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All interfaces > All interologs > Interface groups > group130 > 4K4Z_E_F,G vs 5Y6Z_A_B,C

Interface analysis


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Common contacts -

4K4Z_E
4K4Z_F,G
5Y6Z_A
5Y6Z_B,C
Conserved?
E:177 [GLU] F:600 [G] A:177 [GLU] B:600 [G] ✔
E:210 [VAL] F:602 [C] A:210 [VAL] B:602 [C] ✔
E:210 [VAL] F:603 [U] A:210 [VAL] B:603 [U] ✔
E:293 [GLY] F:601 [U] A:293 [GLY] B:601 [U] ✔
E:214 [PRO] F:604 [C] A:214 [PRO] B:604 [C] ✔
E:292 [SER] F:601 [U] A:292 [SER] B:601 [U] ✔
E:292 [SER] F:602 [C] A:292 [SER] B:602 [C] ✔
E:414 [HIS] G:1309 [A] A:414 [HIS] C:1308 [A] ✔
E:414 [HIS] G:1310 [G] A:414 [HIS] C:1309 [G] ✔
E:414 [HIS] G:1311 [A] A:414 [HIS] C:1310 [A] ✔
E:413 [ASP] F:607 [G] A:413 [ASP] B:607 [G] ✔
E:413 [ASP] G:1308 [G] A:413 [ASP] C:1307 [G] ✔
E:413 [ASP] G:1309 [A] A:413 [ASP] C:1308 [A] ✔
E:413 [ASP] G:1310 [G] A:413 [ASP] C:1309 [G] ✔
E:24 [LYS] F:599 [G] A:24 [LYS] B:599 [G] ✔
E:417 [SER] F:605 [U] A:417 [SER] B:605 [U] ✔
E:417 [SER] F:606 [C] A:417 [SER] B:606 [C] ✔
E:417 [SER] G:1309 [A] A:417 [SER] C:1308 [A] ✔
E:417 [SER] G:1310 [G] A:417 [SER] C:1309 [G] ✔
E:108 [GLU] F:603 [U] A:108 [GLU] B:603 [U] ✔
E:20 [PRO] F:598 [A] A:20 [PRO] B:598 [A] ✔
E:20 [PRO] F:599 [G] A:20 [PRO] B:599 [G] ✔
E:178 [ALA] F:600 [G] A:178 [ALA] B:600 [G] ✔
E:329 [ASP] G:1313 [A] A:329 [ASP] C:1312 [A] ✔
E:327 [TYR] F:602 [C] A:327 [TYR] B:602 [C] ✔
E:327 [TYR] F:603 [U] A:327 [TYR] B:603 [U] ✔
E:327 [TYR] G:1312 [G] A:327 [TYR] C:1311 [G] ✔
E:327 [TYR] G:1313 [A] A:327 [TYR] C:1312 [A] ✔
E:115 [SER] F:599 [G] A:115 [SER] B:599 [G] ✔
E:115 [SER] F:600 [G] A:115 [SER] B:600 [G] ✔
E:115 [SER] F:601 [U] A:115 [SER] B:601 [U] ✔
E:289 [SER] F:600 [G] A:289 [SER] B:600 [G] ✔
E:209 [ALA] F:603 [U] A:209 [ALA] B:603 [U] ✔
E:126 [LYS] F:597 [C] A:126 [LYS] B:597 [C] ✔
E:157 [TYR] F:598 [A] A:157 [TYR] B:598 [A] ✔
E:157 [TYR] F:599 [G] A:157 [TYR] B:599 [G] ✔
E:160 [ASP] F:599 [G] A:160 [ASP] B:599 [G] ✔
E:113 [THR] F:600 [G] A:113 [HIS] B:600 [G] ✔
E:113 [THR] G:1308 [G] A:113 [HIS] C:1307 [G] ✔
E:211 [GLY] F:603 [U] A:211 [GLY] B:603 [U] ✔
E:211 [GLY] F:604 [C] A:211 [GLY] B:604 [C] ✔
E:401 [SER] G:1310 [G] A:401 [SER] C:1309 [G] ✔
E:401 [SER] G:1311 [A] A:401 [SER] C:1310 [A] ✔
E:330 [ASP] G:1313 [A] A:330 [ASP] C:1312 [A] ✔
E:121 [VAL] F:599 [G] A:121 [SER] B:599 [G] ✔
E:22 [LYS] F:599 [G] A:22 [ARG] B:599 [G] ✔
E:199 [HIS] F:602 [C] A:199 [HIS] B:602 [C] ✔
E:199 [HIS] F:603 [U] A:199 [HIS] B:603 [U] ✔
E:375 [LEU] G:1312 [G] A:375 [LEU] C:1311 [G] ✔
E:375 [LEU] G:1313 [A] A:375 [LEU] C:1312 [A] ✔
