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All interfaces > All interologs > Interface groups > group131 > 1JJ2_A_0

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Protein

Cartoon
Licorice
Surface

RNA

Cartoon
Licorice
Surface

Color

Chain
Chain (with hetatm)
Chainbow
Hydrophobicity
Electrostatics (surface only)
Conservation*

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Rim - Core

Contacts -

1JJ2_A
1JJ2_0
Distance
Base Pair
Hbond nuc:res
Base Stacking
Residue conservation
A:1 [GLY] 0:869 [G] 4.85 86.98
A:1 [GLY] 0:886 [A] 3.14 base:BB 86.98
A:1 [GLY] 0:2114 [C] 3.12 0:2471 [G] 86.98
A:1 [GLY] 0:2115 [U] 4.84 0:2470 [A] 86.98
A:1 [GLY] 0:2273 [C] 2.68 0:2121 [G] 86.98
A:1 [GLY] 0:2274 [A] 4.52 0:2120 [U] 86.98
A:2 [ARG] 0:871 [G] 2.69 0:879 [C] base:SC 92.15
A:2 [ARG] 0:872 [U] 2.8 0:878 [G] base:SC 92.15
A:2 [ARG] 0:873 [G] 3.44 0:876 [A] base/AA stacks 92.15
A:2 [ARG] 0:877 [G] 4.27 92.15
A:2 [ARG] 0:878 [G] 2.88 0:872 [U] base:SC 92.15
A:2 [ARG] 0:879 [C] 3.7 0:871 [G] 92.15
A:2 [ARG] 0:886 [A] 3.75 92.15
A:2 [ARG] 0:2114 [C] 4.85 0:2471 [G] 92.15
A:2 [ARG] 0:2273 [C] 4.13 0:2121 [G] 92.15
A:3 [ARG] 0:870 [G] 2.66 0:880 [C] 74.29
A:3 [ARG] 0:871 [G] 3.41 0:879 [C] 74.29
A:3 [ARG] 0:873 [G] 4.56 0:876 [A] 74.29
A:3 [ARG] 0:1862 [C] 3.45 0:1867 [G] 74.29
A:3 [ARG] 0:1863 [G] 2.65 0:1866 [A] 74.29
A:4 [ILE] 0:1881 [A] 4.49 0:1850 [U] 77.65
A:5 [GLN] 0:875 [A] 4.1 59.76
A:6 [GLY] 0:1861 [C] 2.86 0:1868 [G] sugar:BB 57.82
A:6 [GLY] 0:1880 [C] 3.54 0:1851 [G] 57.82
A:7 [GLN] 0:871 [G] 4.68 0:879 [C] 89.5
A:7 [GLN] 0:1861 [C] 3.43 0:1868 [G] 89.5
A:7 [GLN] 0:1862 [C] 2.84 0:1867 [G] 89.5
A:7 [GLN] 0:2272 [G] 4.76 0:2122 [C] 89.5
A:8 [ARG] 0:871 [G] 2.81 0:879 [C] 91.04
A:8 [ARG] 0:872 [U] 2.83 0:878 [G] base:SC 91.04
A:8 [ARG] 0:873 [G] 2.77 0:876 [A] base:SC 91.04
A:8 [ARG] 0:1861 [C] 4.91 0:1868 [G] 91.04
A:9 [ARG] 0:1860 [U] 2.86 0:1869 [A] base:SC 91.27
A:9 [ARG] 0:1861 [C] 4.34 0:1868 [G] 91.27
A:9 [ARG] 0:1869 [A] 3.76 0:1860 [U] 91.27
A:9 [ARG] 0:1870 [C] 3.35 0:1859 [A] sugar:SC 91.27
A:9 [ARG] 0:1879 [U] 3.29 0:1852 [A] 91.27
A:9 [ARG] 0:1880 [C] 3.35 0:1851 [G] 91.27
A:10 [GLY] 0:1861 [C] 3.1 0:1868 [G] sugar:BB 94.26
A:10 [GLY] 0:1862 [C] 3.29 0:1867 [G] 94.26
A:10 [GLY] 0:1868 [G] 2.88 0:1861 [C] base:BB 94.26
A:10 [GLY] 0:1869 [A] 3.9 0:1860 [U] 94.26
A:11 [ARG] 0:866 [U] 3.04 0:780 [A] sugar:SC 67.22
A:11 [ARG] 0:867 [A] 2.96 67.22
A:11 [ARG] 0:870 [G] 4.59 0:880 [C] 67.22
A:11 [ARG] 0:871 [G] 3.58 0:879 [C] 67.22
A:11 [ARG] 0:872 [U] 4.43 0:878 [G] 67.22
A:11 [ARG] 0:1861 [C] 4.94 0:1868 [G] 67.22
