47 0.63 0.50 0.18 0.59


Other pairs involving 3AVX_A_G,T or 5F8H_A_B,C

Total number of entries: 14

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
4K4Z_E_F,G 5F8H_A_B,C 0.95 0.99 0.39 0.82 Adenylyl and guanylyl cyclase catalytic domain-like & helical bundle domain in reverse transcriptase-like polymerases compare
4K4S_A_B,C 5F8H_A_B,C 0.92 0.99 0.44 0.85 Adenylyl and guanylyl cyclase catalytic domain-like & helical bundle domain in reverse transcriptase-like polymerases compare
5F8H_A_B,C 6LSG_A_B,C 0.86 0.99 0.6 0.91 Adenylyl and guanylyl cyclase catalytic domain-like & helical bundle domain in reverse transcriptase-like polymerases compare
5F8H_A_B,C 7AAP_A_T 0.70 0.8 1.58 0.09 Adenylyl and guanylyl cyclase catalytic domain-like compare
5F8H_A_B,C 5Y6Z_A_B,C 0.97 0.98 0.61 0.82 Adenylyl and guanylyl cyclase catalytic domain-like & helical bundle domain in reverse transcriptase-like polymerases compare
5F8H_A_B,C 6LSF_A_B,C 0.94 0.99 0.49 0.65 Adenylyl and guanylyl cyclase catalytic domain-like & helical bundle domain in reverse transcriptase-like polymerases compare
5F8H_A_B,C 7BV2_A_T 0.70 0.8 1.27 0.1 Adenylyl and guanylyl cyclase catalytic domain-like compare
5F8H_A_B,C 6KWQ_A_B,C 0.97 1.0 0.33 0.82 Adenylyl and guanylyl cyclase catalytic domain-like & helical bundle domain in reverse transcriptase-like polymerases compare
3OL9_A_B,C 5F8H_A_B,C 0.94 0.99 0.48 0.82 Adenylyl and guanylyl cyclase catalytic domain-like & helical bundle domain in reverse transcriptase-like polymerases compare
3AVX_A_G,T 5F8H_A_B,C 0.63 0.61 2.25 0.06 Adenylyl and guanylyl cyclase catalytic domain-like & helical bundle domain in reverse transcriptase-like polymerases compare
3AVX_A_G,T 6LSF_A_B,C 0.58 0.61 2.84 0.1 Adenylyl and guanylyl cyclase catalytic domain-like & helical bundle domain in reverse transcriptase-like polymerases compare
3AVX_A_G,T 3OL9_A_B,C 0.59 0.6 2.61 0.09 Adenylyl and guanylyl cyclase catalytic domain-like & helical bundle domain in reverse transcriptase-like polymerases compare
3AVX_A_G,T 5Y6Z_A_B,C 0.52 0.61 2.95 0.1 Adenylyl and guanylyl cyclase catalytic domain-like & helical bundle domain in reverse transcriptase-like polymerases compare
3AVX_A_G,T 4K4Z_E_F,G 0.61 0.61 2.51 0.09 Adenylyl and guanylyl cyclase catalytic domain-like & helical bundle domain in reverse transcriptase-like polymerases compare