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All interfaces > All interologs > Interface groups > group130 > 3OL9_A_B,C

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Licorice
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Licorice
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Chain
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Hydrophobicity
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Conservation*

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Rim - Core

Contacts -

3OL9_A
3OL9_B,C
Distance
Base Pair
Hbond nuc:res
Base Stacking
Residue conservation
A:18 [ASN] B:598 [A] 4.16 76.18
A:19 [ALA] B:598 [A] 4.0 75.33
A:20 [PRO] B:598 [A] 3.17 69.02
A:20 [PRO] B:599 [G] 3.85 69.02
A:22 [LYS] B:598 [A] 3.72 76.01
A:22 [LYS] B:599 [G] 3.46 base:BB 76.01
A:23 [THR] B:599 [G] 4.9 91.46
A:24 [LYS] B:598 [A] 4.46 64.26
A:24 [LYS] B:599 [G] 3.0 base:SC 64.26
A:43 [LEU] B:599 [G] 3.73 95.8
A:106 [GLY] B:603 [U] 4.52 C:699 [A] 50.98
A:107 [LEU] B:603 [U] 4.39 C:699 [A] 83.34
A:108 [GLU] B:603 [U] 3.3 C:699 [A] 80.46
A:108 [GLU] B:604 [C] 4.05 C:698 [G] 80.46
A:109 [ALA] B:602 [C] 4.96 C:700 [G] 69.67
A:110 [LEU] B:601 [U] 4.9 C:701 [A] 80.27
A:110 [LEU] B:602 [C] 4.47 C:700 [G] 80.27
A:111 [ASP] B:601 [U] 4.15 C:701 [A] 93.2
A:111 [ASP] B:602 [C] 4.75 C:700 [G] 93.2
A:112 [LEU] C:695 [C] 4.14 B:607 [G] 81.97
A:113 [SER] B:600 [G] 4.81 C:702 [O2C] 61.51
A:113 [SER] C:696 [G] 3.95 B:606 [C] 61.51
A:114 [THR] B:600 [G] 3.31 C:702 [O2C] 94.43
A:114 [THR] B:601 [U] 2.62 C:701 [A] 94.43
A:115 [SER] B:599 [G] 3.02 96.45
A:115 [SER] B:600 [G] 2.71 C:702 [O2C] 96.45
A:115 [SER] B:601 [U] 4.6 C:701 [A] 96.45
A:121 [VAL] B:599 [G] 3.68 63.94
A:126 [LYS] B:597 [C] 4.65 D:804 [G] 77.63
A:127 [LYS] B:600 [G] 4.39 C:702 [O2C] 97.21
A:127 [LYS] B:601 [U] 2.9 C:701 [A] 97.21
A:128 [ARG] C:695 [C] 3.77 B:607 [G] 63.34
A:128 [ARG] C:696 [G] 3.72 B:606 [C] 63.34
A:133 [LYS] C:694 [A] 3.81 B:608 [U] 5.47
A:133 [LYS] C:695 [C] 2.88 B:607 [G] 5.47
A:157 [TYR] B:599 [G] 3.42 80.36
A:159 [LYS] B:600 [G] 3.13 C:702 [O2C] base:SC 98.95
A:160 [ASP] B:599 [G] 3.73 98.87
A:176 [ILE] B:599 [G] 3.64 92.47
A:176 [ILE] B:600 [G] 3.11 C:702 [O2C] 92.47
A:177 [GLU] B:600 [G] 3.69 C:702 [O2C] sugar:BB 90.37
A:178 [ALA] B:600 [G] 3.23 C:702 [O2C] 84.07
A:179 [SER] B:600 [G] 3.19 C:702 [O2C] sugar:BB 83.89
A:179 [SER] B:601 [U] 4.62 C:701 [A] 83.89
A:184 [SER] B:601 [U] 4.29 C:701 [A] 84.73
A:188 [ARG] B:602 [C] 2.8 C:700 [G] 96.05
A:199 [HIS] B:602 [C] 3.72 C:700 [G] 80.25
A:199 [HIS] B:603 [U] 3.5 C:699 [A] 80.25
A:209 [ALA] B:603 [U] 4.87 C:699 [A] 96.81
A:210 [VAL] B:602 [C] 3.82 C:700 [G] 93.1
A:210 [VAL] B:603 [U] 3.77 C:699 [A] 93.1
