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All interfaces > All interologs > Interface groups > group131 > 7O7Y_BA_B5

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Protein

Cartoon
Licorice
Surface

RNA

Cartoon
Licorice
Surface

Color

Chain
Chain (with hetatm)
Chainbow
Hydrophobicity
Electrostatics (surface only)
Conservation*

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Rim - Core

Contacts -

7O7Y_BA
7O7Y_B5
Distance
Base Pair
Hbond nuc:res
Base Stacking
Residue conservation
BA:2 [GLY] B5:1580 [OMG] 4.49 83.45
BA:2 [GLY] B5:1597 [A] 3.01 base:BB 83.45
BA:2 [GLY] B5:3651 [C] 3.02 B5:4128 [G] 83.45
BA:2 [GLY] B5:3652 [PSU] 4.32 B5:4127 [A] 83.45
BA:2 [GLY] B5:3931 [G] 3.13 B5:3658 [C] 83.45
BA:3 [ARG] B5:1582 [G] 3.28 B5:1590 [C] base:SC 93.88
BA:3 [ARG] B5:1583 [C] 3.29 B5:1589 [A] 93.88
BA:3 [ARG] B5:1584 [G] 3.37 B5:1587 [A] 93.88
BA:3 [ARG] B5:1588 [G] 3.62 93.88
BA:3 [ARG] B5:1589 [A] 4.17 B5:1583 [C] 93.88
BA:3 [ARG] B5:1590 [C] 3.75 B5:1582 [G] 93.88
BA:3 [ARG] B5:1597 [A] 3.82 93.88
BA:3 [ARG] B5:3651 [C] 4.72 B5:4128 [G] 93.88
BA:3 [ARG] B5:3931 [G] 4.14 B5:3658 [C] 93.88
BA:4 [VAL] B5:1581 [G] 3.58 B5:1591 [U] 77.15
BA:4 [VAL] B5:1582 [G] 3.26 B5:1590 [C] 77.15
BA:4 [VAL] B5:1583 [C] 4.77 B5:1589 [A] 77.15
BA:4 [VAL] B5:1584 [G] 4.36 B5:1587 [A] 77.15
BA:5 [ILE] B5:3420 [U] 4.9 B5:3388 [A] 80.42
BA:6 [ARG] B5:3420 [U] 3.14 B5:3388 [A] 72.32
BA:7 [GLY] B5:3398 [C] 4.93 B5:3408 [G] 69.71
BA:7 [GLY] B5:3399 [C] 3.53 B5:3407 [G] sugar:BB 69.71
BA:7 [GLY] B5:3419 [A] 3.51 B5:3389 [U] 69.71
BA:8 [GLN] B5:3399 [C] 2.79 B5:3407 [G] sugar:BB 90.73
BA:8 [GLN] B5:3400 [C] 2.8 B5:3406 [G] 90.73
BA:8 [GLN] B5:3930 [G] 4.49 B5:3659 [U] 90.73
BA:9 [ARG] B5:1582 [G] 3.56 B5:1590 [C] 89.71
BA:9 [ARG] B5:1583 [C] 2.78 B5:1589 [A] base/AA stacks 89.71
BA:9 [ARG] B5:1584 [G] 2.93 B5:1587 [A] base:SC 89.71
BA:9 [ARG] B5:1586 [A] 4.61 89.71
BA:9 [ARG] B5:3399 [C] 4.76 B5:3407 [G] 89.71
BA:10 [LYS] B5:3399 [C] 4.32 B5:3407 [G] 87.82
BA:10 [LYS] B5:3408 [G] 3.68 B5:3398 [C] sugar:BB 87.82
BA:10 [LYS] B5:3418 [G] 4.21 B5:3390 [C] 87.82
BA:10 [LYS] B5:3419 [A] 2.72 B5:3389 [U] 87.82
BA:11 [GLY] B5:3399 [C] 3.05 B5:3407 [G] sugar:BB 93.47
BA:11 [GLY] B5:3400 [C] 3.36 B5:3406 [G] 93.47
BA:11 [GLY] B5:3407 [G] 2.87 B5:3399 [C] base:BB 93.47
BA:11 [GLY] B5:3408 [G] 3.61 B5:3398 [C] 93.47
BA:12 [ALA] B5:3399 [C] 4.6 B5:3407 [G] 73.53
BA:12 [ALA] B5:3400 [C] 3.71 B5:3406 [G] 73.53
BA:12 [ALA] B5:3407 [G] 4.95 B5:3399 [C] 73.53
