Interface analysis
Style
Protein
CartoonLicorice
Surface
RNA
CartoonLicorice
Surface
Color
StructureStructure (with hetatm)
Chain
Chainbow
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InterfaceRNA
Protein
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Show chains
Interface
show interface as licoriceCommon contacts -
4K4Z_E
|
4K4Z_F,G
|
7AAP_A
|
7AAP_T
|
Conserved?
|
---|---|---|---|---|
E:177 [GLU] | F:600 [G] | A:558 [ALA] | T:10 [C] | ✔ |
E:210 [VAL] | F:602 [C] | A:589 [ILE] | T:12 [U] | ✔ |
E:210 [VAL] | F:603 [U] | A:589 [ILE] | T:13 [A] | ✔ |
E:293 [GLY] | F:601 [U] | A:686 [THR] | T:11 [A] | ✔ |
E:214 [PRO] | F:604 [C] | A:593 [LYS] | T:14 [A] | ✔ |
E:292 [SER] | F:601 [U] | A:685 [ALA] | T:11 [A] | ✔ |
E:292 [SER] | F:602 [C] | A:685 [ALA] | T:12 [U] | ✔ |
E:413 [ASP] | F:607 [G] | A:857 [GLU] | T:17 [U] | ✔ |
E:417 [SER] | F:606 [C] | A:861 [SER] | T:16 [U] | ✔ |
E:20 [PRO] | F:598 [A] | A:408 [GLN] | T:8 [U] | ✔ |
E:178 [ALA] | F:600 [G] | A:559 [GLY] | T:10 [C] | ✔ |
E:115 [SER] | F:599 [G] | A:501 [SER] | T:9 [U] | ✔ |
E:115 [SER] | F:600 [G] | A:501 [SER] | T:10 [C] | ✔ |
E:115 [SER] | F:601 [U] | A:501 [SER] | T:11 [A] | ✔ |
E:289 [SER] | F:600 [G] | A:682 [SER] | T:10 [C] | ✔ |
E:157 [TYR] | F:598 [A] | A:543 [ASN] | T:8 [U] | ✔ |
E:157 [TYR] | F:599 [G] | A:543 [ASN] | T:9 [U] | ✔ |
E:211 [GLY] | F:603 [U] | A:590 [GLY] | T:13 [A] | ✔ |
E:211 [GLY] | F:604 [C] | A:590 [GLY] | T:14 [A] | ✔ |
E:121 [VAL] | F:598 [A] | A:507 [ASN] | T:8 [U] | ✔ |
E:121 [VAL] | F:599 [G] | A:507 [ASN] | T:9 [U] | ✔ |
E:199 [HIS] | F:603 [U] | A:580 [ALA] | T:13 [A] | ✔ |
E:158 [VAL] | F:599 [G] | A:544 [LEU] | T:9 [U] | ✔ |
E:290 [GLY] | F:600 [G] | A:683 [GLY] | T:10 [C] | ✔ |
E:290 [GLY] | F:601 [U] | A:683 [GLY] | T:11 [A] | ✔ |
E:295 [SER] | F:602 [C] | A:688 [ALA] | T:12 [U] | ✔ |
E:213 [ASP] | F:604 [C] | A:592 [SER] | T:14 [A] | ✔ |
E:213 [ASP] | F:605 [U] | A:592 [SER] | T:15 [C] | ✔ |
E:212 [CYS] | F:603 [U] | A:591 [THR] | T:13 [A] | ✔ |
E:212 [CYS] | F:604 [C] | A:591 [THR] | T:14 [A] | ✔ |
E:188 [ARG] | F:601 [U] | A:569 [ARG] | T:11 [A] | ✔ |
E:188 [ARG] | F:602 [C] | A:569 [ARG] | T:12 [U] | ✔ |
E:176 [ILE] | F:599 [G] | A:557 [VAL] | T:9 [U] | ✔ |
E:176 [ILE] | F:600 [G] | A:557 [VAL] | T:10 [C] | ✔ |
E:111 [ASP] | F:601 [U] | A:497 [ASN] | T:11 [A] | ✔ |
E:420 [LEU] | F:605 [U] | A:864 [ILE] | T:15 [C] | ✔ |