A:11 [ARG] 0:1862 [C] 3.61 0:1867 [G] 67.22
A:11 [ARG] 0:1868 [G] 4.86 0:1861 [C] 67.22
A:11 [ARG] 0:1869 [A] 4.71 0:1860 [U] 67.22
A:12 [GLY] 0:1869 [A] 3.43 0:1860 [U] 90.06
A:13 [THR] 0:866 [U] 3.66 0:780 [A] 77.14
A:13 [THR] 0:871 [G] 4.65 0:879 [C] 77.14
A:13 [THR] 0:872 [U] 2.77 0:878 [G] 77.14
A:14 [SER] 0:782 [G] 2.66 0:864 [U] base:SC, sugar:SC 27.38
A:14 [SER] 0:783 [C] 3.53 0:863 [G] sugar:SC 27.38
A:14 [SER] 0:865 [G] 4.36 0:781 [C] 27.38
A:15 [THR] 0:781 [C] 3.07 0:865 [G] sugar:SC 37.24
A:15 [THR] 0:782 [G] 3.3 0:864 [U] sugar:SC 37.24
A:15 [THR] 0:865 [G] 4.34 0:781 [C] 37.24
A:15 [THR] 0:872 [U] 4.44 0:878 [G] 37.24
A:15 [THR] 0:873 [G] 3.75 0:876 [A] 37.24
A:16 [PHE] 0:872 [U] 3.74 0:878 [G] 47.43
A:16 [PHE] 0:873 [G] 4.53 0:876 [A] 47.43
A:16 [PHE] 0:1869 [A] 4.04 0:1860 [U] 47.43
A:16 [PHE] 0:1870 [C] 3.46 0:1859 [A] 47.43
A:17 [ARG] 0:865 [G] 4.12 0:781 [C] 66.72
A:17 [ARG] 0:1459 [A] 4.95 0:1484 [G] 66.72
A:17 [ARG] 0:1460 [G] 2.82 0:1483 [C] 66.72
A:17 [ARG] 0:1869 [A] 3.31 0:1860 [U] 66.72
A:17 [ARG] 0:1870 [C] 3.39 0:1859 [A] 66.72
A:18 [ALA] 0:1869 [A] 4.86 0:1860 [U] 62.92
A:18 [ALA] 0:1870 [C] 2.91 0:1859 [A] 62.92
A:18 [ALA] 0:1871 [U] 3.74 0:1858 [A] 62.92
A:18 [ALA] 0:1872 [C] 4.08 62.92
A:20 [SER] 0:1870 [C] 4.42 0:1859 [A] 62.95
A:20 [SER] 0:1871 [U] 4.48 0:1858 [A] 62.95
A:20 [SER] 0:1872 [C] 2.52 62.95
A:21 [HIS] 0:783 [C] 3.35 0:863 [G] 54.48
A:21 [HIS] 0:784 [A] 2.95 0:862 [U] 54.48
A:21 [HIS] 0:1459 [A] 4.03 0:1484 [G] 54.48
A:21 [HIS] 0:1872 [C] 4.09 54.48
A:22 [ARG] 0:783 [C] 3.96 0:863 [G] 57.73
A:22 [ARG] 0:784 [A] 3.27 0:862 [U] 57.73
A:22 [ARG] 0:1654 [U] 4.41 57.73
A:22 [ARG] 0:1655 [G] 4.48 0:1651 [C] 57.73
A:23 [TYR] 0:1871 [U] 4.24 0:1858 [A] 51.79
A:23 [TYR] 0:1872 [C] 3.52 51.79
A:24 [LYS] 0:1654 [U] 3.58 sugar:SC 0.98
A:24 [LYS] 0:1655 [G] 4.43 0:1651 [C] 0.98
A:24 [LYS] 0:1872 [C] 3.17 0.98
A:25 [ALA] 0:1872 [C] 2.93 52.12
A:25 [ALA] 0:1873 [G] 4.3 0:1856 [C] 52.12
A:26 [ASP] 0:1872 [C] 3.31 7.62
A:26 [ASP] 0:1873 [G] 3.88 0:1856 [C] 7.62
A:27 [LEU] 0:1872 [C] 4.31 62.03
A:27 [LEU] 0:1873 [G] 3.67 0:1856 [C] 62.03
A:31 [LYS] 0:2249 [G] 4.95 0:2252 [A] 9.74
A:31 [LYS] 0:2250 [G] 3.03 9.74
A:32 [VAL] 0:2250 [G] 4.32 0.33
A:33 [GLU] 0:2250 [G] 3.88 5.43
A:47 [HIS] 0:1652 [C] 4.97 80.37
A:47 [HIS] 0:1653 [A] 3.08 80.37
A:47 [HIS] 0:1654 [U] 3.01 base/AA stacks 80.37
A:48 [ASP] 0:1654 [U] 4.94 84.88
A:48 [ASP] 0:1872 [C] 4.99 84.88
A:49 [PRO] 0:1654 [U] 3.44 76.41
A:49 [PRO] 0:1655 [G] 4.29 0:1651 [C] 76.41
A:50 [ALA] 0:1872 [C] 3.96 74.64
A:50 [ALA] 0:1873 [G] 3.99 0:1856 [C] 74.64
