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All interfaces > All interologs > Interface groups > group130 > 7BV2_A_T

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Licorice
Surface

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Licorice
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Chain
Chain (with hetatm)
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Hydrophobicity
Electrostatics (surface only)
Conservation*

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Rim - Core

Contacts -

7BV2_A
7BV2_T
Distance
Base Pair
Hbond nuc:res
Base Stacking
Residue conservation
A:496 [ASN] T:12 [U] 4.36 P:19 [A] 76.64
A:496 [ASN] T:13 [A] 2.64 P:18 [U] 76.64
A:497 [ASN] T:11 [A] 4.98 P:20 [U] 98.31
A:500 [LYS] T:10 [U] 3.93 94.77
A:500 [LYS] T:11 [A] 3.1 P:20 [U] 94.77
A:501 [SER] T:8 [U] 4.77 96.71
A:501 [SER] T:9 [U] 2.99 96.71
A:501 [SER] T:10 [U] 3.32 96.71
A:501 [SER] T:11 [A] 4.73 P:20 [U] 96.71
A:507 [ASN] T:8 [U] 4.44 98.31
A:507 [ASN] T:9 [U] 3.43 98.31
A:511 [LYS] T:9 [U] 4.33 92.45
A:541 [GLN] T:8 [U] 4.49 92.46
A:541 [GLN] T:9 [U] 3.95 92.46
A:543 [ASN] T:8 [U] 3.54 89.46
A:543 [ASN] T:9 [U] 3.39 89.46
A:544 [LEU] T:9 [U] 4.93 84.03
A:545 [LYS] T:9 [U] 4.97 98.32
A:545 [LYS] T:10 [U] 3.86 98.32
A:557 [VAL] T:9 [U] 4.13 91.29
A:557 [VAL] T:10 [U] 3.33 91.29
A:558 [ALA] T:10 [U] 3.52 sugar:BB 91.82
A:559 [GLY] T:10 [U] 3.76 90.98
A:560 [VAL] T:10 [U] 3.84 sugar:BB 95.11
A:565 [THR] T:11 [A] 4.9 P:20 [U] 97.52
A:569 [ARG] T:11 [A] 3.85 P:20 [U] 98.51
A:569 [ARG] T:12 [U] 3.45 P:19 [A] 98.51
A:577 [LYS] T:13 [A] 3.13 P:18 [U] 94.34
A:580 [ALA] T:13 [A] 3.86 P:18 [U] 84.34
A:580 [ALA] T:14 [A] 4.87 P:17 [U] 84.34
A:583 [ARG] T:14 [A] 4.75 P:17 [U] 94.81
A:589 [ILE] T:12 [U] 4.49 P:19 [A] 98.72
A:589 [ILE] T:13 [A] 4.48 P:18 [U] 98.72
A:590 [GLY] T:13 [A] 3.17 P:18 [U] 97.88
A:590 [GLY] T:14 [A] 3.28 P:17 [U] 97.88
A:591 [THR] T:13 [A] 4.46 P:18 [U] 94.28
A:591 [THR] T:14 [A] 4.7 P:17 [U] 94.28
A:592 [SER] T:14 [A] 2.61 P:17 [U] sugar:SC 90.1
A:592 [SER] T:15 [C] 3.81 P:16 [G] 90.1
A:593 [LYS] T:14 [A] 4.67 P:17 [U] 98.35
A:594 [PHE] T:14 [A] 3.79 P:17 [U] 92.37
A:594 [PHE] T:15 [C] 3.61 P:16 [G] 92.37
A:595 [TYR] T:15 [C] 4.1 P:16 [G] 85.65
A:595 [TYR] T:16 [U] 2.87 P:15 [A] 85.65
A:682 [SER] T:10 [U] 2.84 base:SC 95.33
A:682 [SER] T:11 [A] 3.73 P:20 [U] 95.33
A:683 [GLY] T:10 [U] 3.11 base:BB, sugar:BB 96.43
A:683 [GLY] T:11 [A] 3.04 P:20 [U] 96.43
A:684 [ASP] T:11 [A] 3.13 P:20 [U] sugar:BB 96.0
A:685 [ALA] T:11 [A] 3.21 P:20 [U] sugar:BB 92.05
A:685 [ALA] T:12 [U] 4.56 P:19 [A] 92.05
A:686 [THR] T:11 [A] 4.67 P:20 [U] 90.38
A:689 [TYR] T:12 [U] 3.27 P:19 [A] sugar:SC 82.27
A:689 [TYR] T:13 [A] 4.13 P:18 [U] 82.27
A:857 [GLU] T:17 [U] 4.25 P:14 [A] 97.78
A:860 [VAL] T:16 [U] 4.25 P:15 [A] 93.76
A:861 [SER] T:16 [U] 4.96 P:15 [A] 94.65
A:864 [ILE] T:15 [C] 4.39 P:16 [G] 98.25
A:864 [ILE] T:16 [U] 3.9 P:15 [A] 98.25
A:913 [SER] T:17 [U] 4.76 P:14 [A] 47.78
A:915 [TYR] T:17 [U] 4.74 P:14 [A] 88.48
A:920 [PHE] T:16 [U] 3.79 P:15 [A] 96.99
A:920 [PHE] T:17 [U] 3.63 P:14 [A] 96.99
A:924 [MET] T:15 [C] 3.36 P:16 [G] 77.08
A:924 [MET] T:16 [U] 3.96 P:15 [A] 77.08

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*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)

Properties of this interface

Interolog group ID Structure ID Structure description
 UniProt ID
 		ECOD label(s)
 		RFAM label(s)
 		Is ribosome? RCSB PDB link
group130 7BV2_A_T A: RNA-directed RNA polymerase, Severe acute respiratory syndrome coronavirus 2 (genetically engineered) T: Templete, Severe acute respiratory syndrome coronavirus 2 (synthetic) P0DTD1 Adenylyl and guanylyl cyclase catalytic domain-like ✘

Interologs

Total number of interologs for this interface: 9

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
4K4Z_E_F,G 7BV2_A_T 0.60 0.79 1.53 0.0 Adenylyl and guanylyl cyclase catalytic domain-like compare
5Y6Z_A_B,C 7BV2_A_T 0.59 0.8 1.4 0.0 Adenylyl and guanylyl cyclase catalytic domain-like compare
4K4S_A_B,C 7BV2_A_T 0.60 0.79 1.56 0.0 Adenylyl and guanylyl cyclase catalytic domain-like compare
3OL9_A_B,C 7BV2_A_T 0.62 0.79 1.49 0.0 Adenylyl and guanylyl cyclase catalytic domain-like compare
6KWQ_A_B,C 7BV2_A_T 0.63 0.78 1.32 0.0 Adenylyl and guanylyl cyclase catalytic domain-like compare
5F8H_A_B,C 7BV2_A_T 0.70 0.8 1.27 0.1 Adenylyl and guanylyl cyclase catalytic domain-like compare
6LSF_A_B,C 7BV2_A_T 0.69 0.8 1.31 0.1 Adenylyl and guanylyl cyclase catalytic domain-like compare
6LSG_A_B,C 7BV2_A_T 0.59 0.8 1.18 0.12 Adenylyl and guanylyl cyclase catalytic domain-like compare
7AAP_A_T 7BV2_A_T 0.96 0.99 0.42 0.9 Adenylyl and guanylyl cyclase catalytic domain-like compare