E:420 [LEU] | F:606 [C] | A:864 [ILE] | T:16 [U] | ✔ |
E:114 [THR] | F:600 [G] | A:500 [LYS] | T:10 [C] | ✔ |
E:114 [THR] | F:601 [U] | A:500 [LYS] | T:11 [A] | ✔ |
E:416 [ARG] | F:606 [C] | A:860 [VAL] | T:16 [U] | ✔ |
E:294 [THR] | F:601 [U] | A:687 [THR] | T:11 [A] | ✔ |
E:110 [LEU] | F:602 [C] | A:496 [ASN] | T:12 [U] | ✔ |
E:291 [CYS] | F:601 [U] | A:684 [ASP] | T:11 [A] | ✔ |
E:179 [SER] | F:600 [G] | A:560 [VAL] | T:10 [C] | ✔ |
E:159 [LYS] | F:600 [G] | A:545 [LYS] | T:10 [C] | ✔ |
E:293 [GLY] | F:602 [C] | A:686 [THR] | T:12 [U] | ❌ 7AAP_A_T |
E:417 [SER] | F:605 [U] | A:861 [SER] | T:15 [C] | ❌ 7AAP_A_T |
E:20 [PRO] | F:599 [G] | A:408 [GLN] | T:9 [U] | ❌ 7AAP_A_T |
E:199 [HIS] | F:602 [C] | A:580 [ALA] | T:12 [U] | ❌ 7AAP_A_T |
E:457 [LYS] | F:607 [G] | A:924 [MET] | T:17 [U] | ❌ 7AAP_A_T |
E:295 [SER] | F:601 [U] | A:688 [ALA] | T:11 [A] | ❌ 7AAP_A_T |
E:416 [ARG] | F:607 [G] | A:860 [VAL] | T:17 [U] | ❌ 7AAP_A_T |
E:294 [THR] | F:600 [G] | A:687 [THR] | T:10 [C] | ❌ 7AAP_A_T |
E:291 [CYS] | F:600 [G] | A:684 [ASP] | T:10 [C] | ❌ 7AAP_A_T |
E:179 [SER] | F:601 [U] | A:560 [VAL] | T:11 [A] | ❌ 7AAP_A_T |
E:110 [LEU] | F:603 [U] | A:496 [ASN] | T:13 [A] | ❌ 4K4Z_E_F,G |
E:126 [LYS] | F:599 [G] | A:511 [LYS] | T:9 [U] | ❌ 4K4Z_E_F,G |
E:199 [HIS] | F:604 [C] | A:580 [ALA] | T:14 [A] | ❌ 4K4Z_E_F,G |
E:289 [SER] | F:601 [U] | A:682 [SER] | T:11 [A] | ❌ 4K4Z_E_F,G |
E:457 [LYS] | F:606 [C] | A:924 [MET] | T:16 [U] | ❌ 4K4Z_E_F,G |
E:457 [LYS] | F:605 [U] | A:924 [MET] | T:15 [C] | ❌ 4K4Z_E_F,G |
E:448 [LEU] | F:608 [U] | A:915 [TYR] | T:18 [A] | ❌ 4K4Z_E:448, 4K4Z_F:608 no longer at interface |
E:24 [LYS] | F:598 [A] | A:412 [PRO] | T:8 [U] | ❌ 7AAP_A:412 no longer at interface |
E:24 [LYS] | F:599 [G] | A:412 [PRO] | T:9 [U] | ❌ 7AAP_A:412 no longer at interface |
E:327 [TYR] | F:602 [C] | A:758 [LEU] | T:12 [U] | ❌ 7AAP_A:758 no longer at interface |
E:327 [TYR] | F:603 [U] | A:758 [LEU] | T:13 [A] | ❌ 7AAP_A:758 no longer at interface |
E:209 [ALA] | F:603 [U] | A:588 [VAL] | T:13 [A] | ❌ 7AAP_A:588 no longer at interface |
E:160 [ASP] | F:599 [G] | A:546 [TYR] | T:9 [U] | ❌ 7AAP_A:546 no longer at interface |
E:113 [THR] | F:600 [G] | A:499 [ASP] | T:10 [C] | ❌ 7AAP_A:499 no longer at interface |
E:22 [LYS] | F:599 [G] | A:410 [VAL] | T:9 [U] | ❌ 7AAP_A:410 no longer at interface |