A:50 [ALA] 0:1878 [G] 4.93 0:1853 [C] 74.64
A:51 [ARG] 0:1873 [G] 3.3 0:1856 [C] 86.89
A:51 [ARG] 0:1874 [U] 3.31 0:1855 [G] 86.89
A:52 [SER] 0:1652 [C] 3.25 71.9
A:52 [SER] 0:1653 [A] 2.64 71.9
A:69 [LEU] 0:1874 [U] 4.82 0:1855 [G] 64.54
A:110 [SER] 0:1856 [C] 4.32 0:1873 [G] 14.29
A:110 [SER] 0:1857 [A] 2.92 14.29
A:111 [SER] 0:2248 [C] 2.7 0:2253 [G] sugar:SC 45.19
A:112 [PRO] 0:2248 [C] 3.13 0:2253 [G] sugar:BB 75.62
A:112 [PRO] 0:2249 [G] 4.19 0:2252 [A] 75.62
A:112 [PRO] 0:2254 [G] 4.74 0:2247 [C] 75.62
A:113 [GLY] 0:2248 [C] 4.55 0:2253 [G] 64.59
A:113 [GLY] 0:2249 [G] 3.43 0:2252 [A] 64.59
A:114 [ASP] 0:2248 [C] 4.26 0:2253 [G] 76.3
A:114 [ASP] 0:2249 [G] 4.01 0:2252 [A] 76.3
A:116 [GLY] 0:1874 [U] 4.74 0:1855 [G] 83.03
A:117 [LYS] 0:1855 [G] 4.15 0:1874 [U] 64.9
A:117 [LYS] 0:1856 [C] 3.83 0:1873 [G] 64.9
A:117 [LYS] 0:1857 [A] 3.59 64.9
A:117 [LYS] 0:1874 [U] 2.63 0:1855 [G] sugar:BB 64.9
A:118 [PHE] 0:1855 [G] 3.29 0:1874 [U] 40.14
A:118 [PHE] 0:1856 [C] 4.34 0:1873 [G] 40.14
A:118 [PHE] 0:1874 [U] 3.49 0:1855 [G] 40.14
A:118 [PHE] 0:1875 [A] 4.05 40.14
A:119 [ALA] 0:1855 [G] 4.32 0:1874 [U] 63.26
A:119 [ALA] 0:1874 [U] 3.3 0:1855 [G] 63.26
A:119 [ALA] 0:1875 [A] 2.96 63.26
A:120 [ARG] 0:1873 [G] 2.79 0:1856 [C] 90.5
A:120 [ARG] 0:1874 [U] 2.77 0:1855 [G] 90.5
A:120 [ARG] 0:1875 [A] 2.81 90.5
A:121 [ALA] 0:1874 [U] 3.57 0:1855 [G] 77.32
A:121 [ALA] 0:1875 [A] 2.98 77.32
A:121 [ALA] 0:1876 [C] 3.39 77.32
A:121 [ALA] 0:1877 [G] 4.01 0:1854 [C] 77.32
A:122 [SER] 0:1876 [C] 2.97 sugar:BB 82.32
A:123 [GLY] 0:1876 [C] 3.21 98.74
A:124 [VAL] 0:1875 [A] 3.58 69.43
A:124 [VAL] 0:1876 [C] 3.54 69.43
A:140 [LEU] 0:1855 [G] 3.56 0:1874 [U] 76.88
A:141 [PRO] 0:1855 [G] 3.29 0:1874 [U] 80.38
A:141 [PRO] 0:1875 [A] 3.51 80.38
A:141 [PRO] 0:1876 [C] 3.77 80.38
A:142 [SER] 0:1855 [G] 2.68 0:1874 [U] base:SC, base:BB 99.0
A:142 [SER] 0:1875 [A] 3.14 99.0
A:144 [GLU] 0:1855 [G] 2.65 0:1874 [U] sugar:SC, sugar:SC 69.18
A:146 [LYS] 0:1855 [G] 2.84 0:1874 [U] sugar:SC 71.06
A:146 [LYS] 0:1856 [C] 2.91 0:1873 [G] 71.06
A:149 [ASP] 0:2254 [G] 3.76 0:2247 [C] 63.53
A:149 [ASP] 0:2255 [A] 3.84 0:2246 [U] 63.53
A:161 [GLY] 0:1876 [C] 4.47 86.31
A:162 [GLY] 0:1876 [C] 3.56 43.07
A:163 [GLY] 0:1876 [C] 2.83 base:BB 67.84
A:164 [ARG] 0:1652 [C] 2.95 69.26
A:164 [ARG] 0:1876 [C] 3.05 base:BB, sugar:SC 69.26
A:164 [ARG] 0:1877 [G] 3.2 0:1854 [C] 69.26
A:165 [THR] 0:1652 [C] 3.94 20.09
A:165 [THR] 0:1876 [C] 3.38 base:BB, sugar:SC 20.09
A:165 [THR] 0:1877 [G] 4.3 0:1854 [C] 20.09
A:167 [LYS] 0:1651 [C] 4.17 0:1655 [G] 67.56
A:167 [LYS] 0:1652 [C] 2.83 base:BB 67.56