A:211 [GLY] B:603 [U] 2.95 C:699 [A] sugar:BB 97.81
A:211 [GLY] B:604 [C] 3.47 C:698 [G] 97.81
A:212 [CYS] B:603 [U] 3.75 C:699 [A] sugar:BB 82.55
A:212 [CYS] B:604 [C] 3.21 C:698 [G] 82.55
A:213 [ASP] B:604 [C] 3.1 C:698 [G] 81.53
A:213 [ASP] B:605 [U] 3.63 C:697 [A] 81.53
A:214 [PRO] B:604 [C] 4.19 C:698 [G] 95.19
A:288 [SER] B:600 [G] 2.97 C:702 [O2C] base:BB 99.0
A:288 [SER] B:601 [U] 4.05 C:701 [A] 99.0
A:289 [GLY] B:600 [G] 2.53 C:702 [O2C] sugar:BB 98.85
A:289 [GLY] B:601 [U] 3.15 C:701 [A] 98.85
A:290 [CYS] B:600 [G] 4.69 C:702 [O2C] 76.33
A:290 [CYS] B:601 [U] 2.98 C:701 [A] sugar:BB 76.33
A:291 [SER] B:601 [U] 3.32 C:701 [A] 87.68
A:291 [SER] B:602 [C] 4.1 C:700 [G] 87.68
A:292 [GLY] B:601 [U] 3.53 C:701 [A] 80.11
A:293 [THR] B:601 [U] 4.05 C:701 [A] 99.0
A:294 [SER] B:601 [U] 5.0 C:701 [A] 95.34
A:294 [SER] B:602 [C] 4.37 C:700 [G] 95.34
A:294 [SER] C:701 [A] 4.57 B:601 [U] 95.34
A:326 [TYR] B:602 [C] 4.01 C:700 [G] 98.34
A:326 [TYR] B:603 [U] 3.32 C:699 [A] 98.34
A:326 [TYR] C:700 [G] 3.04 B:602 [C] base:SC 98.34
A:326 [TYR] C:701 [A] 2.87 B:601 [U] sugar:BB 98.34
A:327 [GLY] C:701 [A] 3.56 B:601 [U] 98.82
A:328 [ASP] C:701 [A] 3.08 B:601 [U] sugar:BB 98.97
A:329 [ASP] C:701 [A] 3.8 B:601 [U] 98.97
A:374 [LEU] C:700 [G] 3.34 B:602 [C] 98.47
A:374 [LEU] C:701 [A] 4.11 B:601 [U] 98.47
A:375 [LYS] C:700 [G] 3.15 B:602 [C] 98.32
A:375 [LYS] C:701 [A] 3.16 B:601 [U] 98.32
A:376 [ARG] C:699 [A] 4.15 B:603 [U] 98.85
A:376 [ARG] C:700 [G] 3.67 B:602 [C] sugar:SC 98.85
A:392 [MET] C:699 [A] 3.53 B:603 [U] 84.53
A:392 [MET] C:700 [G] 3.89 B:602 [C] 84.53
A:396 [GLU] C:700 [G] 4.32 B:602 [C] 77.87
A:400 [SER] C:698 [G] 3.6 B:604 [C] 86.17
A:400 [SER] C:699 [A] 2.73 B:603 [U] 86.17
A:405 [LYS] C:698 [G] 4.35 B:604 [C] 89.29
A:409 [ASN] C:696 [G] 3.92 B:606 [C] sugar:SC 62.67
A:409 [ASN] C:697 [A] 3.27 B:605 [U] 62.67
A:412 [ASP] B:607 [G] 3.46 C:695 [C] sugar:SC 72.58
A:412 [ASP] C:696 [G] 3.4 B:606 [C] base:SC 72.58
A:412 [ASP] C:697 [A] 3.81 B:605 [U] 72.58
A:412 [ASP] C:698 [G] 4.88 B:604 [C] 72.58
A:413 [HIS] C:697 [A] 3.7 B:605 [U] 81.04
A:413 [HIS] C:698 [G] 3.47 B:604 [C] 81.04
A:413 [HIS] C:699 [A] 4.26 B:603 [U] 81.04
A:415 [ARG] B:606 [C] 3.85 C:696 [G] 33.96
A:415 [ARG] B:607 [G] 3.78 C:695 [C] 33.96
A:416 [SER] B:606 [C] 4.23 C:696 [G] 93.98
A:416 [SER] C:697 [A] 4.37 B:605 [U] 93.98
A:416 [SER] C:698 [G] 3.78 B:604 [C] 93.98
A:417 [LEU] C:698 [G] 3.78 B:604 [C] 84.91
A:417 [LEU] C:699 [A] 4.2 B:603 [U] 84.91
A:419 [LEU] B:605 [U] 3.31 C:697 [A] 3.73
A:419 [LEU] B:606 [C] 3.24 C:696 [G] 3.73
A:420 [LEU] C:698 [G] 4.75 B:604 [C] 93.05
A:420 [LEU] C:699 [A] 3.58 B:603 [U] 93.05
A:456 [ARG] B:606 [C] 3.66 C:696 [G] 36.28
A:456 [ARG] B:607 [G] 4.31 C:695 [C] 36.28

