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All interfaces > All interologs > Interface groups > group131 > 1JJ2_A_0 vs 6AZ3_A_3

Interface analysis


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Common contacts -

1JJ2_A
1JJ2_0
6AZ3_A
6AZ3_3
Conserved?
A:47 [HIS] 0:1653 [A] A:50 [HIS] 3:196 [C] ✔
A:47 [HIS] 0:1654 [U] A:50 [HIS] 3:197 [G] ✔
A:164 [ARG] 0:1652 [C] A:174 [ARG] 3:195 [A] ✔
A:22 [ARG] 0:1655 [G] A:22 [LYS] 3:198 [C] ✔
A:168 [PRO] 0:1652 [C] A:178 [PRO] 3:195 [A] ✔
A:165 [THR] 0:1652 [C] A:175 [ILE] 3:195 [A] ✔
A:178 [LYS] 0:1652 [C] A:188 [ARG] 3:195 [A] ✔
A:178 [LYS] 0:1653 [A] A:188 [ARG] 3:196 [C] ✔
A:174 [ASN] 0:1652 [C] A:184 [ASN] 3:195 [A] ✔
A:169 [PHE] 0:1652 [C] A:179 [VAL] 3:195 [A] ✔
A:177 [HIS] 0:1653 [A] A:187 [TYR] 3:196 [C] ✔
A:167 [LYS] 0:1651 [C] A:177 [LYS] 3:194 [A] ✔
A:167 [LYS] 0:1652 [C] A:177 [LYS] 3:195 [A] ✔
A:49 [PRO] 0:1654 [U] A:52 [ALA] 3:197 [G] ✔
A:47 [HIS] 0:1652 [C] A:50 [HIS] 3:195 [A] ❌ 6AZ3_A_3
A:22 [ARG] 0:1654 [U] A:22 [LYS] 3:197 [G] ❌ 6AZ3_A_3
A:49 [PRO] 0:1655 [G] A:52 [ALA] 3:198 [C] ❌ 6AZ3_A_3
A:180 [LYS] 0:1655 [G] A:190 [ARG] 3:198 [C] ❌ 1JJ2_A_0
A:180 [LYS] 0:1653 [A] A:190 [ARG] 3:196 [C] ❌ 1JJ2_A_0
A:180 [LYS] 0:1654 [U] A:190 [ARG] 3:197 [G] ❌ 1JJ2_A_0
A:47 [HIS] 0:1655 [G] A:50 [HIS] 3:198 [C] ❌ 1JJ2_A_0
A:50 [ALA] 0:1653 [A] A:53 [GLY] 3:196 [C] ❌ 1JJ2_A_0
A:51 [ARG] 0:1653 [A] A:54 [ARG] 3:196 [C] ❌ 1JJ2_A_0
A:21 [HIS] 0:1656 [A] A:21 [HIS] 3:199 [A] ❌ 1JJ2_0:1656 no longer at interface
A:22 [ARG] 0:1656 [A] A:22 [LYS] 3:199 [A] ❌ 1JJ2_0:1656 no longer at interface
A:63 [GLY] 0:1528 [A] A:71 [ARG] 3:25 [A] ❌ 1JJ2_A:63, 1JJ2_0:1528 no longer at interface
A:63 [GLY] 0:1527 [A] A:71 [ARG] 3:24 [C] ❌ 1JJ2_A:63, 1JJ2_0:1527 no longer at interface
A:65 [ARG] 0:1528 [A] A:73 [LYS] 3:25 [A] ❌ 1JJ2_A:65, 1JJ2_0:1528 no longer at interface
A:65 [ARG] 0:1529 [G] A:73 [LYS] 3:26 [G] ❌ 1JJ2_A:65, 1JJ2_0:1529 no longer at interface
A:52 [SER] 0:1652 [C] A:55 [GLY] 3:195 [A] ❌ 6AZ3_A:55 no longer at interface
A:52 [SER] 0:1653 [A] A:55 [GLY] 3:196 [C] ❌ 6AZ3_A:55 no longer at interface
A:48 [ASP] 0:1654 [U] A:51 [GLU] 3:197 [G] ❌ 6AZ3_A:51 no longer at interface
A:181 [ALA] 0:1653 [A] A:191 [GLY] 3:196 [C] ❌ 6AZ3_A:191 no longer at interface
A:181 [ALA] 0:1654 [U] A:191 [GLY] 3:197 [G] ❌ 6AZ3_A:191 no longer at interface
A:24 [LYS] 0:1654 [U] A:24 [LEU] 3:197 [G] ❌ 6AZ3_A:24 no longer at interface
A:24 [LYS] 0:1655 [G] A:24 [LEU] 3:198 [C] ❌ 6AZ3_A:24 no longer at interface
A:166 [ASP] 0:1652 [C] A:176 [GLU] 3:195 [A] ❌ 1JJ2_A:166 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Nucleic acid-binding proteins & SH3 0.83 1.43 0.00 0.96 0.63 0.75 0.45 0.67 0.78 0.20 0.61