E:328 [GLY] G:1313 [A] A:328 [GLY] C:1312 [A] ✔
E:158 [VAL] F:599 [G] A:158 [VAL] B:599 [G] ✔
E:290 [GLY] F:600 [G] A:290 [GLY] B:600 [G] ✔
E:290 [GLY] F:601 [U] A:290 [GLY] B:601 [U] ✔
E:295 [SER] F:601 [U] A:295 [SER] B:601 [U] ✔
E:295 [SER] F:602 [C] A:295 [SER] B:602 [C] ✔
E:295 [SER] G:1313 [A] A:295 [SER] C:1312 [A] ✔
E:213 [ASP] F:604 [C] A:213 [ASN] B:604 [C] ✔
E:213 [ASP] F:605 [U] A:213 [ASN] B:605 [U] ✔
E:184 [SER] F:601 [U] A:184 [SER] B:601 [U] ✔
E:23 [THR] F:599 [G] A:23 [THR] B:599 [G] ✔
E:397 [ASP] G:1312 [G] A:397 [GLU] C:1311 [G] ✔
E:377 [ARG] G:1311 [A] A:377 [ARG] C:1310 [A] ✔
E:377 [ARG] G:1312 [G] A:377 [ARG] C:1311 [G] ✔
E:212 [CYS] F:603 [U] A:212 [CYS] B:603 [U] ✔
E:212 [CYS] F:604 [C] A:212 [CYS] B:604 [C] ✔
E:188 [ARG] F:602 [C] A:188 [ARG] B:602 [C] ✔
E:410 [ASN] G:1308 [G] A:410 [ASN] C:1307 [G] ✔
E:410 [ASN] G:1309 [A] A:410 [ASN] C:1308 [A] ✔
E:106 [GLY] F:603 [U] A:106 [TYR] B:603 [U] ✔
E:176 [ILE] F:599 [G] A:176 [ILE] B:599 [G] ✔
E:176 [ILE] F:600 [G] A:176 [ILE] B:600 [G] ✔
E:111 [ASP] F:601 [U] A:111 [ASP] B:601 [U] ✔
E:420 [LEU] F:605 [U] A:420 [LEU] B:605 [U] ✔
E:420 [LEU] F:606 [C] A:420 [LEU] B:606 [C] ✔
E:376 [LYS] G:1312 [G] A:376 [LYS] C:1311 [G] ✔
E:376 [LYS] G:1313 [A] A:376 [LYS] C:1312 [A] ✔
E:114 [THR] F:600 [G] A:114 [THR] B:600 [G] ✔
E:114 [THR] F:601 [U] A:114 [THR] B:601 [U] ✔
E:127 [LYS] F:600 [G] A:127 [LYS] B:600 [G] ✔
E:127 [LYS] F:601 [U] A:127 [LYS] B:601 [U] ✔
E:418 [LEU] G:1310 [G] A:418 [LEU] C:1309 [G] ✔
E:418 [LEU] G:1311 [A] A:418 [LEU] C:1310 [A] ✔
E:18 [ASN] F:598 [A] A:18 [ASN] B:598 [A] ✔
E:416 [ARG] F:606 [C] A:416 [ARG] B:606 [C] ✔
E:416 [ARG] F:607 [G] A:416 [ARG] B:607 [G] ✔
E:294 [THR] F:600 [G] A:294 [THR] B:600 [G] ✔
E:294 [THR] F:601 [U] A:294 [THR] B:601 [U] ✔
E:421 [LEU] G:1310 [G] A:421 [LEU] C:1309 [G] ✔
E:421 [LEU] G:1311 [A] A:421 [LEU] C:1310 [A] ✔
E:406 [LYS] G:1310 [G] A:406 [LYS] C:1309 [G] ✔
E:291 [CYS] F:600 [G] A:291 [CYS] B:600 [G] ✔
E:291 [CYS] F:601 [U] A:291 [CYS] B:601 [U] ✔
E:393 [MET] G:1311 [A] A:393 [MET] C:1310 [A] ✔
E:393 [MET] G:1312 [G] A:393 [MET] C:1311 [G] ✔
E:179 [SER] F:600 [G] A:179 [SER] B:600 [G] ✔
E:179 [SER] F:601 [U] A:179 [SER] B:601 [U] ✔
E:43 [LEU] F:599 [G] A:43 [LEU] B:599 [G] ✔
E:159 [LYS] F:600 [G] A:159 [LYS] B:600 [G] ✔
E:293 [GLY] F:602 [C] A:293 [GLY] B:602 [C] ❌ 5Y6Z_A_B,C
E:24 [LYS] F:598 [A] A:24 [LYS] B:598 [A] ❌ 5Y6Z_A_B,C
E:108 [GLU] F:604 [C] A:108 [GLU] B:604 [C] ❌ 5Y6Z_A_B,C
E:121 [VAL] F:598 [A] A:121 [SER] B:598 [A] ❌ 5Y6Z_A_B,C
E:184 [SER] F:602 [C] A:184 [SER] B:602 [C] ❌ 5Y6Z_A_B,C
