RNAprotDB

All interfaces > All interologs > Interface groups > group130 > 4K4S_A_B,C vs 7BV2_A_T

Interface analysis


mouse controls

Style

Protein

Cartoon
Licorice
Surface

RNA

Cartoon
Licorice
Surface

Color

Structure
Structure (with hetatm)
Chain
Chainbow

View

Focus on

Interface
RNA
Protein
All

Show chains

Interface

show interface as licorice

Common contacts -

4K4S_A
4K4S_B,C
7BV2_A
7BV2_T
Conserved?
A:210 [VAL] B:602 [C] A:589 [ILE] T:12 [U] ✔
A:210 [VAL] B:603 [U] A:589 [ILE] T:13 [A] ✔
A:214 [PRO] B:604 [C] A:593 [LYS] T:14 [A] ✔
A:289 [GLY] B:600 [G] A:683 [GLY] T:10 [U] ✔
A:289 [GLY] B:601 [U] A:683 [GLY] T:11 [A] ✔
A:177 [GLU] B:600 [G] A:558 [ALA] T:10 [U] ✔
A:178 [ALA] B:600 [G] A:559 [GLY] T:10 [U] ✔
A:115 [SER] B:599 [G] A:501 [SER] T:9 [U] ✔
A:115 [SER] B:600 [G] A:501 [SER] T:10 [U] ✔
A:115 [SER] B:601 [U] A:501 [SER] T:11 [A] ✔
A:126 [LYS] B:599 [G] A:511 [LYS] T:9 [U] ✔
A:157 [TYR] B:599 [G] A:543 [ASN] T:9 [U] ✔
A:211 [GLY] B:603 [U] A:590 [GLY] T:13 [A] ✔
A:211 [GLY] B:604 [C] A:590 [GLY] T:14 [A] ✔
A:121 [VAL] B:599 [G] A:507 [ASN] T:9 [U] ✔
A:199 [HIS] B:603 [U] A:580 [ALA] T:13 [A] ✔
A:412 [ASP] B:607 [G] A:857 [GLU] T:17 [U] ✔
A:213 [ASP] B:604 [C] A:592 [SER] T:14 [A] ✔
A:213 [ASP] B:605 [U] A:592 [SER] T:15 [C] ✔
A:184 [SER] B:601 [U] A:565 [THR] T:11 [A] ✔
A:456 [ARG] B:606 [C] A:924 [MET] T:16 [U] ✔
A:419 [LEU] B:605 [U] A:864 [ILE] T:15 [C] ✔
A:419 [LEU] B:606 [C] A:864 [ILE] T:16 [U] ✔
A:212 [CYS] B:603 [U] A:591 [THR] T:13 [A] ✔
A:212 [CYS] B:604 [C] A:591 [THR] T:14 [A] ✔
A:188 [ARG] B:602 [C] A:569 [ARG] T:12 [U] ✔
A:416 [SER] B:606 [C] A:861 [SER] T:16 [U] ✔
A:288 [SER] B:600 [G] A:682 [SER] T:10 [U] ✔
A:288 [SER] B:601 [U] A:682 [SER] T:11 [A] ✔
A:291 [SER] B:601 [U] A:685 [ALA] T:11 [A] ✔
A:291 [SER] B:602 [C] A:685 [ALA] T:12 [U] ✔
A:176 [ILE] B:599 [G] A:557 [VAL] T:9 [U] ✔
A:176 [ILE] B:600 [G] A:557 [VAL] T:10 [U] ✔
A:111 [ASP] B:601 [U] A:497 [ASN] T:11 [A] ✔
A:114 [THR] B:600 [G] A:500 [LYS] T:10 [U] ✔
A:114 [THR] B:601 [U] A:500 [LYS] T:11 [A] ✔
A:415 [ARG] B:606 [C] A:860 [VAL] T:16 [U] ✔
A:290 [CYS] B:601 [U] A:684 [ASP] T:11 [A] ✔
A:292 [GLY] B:601 [U] A:686 [THR] T:11 [A] ✔
A:110 [LEU] B:602 [C] A:496 [ASN] T:12 [U] ✔
A:179 [SER] B:600 [G] A:560 [VAL] T:10 [U] ✔
A:159 [LYS] B:600 [G] A:545 [LYS] T:10 [U] ✔
A:126 [LYS] B:598 [A] A:511 [LYS] T:8 [U] ❌ 7BV2_A_T
A:199 [HIS] B:602 [C] A:580 [ALA] T:12 [U] ❌ 7BV2_A_T
A:184 [SER] B:602 [C] A:565 [THR] T:12 [U] ❌ 7BV2_A_T
A:456 [ARG] B:607 [G] A:924 [MET] T:17 [U] ❌ 7BV2_A_T
A:416 [SER] B:605 [U] A:861 [SER] T:15 [C] ❌ 7BV2_A_T
A:114 [THR] B:599 [G] A:500 [LYS] T:9 [U] ❌ 7BV2_A_T
A:415 [ARG] B:607 [G] A:860 [VAL] T:17 [U] ❌ 7BV2_A_T
A:290 [CYS] B:600 [G] A:684 [ASP] T:10 [U] ❌ 7BV2_A_T
A:179 [SER] B:601 [U] A:560 [VAL] T:11 [A] ❌ 7BV2_A_T
A:110 [LEU] B:603 [U] A:496 [ASN] T:13 [A] ❌ 4K4S_A_B,C
A:115 [SER] B:598 [A] A:501 [SER] T:8 [U] ❌ 4K4S_A_B,C
A:121 [VAL] B:598 [A] A:507 [ASN] T:8 [U] ❌ 4K4S_A_B,C