A:167 [LYS] 0:1848 [G] 4.63 0:1883 [U] 67.56
A:168 [PRO] 0:1652 [C] 4.67 67.95
A:168 [PRO] 0:1847 [A] 4.38 0:1884 [G] 67.95
A:168 [PRO] 0:1848 [G] 3.26 0:1883 [U] 67.95
A:169 [PHE] 0:1652 [C] 3.29 base/AA stacks 42.36
A:169 [PHE] 0:1847 [A] 3.37 0:1884 [G] 42.36
A:169 [PHE] 0:1848 [G] 3.05 0:1883 [U] 42.36
A:170 [VAL] 0:820 [G] 4.63 0:1830 [C] 50.52
A:170 [VAL] 0:1847 [A] 3.0 0:1884 [G] sugar:BB 50.52
A:170 [VAL] 0:1848 [G] 4.68 0:1883 [U] 50.52
A:171 [LYS] 0:819 [A] 4.6 0:794 [U] 89.7
A:171 [LYS] 0:820 [G] 2.51 0:1830 [C] 89.7
A:171 [LYS] 0:857 [A] 4.84 0:1831 [U] 89.7
A:171 [LYS] 0:1846 [U] 4.16 89.7
A:171 [LYS] 0:1847 [A] 3.94 0:1884 [G] 89.7
A:172 [ALA] 0:820 [G] 2.81 0:1830 [C] base:BB 97.61
A:172 [ALA] 0:857 [A] 3.36 0:1831 [U] 97.61
A:172 [ALA] 0:1831 [U] 4.62 0:857 [A] 97.61
A:172 [ALA] 0:1846 [U] 3.2 97.61
A:172 [ALA] 0:1847 [A] 4.11 0:1884 [G] 97.61
A:173 [GLY] 0:820 [G] 2.82 0:1830 [C] base:BB 92.36
A:173 [GLY] 0:857 [A] 3.29 0:1831 [U] 92.36
A:174 [ASN] 0:820 [G] 4.99 0:1830 [C] 41.17
A:174 [ASN] 0:857 [A] 4.53 0:1831 [U] 41.17
A:174 [ASN] 0:1652 [C] 4.95 41.17
A:175 [LYS] 0:1846 [U] 4.9 64.04
A:175 [LYS] 0:1847 [A] 2.73 0:1884 [G] 64.04
A:175 [LYS] 0:1848 [G] 4.71 0:1883 [U] 64.04
A:176 [HIS] 0:857 [A] 3.58 0:1831 [U] 63.72
A:176 [HIS] 0:858 [U] 4.43 0:788 [A] 63.72
A:177 [HIS] 0:857 [A] 2.93 0:1831 [U] 53.25
A:177 [HIS] 0:1653 [A] 3.26 base/AA stacks 53.25
A:178 [LYS] 0:1652 [C] 3.08 base:SC 42.06
A:178 [LYS] 0:1653 [A] 3.86 42.06
A:178 [LYS] 0:1877 [G] 4.01 0:1854 [C] 42.06
A:178 [LYS] 0:1878 [G] 4.16 0:1853 [C] 42.06
A:180 [LYS] 0:783 [C] 3.29 0:863 [G] 66.16
A:181 [ALA] 0:1653 [A] 4.65 87.5
A:181 [ALA] 0:1654 [U] 3.95 87.5
A:182 [ARG] 0:1871 [U] 4.01 0:1858 [A] 63.94
A:182 [ARG] 0:1878 [G] 2.92 0:1853 [C] 63.94
A:183 [GLY] 0:1870 [C] 3.34 0:1859 [A] 68.96
A:183 [GLY] 0:1871 [U] 2.94 0:1858 [A] 68.96
A:183 [GLY] 0:1879 [U] 3.71 0:1852 [A] 68.96
A:184 [THR] 0:1878 [G] 4.15 0:1853 [C] 70.79
A:184 [THR] 0:1879 [U] 2.56 0:1852 [A] 70.79
A:185 [LYS] 0:781 [C] 4.35 0:865 [G] 4.38
A:185 [LYS] 0:873 [G] 2.72 0:876 [A] 4.38
A:185 [LYS] 0:874 [A] 2.79 4.38
A:186 [TRP] 0:857 [A] 3.76 0:1831 [U] 72.0
A:186 [TRP] 0:1846 [U] 3.54 72.0
A:186 [TRP] 0:1847 [A] 3.39 0:1884 [G] 72.0
A:187 [PRO] 0:857 [A] 4.43 0:1831 [U] 92.07
A:187 [PRO] 0:874 [A] 3.21 92.07
A:187 [PRO] 0:1845 [A] 3.16 92.07
A:187 [PRO] 0:1846 [U] 3.61 92.07
A:188 [ASN] 0:1845 [A] 3.47 47.2
A:188 [ASN] 0:1846 [U] 2.88 47.2
A:188 [ASN] 0:1884 [G] 4.63 0:1847 [A] 47.2
A:189 [VAL] 0:874 [A] 3.43 90.6
A:189 [VAL] 0:875 [A] 3.43 90.6
A:189 [VAL] 0:1844 [C] 4.08 0:1832 [G] 90.6