E:17 [ILE] | F:598 [A] | A:405 [VAL] | T:8 [U] | ❌ 7AAP_A:405 no longer at interface |
E:195 [TYR] | F:602 [C] | A:576 [LEU] | T:12 [U] | ❌ 7AAP_A:576 no longer at interface |
E:184 [SER] | F:601 [U] | A:565 [THR] | T:11 [A] | ❌ 7AAP_A:565 no longer at interface |
E:184 [SER] | F:602 [C] | A:565 [THR] | T:12 [U] | ❌ 7AAP_A:565 no longer at interface |
E:23 [THR] | F:599 [G] | A:411 [LYS] | T:9 [U] | ❌ 7AAP_A:411 no longer at interface |
E:127 [LYS] | F:600 [G] | A:512 [ALA] | T:10 [C] | ❌ 7AAP_A:512 no longer at interface |
E:127 [LYS] | F:601 [U] | A:512 [ALA] | T:11 [A] | ❌ 7AAP_A:512 no longer at interface |
E:18 [ASN] | F:598 [A] | A:406 [ALA] | T:8 [U] | ❌ 7AAP_A:406 no longer at interface |
E:43 [LEU] | F:599 [G] | A:444 [GLN] | T:9 [U] | ❌ 7AAP_A:444 no longer at interface |
E:155 [VAL] | F:599 [G] | A:541 [GLN] | T:9 [U] | ❌ 4K4Z_E:155 no longer at interface |
E:155 [VAL] | F:598 [A] | A:541 [GLN] | T:8 [U] | ❌ 4K4Z_E:155 no longer at interface |
E:196 [LYS] | F:602 [C] | A:577 [LYS] | T:12 [U] | ❌ 4K4Z_E:196 no longer at interface |
E:196 [LYS] | F:603 [U] | A:577 [LYS] | T:13 [A] | ❌ 4K4Z_E:196 no longer at interface |
E:202 [PRO] | F:604 [C] | A:583 [ARG] | T:14 [A] | ❌ 4K4Z_E:202 no longer at interface |
E:215 [ASP] | F:604 [C] | A:594 [PHE] | T:14 [A] | ❌ 4K4Z_E:215 no longer at interface |
E:215 [ASP] | F:605 [U] | A:594 [PHE] | T:15 [C] | ❌ 4K4Z_E:215 no longer at interface |
E:296 [ILE] | F:602 [C] | A:689 [TYR] | T:12 [U] | ❌ 4K4Z_E:296 no longer at interface |
E:296 [ILE] | F:603 [U] | A:689 [TYR] | T:13 [A] | ❌ 4K4Z_E:296 no longer at interface |
E:448 [LEU] | F:607 [G] | A:915 [TYR] | T:17 [U] | ❌ 4K4Z_E:448 no longer at interface |
E:453 [THR] | F:607 [G] | A:920 [PHE] | T:17 [U] | ❌ 4K4Z_E:453 no longer at interface |
E:453 [THR] | F:606 [C] | A:920 [PHE] | T:16 [U] | ❌ 4K4Z_E:453 no longer at interface |
Properties of this pair
Common ECOD label(s) |
Common RFAM label(s) |
Interface TM-score |
Interface RMSD |
Percentage identity |
Protein TM-score |
RNA TM-score |
Protein coverage |
RNA coverage |
Percentage conservation |
Apolar conservation |
H-bond conservation |
Percentage switching out |
---|---|---|---|---|---|---|---|---|---|---|---|---|
Adenylyl and guanylyl cyclase catalytic domain-like | 0.79 | 1.77 | 0.00 | 0.81 | 0.6 | 0.79 | 0.91 | 0.61 | 0.56 | 0.33 | 0.65 |
Other pairs involving 4K4Z_E_F,G or 7AAP_A_T
Total number of entries: 18