A:157 [TYR] B:598 [A] A:543 [ASN] T:8 [U] ❌ 4K4S_A_B,C
A:159 [LYS] B:599 [G] A:545 [LYS] T:9 [U] ❌ 4K4S_A_B,C
A:188 [ARG] B:601 [U] A:569 [ARG] T:11 [A] ❌ 4K4S_A_B,C
A:199 [HIS] B:604 [C] A:580 [ALA] T:14 [A] ❌ 4K4S_A_B,C
A:456 [ARG] B:605 [U] A:924 [MET] T:15 [C] ❌ 4K4S_A_B,C
A:109 [ALA] B:602 [C] A:495 [VAL] T:12 [U] ❌ 7BV2_A:495 no longer at interface
A:24 [LYS] B:598 [A] A:412 [PRO] T:8 [U] ❌ 7BV2_A:412 no longer at interface
A:24 [LYS] B:599 [G] A:412 [PRO] T:9 [U] ❌ 7BV2_A:412 no longer at interface
A:20 [PRO] B:598 [A] A:408 [GLN] T:8 [U] ❌ 7BV2_A:408 no longer at interface
A:20 [PRO] B:599 [G] A:408 [GLN] T:9 [U] ❌ 7BV2_A:408 no longer at interface
A:19 [ALA] B:598 [A] A:407 [PHE] T:8 [U] ❌ 7BV2_A:407 no longer at interface
A:209 [ALA] B:603 [U] A:588 [VAL] T:13 [A] ❌ 7BV2_A:588 no longer at interface
A:160 [ASP] B:599 [G] A:546 [TYR] T:9 [U] ❌ 7BV2_A:546 no longer at interface
A:22 [LYS] B:598 [A] A:410 [VAL] T:8 [U] ❌ 7BV2_A:410 no longer at interface
A:22 [LYS] B:599 [G] A:410 [VAL] T:9 [U] ❌ 7BV2_A:410 no longer at interface
A:195 [TYR] B:602 [C] A:576 [LEU] T:12 [U] ❌ 7BV2_A:576 no longer at interface
A:23 [THR] B:599 [G] A:411 [LYS] T:9 [U] ❌ 7BV2_A:411 no longer at interface
A:294 [SER] B:602 [C] A:688 [ALA] T:12 [U] ❌ 7BV2_A:688 no longer at interface
A:127 [LYS] B:600 [G] A:512 [ALA] T:10 [U] ❌ 7BV2_A:512 no longer at interface
A:127 [LYS] B:601 [U] A:512 [ALA] T:11 [A] ❌ 7BV2_A:512 no longer at interface
A:293 [THR] B:600 [G] A:687 [THR] T:10 [U] ❌ 7BV2_A:687 no longer at interface
A:293 [THR] B:601 [U] A:687 [THR] T:11 [A] ❌ 7BV2_A:687 no longer at interface
A:18 [ASN] B:598 [A] A:406 [ALA] T:8 [U] ❌ 7BV2_A:406 no longer at interface
A:326 [TYR] B:602 [C] A:758 [LEU] T:12 [U] ❌ 7BV2_A:758 no longer at interface
A:326 [TYR] B:603 [U] A:758 [LEU] T:13 [A] ❌ 7BV2_A:758 no longer at interface
A:113 [SER] B:600 [G] A:499 [ASP] T:10 [U] ❌ 7BV2_A:499 no longer at interface
A:43 [LEU] B:599 [G] A:444 [GLN] T:9 [U] ❌ 7BV2_A:444 no longer at interface
A:155 [VAL] B:599 [G] A:541 [GLN] T:9 [U] ❌ 4K4S_A:155 no longer at interface
A:155 [VAL] B:598 [A] A:541 [GLN] T:8 [U] ❌ 4K4S_A:155 no longer at interface
A:158 [VAL] B:599 [G] A:544 [LEU] T:9 [U] ❌ 4K4S_A:158 no longer at interface
A:196 [ALA] B:603 [U] A:577 [LYS] T:13 [A] ❌ 4K4S_A:196 no longer at interface
A:202 [PRO] B:604 [C] A:583 [ARG] T:14 [A] ❌ 4K4S_A:202 no longer at interface
A:215 [ASP] B:604 [C] A:594 [PHE] T:14 [A] ❌ 4K4S_A:215 no longer at interface
A:215 [ASP] B:605 [U] A:594 [PHE] T:15 [C] ❌ 4K4S_A:215 no longer at interface
A:295 [ILE] B:602 [C] A:689 [TYR] T:12 [U] ❌ 4K4S_A:295 no longer at interface
A:295 [ILE] B:603 [U] A:689 [TYR] T:13 [A] ❌ 4K4S_A:295 no longer at interface
A:447 [LEU] B:607 [G] A:915 [TYR] T:17 [U] ❌ 4K4S_A:447 no longer at interface
A:452 [THR] B:607 [G] A:920 [PHE] T:17 [U] ❌ 4K4S_A:452 no longer at interface
A:452 [THR] B:606 [C] A:920 [PHE] T:16 [U] ❌ 4K4S_A:452 no longer at interface