A:189 [VAL] 0:1845 [A] 3.35 90.6
A:189 [VAL] 0:1882 [C] 4.9 0:1849 [G] 90.6
A:190 [ARG] 0:1844 [C] 3.42 0:1832 [G] 91.33
A:190 [ARG] 0:1845 [A] 2.59 91.33
A:190 [ARG] 0:1882 [C] 3.26 0:1849 [G] 91.33
A:190 [ARG] 0:1883 [U] 2.86 0:1848 [G] 91.33
A:190 [ARG] 0:1884 [G] 2.87 0:1847 [A] 91.33
A:191 [GLY] 0:1881 [A] 4.45 0:1850 [U] 93.54
A:191 [GLY] 0:1882 [C] 3.01 0:1849 [G] 93.54
A:192 [VAL] 0:1882 [C] 2.84 0:1849 [G] 77.12
A:192 [VAL] 0:1883 [U] 4.78 0:1848 [G] 77.12
A:193 [ALA] 0:875 [A] 2.98 89.45
A:193 [ALA] 0:876 [A] 4.01 0:873 [G] 89.45
A:193 [ALA] 0:1844 [C] 3.94 0:1832 [G] 89.45
A:193 [ALA] 0:1845 [A] 4.77 89.45
A:194 [MET] 0:875 [A] 3.18 88.96
A:195 [ASN] 0:876 [A] 4.3 0:873 [G] 97.04
A:195 [ASN] 0:877 [G] 3.14 sugar:SC base/AA stacks 97.04
A:196 [ALA] 0:2114 [C] 3.85 0:2471 [G] 90.45
A:196 [ALA] 0:2115 [U] 3.68 0:2470 [A] 90.45
A:196 [ALA] 0:2633 [A] 4.48 0:2630 [G] 90.45
A:197 [VAL] 0:877 [G] 3.55 73.63
A:197 [VAL] 0:886 [A] 4.58 73.63
A:197 [VAL] 0:2113 [G] 4.91 0:2472 [C] 73.63
A:197 [VAL] 0:2114 [C] 3.56 0:2471 [G] 73.63
A:197 [VAL] 0:2115 [U] 4.76 0:2470 [A] 73.63
A:198 [ASP] 0:873 [G] 2.97 0:876 [A] base:SC 79.99
A:198 [ASP] 0:875 [A] 3.54 79.99
A:199 [HIS] 0:1881 [A] 2.93 0:1850 [U] 98.54
A:200 [PRO] 0:2116 [U] 4.94 93.98
A:200 [PRO] 0:2272 [G] 4.4 0:2122 [C] 93.98
A:201 [PHE] 0:1881 [A] 3.49 0:1850 [U] 79.24
A:201 [PHE] 0:1882 [C] 3.52 0:1849 [G] 79.24
A:202 [GLY] 0:2633 [A] 4.2 0:2630 [G] 92.74
A:203 [GLY] 0:2633 [A] 3.28 0:2630 [G] 91.43
A:203 [GLY] 0:2634 [G] 3.36 0:2629 [C] 91.43
A:204 [GLY] 0:2633 [A] 3.03 0:2630 [G] 78.86
A:204 [GLY] 0:2634 [G] 2.45 0:2629 [C] 78.86
A:205 [GLY] 0:2625 [C] 3.51 0:2639 [G] 71.35
A:205 [GLY] 0:2634 [G] 3.06 0:2629 [C] base:BB 71.35
A:206 [ARG] 0:1944 [G] 4.88 0:1893 [C] 77.77
A:206 [ARG] 0:2625 [C] 4.5 0:2639 [G] 77.77
A:206 [ARG] 0:2626 [C] 3.64 0:2638 [G] 77.77
A:206 [ARG] 0:2628 [U] 4.46 0:2635 [A] 77.77
A:206 [ARG] 0:2629 [C] 3.54 0:2634 [G] 77.77
A:206 [ARG] 0:2630 [G] 2.37 0:2633 [A] base:SC 77.77
A:206 [ARG] 0:2632 [G] 4.75 77.77
A:206 [ARG] 0:2634 [G] 4.28 0:2629 [C] 77.77
A:207 [GLN] 0:1843 [A] 4.09 0:1833 [U] 68.83
A:207 [GLN] 0:1844 [C] 2.96 0:1832 [G] 68.83
A:207 [GLN] 0:1883 [U] 4.35 0:1848 [G] 68.83
A:207 [GLN] 0:2012 [U] 3.44 sugar:BB 68.83
A:207 [GLN] 0:2625 [C] 3.71 0:2639 [G] 68.83
A:207 [GLN] 0:2626 [C] 4.84 0:2638 [G] 68.83
A:208 [HIS] 0:1943 [C] 4.85 0:1896 [G] 76.06
A:208 [HIS] 0:1944 [G] 2.62 0:1893 [C] 76.06
A:208 [HIS] 0:2012 [U] 4.38 76.06
A:208 [HIS] 0:2630 [G] 3.47 0:2633 [A] base:SC 76.06
A:208 [HIS] 0:2632 [G] 3.47 76.06
A:208 [HIS] 0:2633 [A] 4.34 0:2630 [G] 76.06