BA:12 [ALA] B5:3408 [G] 4.75 B5:3398 [C] 73.53
BA:13 [GLY] B5:3408 [G] 3.56 B5:3398 [C] 80.66
BA:14 [SER] B5:1576 [A] 4.51 B5:1493 [U] 70.37
BA:14 [SER] B5:1577 [U] 3.0 B5:1492 [A] sugar:SC 70.37
BA:14 [SER] B5:1582 [G] 4.53 B5:1590 [C] 70.37
BA:14 [SER] B5:1583 [C] 2.9 B5:1589 [A] 70.37
BA:15 [VAL] B5:1493 [U] 3.38 B5:1576 [A] 10.57
BA:15 [VAL] B5:1494 [G] 3.57 B5:1575 [U] 10.57
BA:15 [VAL] B5:1576 [A] 4.07 B5:1493 [U] 10.57
BA:15 [VAL] B5:1583 [C] 3.72 B5:1589 [A] 10.57
BA:15 [VAL] B5:1584 [G] 4.59 B5:1587 [A] 10.57
BA:16 [PHE] B5:1583 [C] 4.61 B5:1589 [A] 51.74
BA:16 [PHE] B5:1584 [G] 3.86 B5:1587 [A] 51.74
BA:16 [PHE] B5:3408 [G] 4.19 B5:3398 [C] 51.74
BA:16 [PHE] B5:3409 [U] 3.74 B5:3397 [G] 51.74
BA:17 [ARG] B5:1494 [G] 4.86 B5:1575 [U] 71.37
BA:17 [ARG] B5:1576 [A] 3.79 B5:1493 [U] sugar:SC 71.37
BA:17 [ARG] B5:2293 [G] 2.95 B5:2352 [C] 71.37
BA:17 [ARG] B5:3408 [G] 3.37 B5:3398 [C] 71.37
BA:17 [ARG] B5:3409 [U] 3.81 B5:3397 [G] 71.37
BA:18 [ALA] B5:3408 [G] 4.69 B5:3398 [C] 70.13
BA:18 [ALA] B5:3409 [U] 3.04 B5:3397 [G] 70.13
BA:18 [ALA] B5:3410 [G] 3.44 B5:3396 [G] 70.13
BA:18 [ALA] B5:3411 [U] 4.83 70.13
BA:19 [HIS] B5:1494 [G] 3.15 B5:1575 [U] sugar:SC 65.46
BA:19 [HIS] B5:1495 [C] 3.08 B5:1574 [G] 65.46
BA:20 [VAL] B5:3411 [U] 3.23 70.55
BA:21 [LYS] B5:1495 [C] 4.54 B5:1574 [G] 63.05
BA:21 [LYS] B5:1496 [C] 3.33 B5:1573 [G] 63.05
BA:21 [LYS] B5:1497 [U] 3.46 B5:1572 [G] 63.05
BA:21 [LYS] B5:2291 [G] 2.95 sugar:SC 63.05
BA:21 [LYS] B5:2292 [A] 4.23 B5:2353 [G] 63.05
BA:21 [LYS] B5:2586 [A] 3.26 sugar:SC 63.05
BA:21 [LYS] B5:2587 [A] 4.55 B5:2444 [A] 63.05
BA:22 [HIS] B5:1496 [C] 4.23 B5:1573 [G] 59.08
BA:22 [HIS] B5:1497 [U] 4.63 B5:1572 [G] 59.08
BA:22 [HIS] B5:2585 [G] 3.62 B5:2581 [C] 59.08
BA:22 [HIS] B5:2586 [A] 3.46 59.08
BA:23 [ARG] B5:3410 [G] 3.6 B5:3396 [G] 44.17
BA:23 [ARG] B5:3411 [U] 3.16 sugar:SC 44.17
BA:23 [ARG] B5:3412 [U] 4.25 B5:3394 [A] 44.17
BA:24 [LYS] B5:2584 [U] 4.94 42.62
BA:24 [LYS] B5:2585 [G] 2.89 B5:2581 [C] 42.62
BA:24 [LYS] B5:3411 [U] 4.17 42.62
BA:25 [GLY] B5:3411 [U] 2.98 base:BB 52.69
BA:25 [GLY] B5:3412 [U] 4.8 B5:3394 [A] 52.69
BA:26 [ALA] B5:3411 [U] 3.56 20.55
BA:26 [ALA] B5:3412 [U] 3.9 B5:3394 [A] 20.55
BA:27 [ALA] B5:3411 [U] 4.42 48.68
BA:27 [ALA] B5:3412 [U] 3.4 B5:3394 [A] 48.68
BA:28 [ARG] B5:3811 [U] 3.4 B5:3813 [A] 37.1
BA:31 [ALA] B5:3810 [G] 3.99 B5:3910 [C] 2.3
BA:31 [ALA] B5:3811 [U] 3.63 B5:3813 [A] 2.3
BA:32 [VAL] B5:3810 [G] 4.61 B5:3910 [C] 47.54