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*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)

Properties of this interface

Interolog group ID Structure ID Structure description
 UniProt ID
 		ECOD label(s)
 		RFAM label(s)
 		Is ribosome? RCSB PDB link
group130 3OL9_A_B,C A: Polymerase, Human poliovirus 1 (genetically engineered) B: N/A C: N/A B3VQP5 Adenylyl and guanylyl cyclase catalytic domain-like & helical bundle domain in reverse transcriptase-like polymerases ✘

Interologs

Total number of interologs for this interface: 10

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
3OL9_A_B,C 6LSF_A_B,C 0.90 0.98 0.62 0.44 Adenylyl and guanylyl cyclase catalytic domain-like & helical bundle domain in reverse transcriptase-like polymerases compare
3OL9_A_B,C 7BV2_A_T 0.62 0.79 1.49 0.0 Adenylyl and guanylyl cyclase catalytic domain-like compare
3OL9_A_B,C 5Y6Z_A_B,C 0.91 0.98 0.68 0.87 Adenylyl and guanylyl cyclase catalytic domain-like & helical bundle domain in reverse transcriptase-like polymerases compare
3OL9_A_B,C 4K4Z_E_F,G 0.95 0.99 0.51 0.92 Adenylyl and guanylyl cyclase catalytic domain-like & helical bundle domain in reverse transcriptase-like polymerases compare
3OL9_A_B,C 6LSG_A_B,C 0.84 0.98 0.78 0.8 Adenylyl and guanylyl cyclase catalytic domain-like & helical bundle domain in reverse transcriptase-like polymerases compare
3OL9_A_B,C 7AAP_A_T 0.68 0.79 1.81 0.0 Adenylyl and guanylyl cyclase catalytic domain-like compare
3OL9_A_B,C 6KWQ_A_B,C 0.92 0.98 0.63 0.82 Adenylyl and guanylyl cyclase catalytic domain-like & helical bundle domain in reverse transcriptase-like polymerases compare
3OL9_A_B,C 5F8H_A_B,C 0.94 0.99 0.48 0.82 Adenylyl and guanylyl cyclase catalytic domain-like & helical bundle domain in reverse transcriptase-like polymerases compare
3OL9_A_B,C 4K4S_A_B,C 0.96 0.99 0.44 0.95 Adenylyl and guanylyl cyclase catalytic domain-like & helical bundle domain in reverse transcriptase-like polymerases compare
3AVX_A_G,T 3OL9_A_B,C 0.59 0.6 2.61 0.09 Adenylyl and guanylyl cyclase catalytic domain-like & helical bundle domain in reverse transcriptase-like polymerases compare