A:209 [PRO] 0:1943 [C] 3.64 0:1896 [G] 49.22
A:209 [PRO] 0:1944 [G] 3.26 0:1893 [C] 49.22
A:210 [GLY] 0:1943 [C] 3.8 0:1896 [G] 81.88
A:210 [GLY] 0:2631 [U] 3.76 81.88
A:210 [GLY] 0:2632 [G] 3.3 81.88
A:211 [LYS] 0:1943 [C] 3.19 0:1896 [G] 58.29
A:211 [LYS] 0:2116 [U] 3.47 58.29
A:211 [LYS] 0:2117 [U] 4.39 58.29
A:211 [LYS] 0:2271 [G] 4.68 58.29
A:211 [LYS] 0:2272 [G] 4.46 0:2122 [C] 58.29
A:211 [LYS] 0:2631 [U] 4.95 58.29
A:212 [PRO] 0:1897 [U] 4.73 0:1942 [A] 59.14
A:212 [PRO] 0:1898 [G] 3.32 0:1939 [U] 59.14
A:212 [PRO] 0:1942 [A] 3.71 0:1897 [U] 59.14
A:212 [PRO] 0:1943 [C] 2.96 0:1896 [G] 59.14
A:213 [LYS] 0:1881 [A] 3.6 0:1850 [U] 67.59
A:213 [LYS] 0:1882 [C] 3.52 0:1849 [G] sugar:SC 67.59
A:213 [LYS] 0:1941 [A] 4.87 67.59
A:213 [LYS] 0:1942 [A] 2.95 0:1897 [U] sugar:BB 67.59
A:213 [LYS] 0:1943 [C] 4.15 0:1896 [G] 67.59
A:214 [SER] 0:1898 [G] 2.59 0:1939 [U] base:SC, sugar:BB 75.5
A:214 [SER] 0:1899 [C] 3.25 0:1938 [G] 75.5
A:214 [SER] 0:1942 [A] 4.41 0:1897 [U] 75.5
A:215 [ILE] 0:1898 [G] 4.82 0:1939 [U] 58.06
A:215 [ILE] 0:1899 [C] 3.75 0:1938 [G] 58.06
A:215 [ILE] 0:1900 [A] 4.75 0:1937 [U] 58.06
A:216 [SER] 0:1899 [C] 3.42 0:1938 [G] 83.56
A:216 [SER] 0:1900 [A] 3.85 0:1937 [U] 83.56
A:217 [ARG] 0:1853 [C] 2.64 0:1878 [G] sugar:SC 86.78
A:217 [ARG] 0:1854 [C] 4.39 0:1877 [G] 86.78
A:217 [ARG] 0:1859 [A] 3.39 0:1870 [C] 86.78
A:217 [ARG] 0:1860 [U] 3.07 0:1869 [A] 86.78
A:217 [ARG] 0:1899 [C] 4.41 0:1938 [G] 86.78
A:217 [ARG] 0:1900 [A] 3.19 0:1937 [U] 86.78
A:217 [ARG] 0:2125 [G] 4.17 0:2268 [C] 86.78
A:218 [ASN] 0:2124 [G] 3.31 0:2269 [C] base:BB 56.04
A:218 [ASN] 0:2125 [G] 2.6 0:2268 [C] sugar:SC 56.04
A:218 [ASN] 0:2126 [C] 3.11 0:2267 [G] 56.04
A:218 [ASN] 0:2269 [C] 4.57 0:2124 [G] 56.04
A:219 [ALA] 0:1861 [C] 4.99 0:1868 [G] 80.06
A:220 [PRO] 0:1861 [C] 4.51 0:1868 [G] 72.88
A:220 [PRO] 0:2123 [A] 3.36 0:2270 [G] 72.88
A:220 [PRO] 0:2124 [G] 4.37 0:2269 [C] 72.88
A:220 [PRO] 0:2270 [G] 4.42 0:2123 [A] 72.88
A:220 [PRO] 0:2272 [G] 3.69 0:2122 [C] 72.88
A:221 [PRO] 0:1861 [C] 3.41 0:1868 [G] 77.54
A:221 [PRO] 0:1862 [C] 3.23 0:1867 [G] 77.54
A:221 [PRO] 0:2124 [G] 3.95 0:2269 [C] 77.54
A:221 [PRO] 0:2272 [G] 3.9 0:2122 [C] sugar:BB 77.54
A:222 [GLY] 0:1861 [C] 4.77 0:1868 [G] 86.95
A:222 [GLY] 0:2272 [G] 3.38 0:2122 [C] 86.95
A:223 [ARG] 0:2270 [G] 3.12 0:2123 [A] 63.72
A:223 [ARG] 0:2271 [G] 3.49 63.72
A:223 [ARG] 0:2272 [G] 3.25 0:2122 [C] 63.72
A:224 [LYS] 0:1860 [U] 2.85 0:1869 [A] 92.69
A:224 [LYS] 0:1861 [C] 3.37 0:1868 [G] 92.69
A:224 [LYS] 0:1880 [C] 4.6 0:1851 [G] 92.69
A:225 [VAL] 0:1880 [C] 3.44 0:1851 [G] 94.78