E:188 [ARG] F:601 [U] A:188 [ARG] B:601 [U] ❌ 5Y6Z_A_B,C
E:410 [ASN] G:1310 [G] A:410 [ASN] C:1309 [G] ❌ 5Y6Z_A_B,C
E:110 [LEU] F:602 [C] A:110 [ILE] B:602 [C] ❌ 5Y6Z_A_B,C
E:159 [LYS] G:1313 [A] A:159 [LYS] C:1312 [A] ❌ 5Y6Z_A_B,C
E:110 [LEU] F:601 [U] A:110 [ILE] B:601 [U] ❌ 4K4Z_E_F,G
E:111 [ASP] F:602 [C] A:111 [ASP] B:602 [C] ❌ 4K4Z_E_F,G
E:113 [THR] G:1307 [C] A:113 [HIS] C:1306 [C] ❌ 4K4Z_E_F,G
E:114 [THR] F:599 [G] A:114 [THR] B:599 [G] ❌ 4K4Z_E_F,G
E:126 [LYS] F:598 [A] A:126 [LYS] B:598 [A] ❌ 4K4Z_E_F,G
E:289 [SER] F:601 [U] A:289 [SER] B:601 [U] ❌ 4K4Z_E_F,G
E:413 [ASP] F:606 [C] A:413 [ASP] B:606 [C] ❌ 4K4Z_E_F,G
E:102 [TYR] G:1306 [A] A:102 [TYR] C:1305 [A] ❌ 5Y6Z_A:102, 5Y6Z_C:694 no longer at interface
E:128 [ARG] G:1306 [A] A:128 [ARG] C:1305 [A] ❌ 5Y6Z_A:128, 5Y6Z_C:694 no longer at interface
E:134 [LYS] G:1306 [A] A:134 [ILE] C:1305 [A] ❌ 5Y6Z_A:134, 5Y6Z_C:694 no longer at interface
E:133 [LYS] G:1306 [A] A:133 [PRO] C:1305 [A] ❌ 5Y6Z_A:133, 5Y6Z_C:694 no longer at interface
E:128 [ARG] G:1307 [C] A:128 [ARG] C:1306 [C] ❌ 5Y6Z_A:128 no longer at interface
E:128 [ARG] G:1308 [G] A:128 [ARG] C:1307 [G] ❌ 5Y6Z_A:128 no longer at interface
E:107 [LEU] F:602 [C] A:107 [LEU] B:602 [C] ❌ 5Y6Z_A:107 no longer at interface
E:107 [LEU] F:603 [U] A:107 [LEU] B:603 [U] ❌ 5Y6Z_A:107 no longer at interface
E:409 [LYS] G:1308 [G] A:409 [ARG] C:1307 [G] ❌ 5Y6Z_A:409 no longer at interface
E:409 [LYS] G:1309 [A] A:409 [ARG] C:1308 [A] ❌ 5Y6Z_A:409 no longer at interface
E:17 [ILE] F:598 [A] A:17 [ILE] B:598 [A] ❌ 5Y6Z_A:17 no longer at interface
E:457 [LYS] F:607 [G] A:457 [ASN] B:607 [G] ❌ 5Y6Z_A:457 no longer at interface
E:195 [TYR] F:602 [C] A:195 [TYR] B:602 [C] ❌ 5Y6Z_A:195 no longer at interface
E:112 [LEU] G:1307 [C] A:112 [LEU] C:1306 [C] ❌ 5Y6Z_A:112 no longer at interface
E:133 [LYS] G:1307 [C] A:133 [PRO] C:1306 [C] ❌ 5Y6Z_A:133 no longer at interface
E:19 [THR] F:598 [A] A:19 [GLY] B:598 [A] ❌ 4K4Z_E:19 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Adenylyl and guanylyl cyclase catalytic domain-like & helical bundle domain in reverse transcriptase-like polymerases 0.98 0.73 0.87 0.98 0.57 0.98 1.0 0.90 0.92 0.50 0.50


Other pairs involving 4K4Z_E_F,G or 5Y6Z_A_B,C

Total number of entries: 19

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
4K4Z_E_F,G 7AAP_A_T 0.61 0.79 1.77 0.0 Adenylyl and guanylyl cyclase catalytic domain-like compare
4K4Z_E_F,G 6LSG_A_B,C 0.80 0.99 0.69 0.8 Adenylyl and guanylyl cyclase catalytic domain-like & helical bundle domain in reverse transcriptase-like polymerases compare