BA:33 [ASP] B5:3815 [G] 4.34 51.21
BA:34 [PHE] B5:3815 [G] 3.31 base/AA stacks 21.04
BA:34 [PHE] B5:3816 [C] 3.41 B5:3907 [G] 21.04
BA:37 [ARG] B5:3814 [G] 4.86 6.33
BA:37 [ARG] B5:3815 [G] 2.69 6.33
BA:37 [ARG] B5:3816 [C] 2.93 B5:3907 [G] 6.33
BA:37 [ARG] B5:3911 [C] 4.82 B5:3809 [G] 6.33
BA:38 [HIS] B5:3816 [C] 3.17 B5:3907 [G] 2.14
BA:38 [HIS] B5:3843 [G] 4.35 B5:3821 [G] 2.14
BA:39 [GLY] B5:3845 [U] 3.31 1.92
BA:40 [TYR] B5:3845 [U] 2.78 base:BB, base:BB base/AA stacks 21.72
BA:40 [TYR] B5:3846 [U] 3.38 21.72
BA:41 [ILE] B5:3845 [U] 4.88 40.2
BA:44 [ILE] B5:3849 [G] 3.29 42.51
BA:44 [ILE] B5:3850 [G] 3.95 42.51
BA:45 [VAL] B5:3849 [G] 4.44 85.23
BA:46 [LYS] B5:3849 [G] 3.33 base:BB 13.97
BA:46 [LYS] B5:3850 [G] 4.72 13.97
BA:50 [HIS] B5:2583 [U] 3.31 78.51
BA:50 [HIS] B5:2584 [U] 3.05 78.51
BA:51 [ASP] B5:2584 [U] 4.94 78.24
BA:51 [ASP] B5:3411 [U] 4.83 78.24
BA:52 [PRO] B5:2584 [U] 3.31 72.69
BA:52 [PRO] B5:2585 [G] 3.74 B5:2581 [C] 72.69
BA:53 [GLY] B5:2584 [U] 4.02 65.38
BA:54 [ARG] B5:3411 [U] 3.91 85.85
BA:54 [ARG] B5:3412 [U] 2.49 B5:3394 [A] 85.85
BA:54 [ARG] B5:3413 [G] 3.16 B5:3393 [G] 85.85
BA:64 [ARG] B5:3852 [G] 3.18 sugar:SC base/AA stacks 38.46
BA:65 [ASP] B5:3812 [G] 4.61 56.53
BA:67 [TYR] B5:3814 [G] 3.0 base/AA stacks 4.41
BA:67 [TYR] B5:3815 [G] 2.49 base:SC 4.41
BA:68 [ARG] B5:3812 [G] 3.26 base/AA stacks 34.34
BA:68 [ARG] B5:3814 [G] 3.43 34.34
BA:69 [PHE] B5:2436 [C] 4.2 B5:2595 [G] 10.11
BA:69 [PHE] B5:2437 [C] 3.0 B5:2594 [G] 10.11
BA:69 [PHE] B5:2595 [G] 4.44 B5:2436 [C] 10.11
BA:69 [PHE] B5:3852 [G] 3.22 10.11
BA:69 [PHE] B5:3853 [C] 3.42 base/AA stacks 10.11
BA:70 [LYS] B5:2346 [G] 3.09 base:SC 33.27
BA:70 [LYS] B5:2437 [C] 3.55 B5:2594 [G] 33.27
BA:70 [LYS] B5:2438 [C] 4.14 B5:2593 [G] 33.27
BA:70 [LYS] B5:3812 [G] 3.24 base:SC 33.27
BA:71 [LYS] B5:2437 [C] 4.28 B5:2594 [G] 6.88
BA:71 [LYS] B5:2438 [C] 3.17 B5:2593 [G] 6.88
BA:71 [LYS] B5:3851 [C] 4.49 6.88
BA:72 [ARG] B5:2346 [G] 2.91 base:SC 19.37
BA:72 [ARG] B5:3812 [G] 2.34 base:SC, base:SC 19.37
BA:84 [THR] B5:3849 [G] 3.26 60.65
BA:85 [GLY] B5:3849 [G] 3.34 sugar:BB 89.14
BA:87 [PHE] B5:3848 [U] 3.24 10.66
BA:87 [PHE] B5:3849 [G] 3.69 10.66
BA:87 [PHE] B5:3850 [G] 3.44 10.66
BA:89 [TYR] B5:3846 [U] 3.2 base/AA stacks 7.83
BA:89 [TYR] B5:3848 [U] 4.06 7.83
BA:93 [LYS] B5:3842 [C] 4.38 B5:3822 [G] 18.68
BA:93 [LYS] B5:3843 [G] 3.45 B5:3821 [G] 18.68
BA:93 [LYS] B5:3846 [U] 4.55 18.68
BA:94 [ALA] B5:3846 [U] 3.45 63.51
BA:95 [GLN] B5:3846 [U] 2.82 base:BB, sugar:SC base/AA stacks 8.57