A:225 [VAL] 0:1881 [A] 3.47 0:1850 [U] 94.78
A:226 [GLY] 0:1851 [G] 3.96 0:1880 [C] 89.57
A:226 [GLY] 0:1880 [C] 2.75 0:1851 [G] sugar:BB, sugar:BB 89.57
A:226 [GLY] 0:1881 [A] 3.54 0:1850 [U] sugar:BB 89.57
A:227 [ASP] 0:1851 [G] 3.0 0:1880 [C] base:SC 50.56
A:227 [ASP] 0:1852 [A] 3.52 0:1879 [U] 50.56
A:227 [ASP] 0:1880 [C] 4.81 0:1851 [G] 50.56
A:227 [ASP] 0:1881 [A] 4.42 0:1850 [U] 50.56
A:227 [ASP] 0:1942 [A] 3.73 0:1897 [U] 50.56
A:228 [ILE] 0:1852 [A] 2.78 0:1879 [U] sugar:BB 82.82
A:228 [ILE] 0:1853 [C] 3.09 0:1878 [G] sugar:BB 82.82
A:228 [ILE] 0:1860 [U] 3.93 0:1869 [A] 82.82
A:228 [ILE] 0:1880 [C] 4.11 0:1851 [G] 82.82
A:229 [ALA] 0:1852 [A] 4.34 0:1879 [U] 81.37
A:229 [ALA] 0:1853 [C] 3.51 0:1878 [G] 81.37
A:229 [ALA] 0:1899 [C] 3.31 0:1938 [G] 81.37
A:229 [ALA] 0:1900 [A] 3.65 0:1937 [U] 81.37
A:230 [SER] 0:1852 [A] 3.24 0:1879 [U] 87.95
A:230 [SER] 0:1853 [C] 3.97 0:1878 [G] 87.95
A:230 [SER] 0:1898 [G] 4.7 0:1939 [U] 87.95
A:230 [SER] 0:1899 [C] 2.58 0:1938 [G] sugar:BB 87.95
A:230 [SER] 0:1900 [A] 3.24 0:1937 [U] 87.95
A:230 [SER] 0:1938 [G] 4.71 0:1899 [C] 87.95
A:231 [LYS] 0:1852 [A] 3.81 0:1879 [U] 81.65
A:231 [LYS] 0:1853 [C] 2.88 0:1878 [G] 81.65
A:231 [LYS] 0:1854 [C] 3.16 0:1877 [G] 81.65
A:231 [LYS] 0:1899 [C] 4.59 0:1938 [G] 81.65
A:231 [LYS] 0:1900 [A] 3.62 0:1937 [U] 81.65
A:231 [LYS] 0:1938 [G] 2.79 0:1899 [C] base:BB 81.65
A:231 [LYS] 0:1939 [U] 4.95 0:1898 [G] 81.65
A:232 [ARG] 0:1851 [G] 4.36 0:1880 [C] 80.94
A:232 [ARG] 0:1852 [A] 2.91 0:1879 [U] 80.94
A:232 [ARG] 0:1853 [C] 4.84 0:1878 [G] 80.94
A:232 [ARG] 0:1938 [G] 4.43 0:1899 [C] 80.94
A:232 [ARG] 0:1939 [U] 3.34 0:1898 [G] 80.94
A:232 [ARG] 0:1940 [C] 4.07 80.94
A:233 [THR] 0:1851 [G] 3.54 0:1880 [C] 91.04
A:233 [THR] 0:1852 [A] 4.39 0:1879 [U] 91.04
A:233 [THR] 0:1898 [G] 4.65 0:1939 [U] 91.04
A:233 [THR] 0:1939 [U] 2.76 0:1898 [G] sugar:BB, sugar:BB 91.04
A:233 [THR] 0:1940 [C] 3.17 91.04
A:233 [THR] 0:1942 [A] 3.0 0:1897 [U] sugar:SC 91.04
A:234 [GLY] 0:1851 [G] 3.22 0:1880 [C] sugar:BB 91.22
A:234 [GLY] 0:1852 [A] 4.98 0:1879 [U] 91.22
A:234 [GLY] 0:1939 [U] 4.67 0:1898 [G] 91.22
A:234 [GLY] 0:1940 [C] 3.81 91.22
A:234 [GLY] 0:1941 [A] 3.82 91.22
A:234 [GLY] 0:1942 [A] 2.78 0:1897 [U] 91.22
A:235 [ARG] 0:1850 [U] 3.12 0:1881 [A] 81.21
A:235 [ARG] 0:1851 [G] 3.22 0:1880 [C] 81.21
A:235 [ARG] 0:1940 [C] 4.09 81.21
A:235 [ARG] 0:1941 [A] 3.41 81.21
A:236 [GLY] 0:1939 [U] 3.55 0:1898 [G] 62.35
A:236 [GLY] 0:1940 [C] 3.2 62.35
A:236 [GLY] 0:1941 [A] 3.91 62.35
A:237 [GLY] 0:1939 [U] 3.76 0:1898 [G] 65.27
A:237 [GLY] 0:1940 [C] 4.85 65.27