4K4Z_E_F,G 7BV2_A_T 0.60 0.79 1.53 0.0 Adenylyl and guanylyl cyclase catalytic domain-like compare
4K4Z_E_F,G 5F8H_A_B,C 0.95 0.99 0.39 0.82 Adenylyl and guanylyl cyclase catalytic domain-like & helical bundle domain in reverse transcriptase-like polymerases compare
4K4Z_E_F,G 6KWQ_A_B,C 0.92 0.98 0.55 0.77 Adenylyl and guanylyl cyclase catalytic domain-like & helical bundle domain in reverse transcriptase-like polymerases compare
4K4Z_E_F,G 6LSF_A_B,C 0.87 0.99 0.7 0.44 Adenylyl and guanylyl cyclase catalytic domain-like & helical bundle domain in reverse transcriptase-like polymerases compare
4K4Z_E_F,G 5Y6Z_A_B,C 0.90 0.98 0.73 0.87 Adenylyl and guanylyl cyclase catalytic domain-like & helical bundle domain in reverse transcriptase-like polymerases compare
5Y6Z_A_B,C 6KWQ_A_B,C 0.94 0.99 0.55 0.93 Adenylyl and guanylyl cyclase catalytic domain-like & helical bundle domain in reverse transcriptase-like polymerases compare
5Y6Z_A_B,C 6LSF_A_B,C 0.93 0.98 0.51 0.44 Adenylyl and guanylyl cyclase catalytic domain-like & helical bundle domain in reverse transcriptase-like polymerases compare
5Y6Z_A_B,C 7BV2_A_T 0.59 0.8 1.4 0.0 Adenylyl and guanylyl cyclase catalytic domain-like compare
5Y6Z_A_B,C 7AAP_A_T 0.65 0.8 1.76 0.0 Adenylyl and guanylyl cyclase catalytic domain-like compare
5Y6Z_A_B,C 6LSG_A_B,C 0.87 0.97 0.85 0.8 Adenylyl and guanylyl cyclase catalytic domain-like & helical bundle domain in reverse transcriptase-like polymerases compare
4K4S_A_B,C 5Y6Z_A_B,C 0.88 0.98 0.8 0.87 Adenylyl and guanylyl cyclase catalytic domain-like & helical bundle domain in reverse transcriptase-like polymerases compare
4K4S_A_B,C 4K4Z_E_F,G 0.95 0.99 0.41 0.91 Adenylyl and guanylyl cyclase catalytic domain-like & helical bundle domain in reverse transcriptase-like polymerases compare
5F8H_A_B,C 5Y6Z_A_B,C 0.97 0.98 0.61 0.82 Adenylyl and guanylyl cyclase catalytic domain-like & helical bundle domain in reverse transcriptase-like polymerases compare
3OL9_A_B,C 5Y6Z_A_B,C 0.91 0.98 0.68 0.87 Adenylyl and guanylyl cyclase catalytic domain-like & helical bundle domain in reverse transcriptase-like polymerases compare
3OL9_A_B,C 4K4Z_E_F,G 0.95 0.99 0.51 0.92 Adenylyl and guanylyl cyclase catalytic domain-like & helical bundle domain in reverse transcriptase-like polymerases compare
3AVX_A_G,T 5Y6Z_A_B,C 0.52 0.61 2.95 0.1 Adenylyl and guanylyl cyclase catalytic domain-like & helical bundle domain in reverse transcriptase-like polymerases compare
3AVX_A_G,T 4K4Z_E_F,G 0.61 0.61 2.51 0.09 Adenylyl and guanylyl cyclase catalytic domain-like & helical bundle domain in reverse transcriptase-like polymerases compare