Other pairs involving 1JJ2_A_0 or 6AZ3_A_3

Total number of entries: 19

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1JJ2_A_0 7OF0_D_A 0.47 0.93 4.29 0.16 Nucleic acid-binding proteins & SH3 compare
1JJ2_A_0 6AZ3_A_3 0.67 0.83 1.43 0.0 Nucleic acid-binding proteins & SH3 compare
1JJ2_A_0 7O7Y_BA_B5 0.83 0.94 1.22 0.56 Nucleic acid-binding proteins & SH3 compare
1JJ2_A_0 6AZ3_A_1,2 0.85 0.8 1.08 0.45 Nucleic acid-binding proteins & SH3 compare
1JJ2_A_0 6YSI_A_1 0.59 0.91 3.41 0.23 Nucleic acid-binding proteins & SH3 compare
1JJ2_A_0 4Y4O_1D_1A 0.55 0.93 3.52 0.28 Nucleic acid-binding proteins & SH3 compare
1JJ2_A_0 7K00_c_a 0.60 0.9 3.39 0.26 Nucleic acid-binding proteins & SH3 compare
1JJ2_A_0 1VQ8_A_0 0.99 1.0 0.27 0.99 Nucleic acid-binding proteins & SH3 Archaeal large subunit ribosomal RNA compare
1JJ2_A_0 7RYG_C_A 0.51 0.9 3.94 0.22 Nucleic acid-binding proteins & SH3 compare
1JJ2_A_0 1YHQ_A_0 1.00 1.0 0.19 1.0 Nucleic acid-binding proteins & SH3 Archaeal large subunit ribosomal RNA compare
1JJ2_A_0 6S0Z_C_A 0.58 0.93 3.7 0.25 Nucleic acid-binding proteins & SH3 compare
1VQ8_A_0 6AZ3_A_3 0.68 0.83 1.45 0.0 Nucleic acid-binding proteins & SH3 compare
1YHQ_A_0 6AZ3_A_3 0.68 0.83 1.41 0.0 Nucleic acid-binding proteins & SH3 compare
4Y4O_1D_1A 6AZ3_A_3 0.47 0.68 3.83 0.1 Nucleic acid-binding proteins & SH3 compare
6AZ3_A_3 7O7Y_BA_B5 0.84 0.96 0.46 0.36 Nucleic acid-binding proteins & SH3 compare
6AZ3_A_3 6S0Z_C_A 0.39 0.72 3.6 0.09 Nucleic acid-binding proteins & SH3 compare
6AZ3_A_3 7RYG_C_A 0.42 0.69 3.02 0.1 Nucleic acid-binding proteins & SH3 compare
6AZ3_A_3 7K00_c_a 0.44 0.7 3.69 0.1 Nucleic acid-binding proteins & SH3 compare
6AZ3_A_3 6YSI_A_1 0.31 0.54 3.47 0.05 Nucleic acid-binding proteins & SH3 compare