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*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)

Properties of this interface

Interolog group ID Structure ID Structure description
 UniProt ID
 		ECOD label(s)
 		RFAM label(s)
 		Is ribosome? RCSB PDB link
group131 1JJ2_A_0 A: Ribosomal protein l2, Haloarcula marismortui (natural) 0: 23s rRNA, Haloarcula marismortui (natural) P20276 Nucleic acid-binding proteins & SH3 Archaeal large subunit ribosomal RNA ✔

Interologs

Total number of interologs for this interface: 11

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1JJ2_A_0 7OF0_D_A 0.47 0.93 4.29 0.16 Nucleic acid-binding proteins & SH3 compare
1JJ2_A_0 6AZ3_A_3 0.67 0.83 1.43 0.0 Nucleic acid-binding proteins & SH3 compare
1JJ2_A_0 7O7Y_BA_B5 0.83 0.94 1.22 0.56 Nucleic acid-binding proteins & SH3 compare
1JJ2_A_0 6AZ3_A_1,2 0.85 0.8 1.08 0.45 Nucleic acid-binding proteins & SH3 compare
1JJ2_A_0 6YSI_A_1 0.59 0.91 3.41 0.23 Nucleic acid-binding proteins & SH3 compare
1JJ2_A_0 4Y4O_1D_1A 0.55 0.93 3.52 0.28 Nucleic acid-binding proteins & SH3 compare
1JJ2_A_0 7K00_c_a 0.60 0.9 3.39 0.26 Nucleic acid-binding proteins & SH3 compare
1JJ2_A_0 1VQ8_A_0 0.99 1.0 0.27 0.99 Nucleic acid-binding proteins & SH3 Archaeal large subunit ribosomal RNA compare
1JJ2_A_0 7RYG_C_A 0.51 0.9 3.94 0.22 Nucleic acid-binding proteins & SH3 compare
1JJ2_A_0 1YHQ_A_0 1.00 1.0 0.19 1.0 Nucleic acid-binding proteins & SH3 Archaeal large subunit ribosomal RNA compare
1JJ2_A_0 6S0Z_C_A 0.58 0.93 3.7 0.25 Nucleic acid-binding proteins & SH3 compare