logo_download Export the table of contacts

Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Adenylyl and guanylyl cyclase catalytic domain-like 0.79 1.56 0.00 0.81 0.41 0.75 1.0 0.60 0.56 0.24 0.67


Other pairs involving 4K4S_A_B,C or 7BV2_A_T

Total number of entries: 17

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
4K4Z_E_F,G 7BV2_A_T 0.60 0.79 1.53 0.0 Adenylyl and guanylyl cyclase catalytic domain-like compare
5Y6Z_A_B,C 7BV2_A_T 0.59 0.8 1.4 0.0 Adenylyl and guanylyl cyclase catalytic domain-like compare
4K4S_A_B,C 7AAP_A_T 0.66 0.79 1.85 0.0 Adenylyl and guanylyl cyclase catalytic domain-like compare
4K4S_A_B,C 5F8H_A_B,C 0.92 0.99 0.44 0.85 Adenylyl and guanylyl cyclase catalytic domain-like & helical bundle domain in reverse transcriptase-like polymerases compare
4K4S_A_B,C 5Y6Z_A_B,C 0.88 0.98 0.8 0.87 Adenylyl and guanylyl cyclase catalytic domain-like & helical bundle domain in reverse transcriptase-like polymerases compare
4K4S_A_B,C 4K4Z_E_F,G 0.95 0.99 0.41 0.91 Adenylyl and guanylyl cyclase catalytic domain-like & helical bundle domain in reverse transcriptase-like polymerases compare
4K4S_A_B,C 6LSG_A_B,C 0.80 0.99 0.75 0.82 Adenylyl and guanylyl cyclase catalytic domain-like & helical bundle domain in reverse transcriptase-like polymerases compare
4K4S_A_B,C 6LSF_A_B,C 0.87 0.98 0.74 0.5 Adenylyl and guanylyl cyclase catalytic domain-like & helical bundle domain in reverse transcriptase-like polymerases compare
4K4S_A_B,C 6KWQ_A_B,C 0.92 0.98 0.61 0.79 Adenylyl and guanylyl cyclase catalytic domain-like & helical bundle domain in reverse transcriptase-like polymerases compare
4K4S_A_B,C 7BV2_A_T 0.60 0.79 1.56 0.0 Adenylyl and guanylyl cyclase catalytic domain-like compare
5F8H_A_B,C 7BV2_A_T 0.70 0.8 1.27 0.1 Adenylyl and guanylyl cyclase catalytic domain-like compare
3OL9_A_B,C 7BV2_A_T 0.62 0.79 1.49 0.0 Adenylyl and guanylyl cyclase catalytic domain-like compare
3OL9_A_B,C 4K4S_A_B,C 0.96 0.99 0.44 0.95 Adenylyl and guanylyl cyclase catalytic domain-like & helical bundle domain in reverse transcriptase-like polymerases compare
7AAP_A_T 7BV2_A_T 0.96 0.99 0.42 0.9 Adenylyl and guanylyl cyclase catalytic domain-like compare
6KWQ_A_B,C 7BV2_A_T 0.63 0.78 1.32 0.0 Adenylyl and guanylyl cyclase catalytic domain-like compare
6LSF_A_B,C 7BV2_A_T 0.69 0.8 1.31 0.1 Adenylyl and guanylyl cyclase catalytic domain-like compare
6LSG_A_B,C 7BV2_A_T 0.59 0.8 1.18 0.12 Adenylyl and guanylyl cyclase catalytic domain-like compare