BA:100 [ASN] B5:3846 [U] 4.01 86.89
BA:118 [GLU] B5:3393 [G] 3.36 B5:3413 [G] 8.71
BA:118 [GLU] B5:3394 [A] 2.82 B5:3412 [U] sugar:SC 8.71
BA:118 [GLU] B5:3413 [G] 2.92 B5:3393 [G] base:SC, base:SC 8.71
BA:119 [LYS] B5:3395 [A] 3.63 6.41
BA:119 [LYS] B5:3913 [G] 4.17 B5:3807 [C] 6.41
BA:120 [PRO] B5:3809 [G] 4.89 B5:3911 [C] 72.54
BA:120 [PRO] B5:3912 [G] 3.85 B5:3808 [C] 72.54
BA:120 [PRO] B5:3913 [G] 3.8 B5:3807 [C] 72.54
BA:121 [GLY] B5:3809 [G] 3.83 B5:3911 [C] 61.71
BA:121 [GLY] B5:3810 [G] 3.27 B5:3910 [C] 61.71
BA:122 [ASP] B5:3809 [G] 3.62 B5:3911 [C] 69.14
BA:122 [ASP] B5:3810 [G] 4.38 B5:3910 [C] 69.14
BA:123 [ARG] B5:3810 [G] 4.01 B5:3910 [C] 80.22
BA:123 [ARG] B5:3811 [U] 2.87 B5:3813 [A] 80.22
BA:125 [LYS] B5:3393 [G] 3.91 B5:3413 [G] 66.81
BA:125 [LYS] B5:3413 [G] 2.55 B5:3393 [G] sugar:BB 66.81
BA:126 [LEU] B5:3393 [G] 3.44 B5:3413 [G] 55.21
BA:126 [LEU] B5:3413 [G] 3.34 B5:3393 [G] 55.21
BA:126 [LEU] B5:3414 [A] 4.09 55.21
BA:127 [ALA] B5:3393 [G] 4.14 B5:3413 [G] 62.73
BA:127 [ALA] B5:3413 [G] 3.21 B5:3393 [G] 62.73
BA:127 [ALA] B5:3414 [A] 2.92 62.73
BA:128 [ARG] B5:3412 [U] 2.9 B5:3394 [A] 95.85
BA:128 [ARG] B5:3413 [G] 2.91 B5:3393 [G] 95.85
BA:128 [ARG] B5:3414 [A] 2.65 95.85
BA:129 [ALA] B5:3413 [G] 4.08 B5:3393 [G] 80.3
BA:129 [ALA] B5:3414 [A] 2.69 80.3
BA:129 [ALA] B5:3415 [C] 3.42 80.3
BA:129 [ALA] B5:3416 [G] 4.17 B5:3392 [C] 80.3
BA:130 [SER] B5:3415 [C] 2.82 sugar:BB, sugar:SC 80.84
BA:131 [GLY] B5:3415 [C] 3.19 98.01
BA:132 [ASN] B5:3414 [A] 3.44 69.46
BA:132 [ASN] B5:3415 [C] 2.55 69.46
BA:144 [LYS] B5:3913 [G] 4.56 B5:3807 [C] 33.77
BA:145 [LYS] B5:3913 [G] 4.64 B5:3807 [C] 18.68
BA:145 [LYS] B5:3914 [G] 2.9 B5:3806 [C] 18.68
BA:150 [LEU] B5:3393 [G] 3.41 B5:3413 [G] 73.06
BA:151 [PRO] B5:3393 [G] 3.23 B5:3413 [G] 74.53
BA:151 [PRO] B5:3414 [A] 3.52 74.53
BA:151 [PRO] B5:3415 [C] 4.09 74.53
BA:152 [SER] B5:3393 [G] 2.55 B5:3413 [G] base:SC, base:BB 98.89
BA:152 [SER] B5:3414 [A] 3.28 98.89
BA:154 [SER] B5:3393 [G] 4.05 B5:3413 [G] 68.13
BA:156 [LYS] B5:3393 [G] 2.78 B5:3413 [G] 69.86
BA:156 [LYS] B5:3394 [A] 2.99 B5:3412 [U] 69.86
BA:156 [LYS] B5:3413 [G] 4.79 B5:3393 [G] 69.86
BA:171 [GLY] B5:3415 [C] 4.4 80.82
BA:172 [GLY] B5:3415 [C] 3.56 42.4
BA:173 [GLY] B5:3415 [C] 2.92 base:BB 66.93
BA:174 [ARG] B5:2582 [C] 3.07 base:SC 70.62
BA:174 [ARG] B5:3415 [C] 2.95 base:BB, sugar:SC 70.62
BA:174 [ARG] B5:3416 [G] 2.95 B5:3392 [C] 70.62
BA:175 [ILE] B5:2582 [C] 3.82 9.92
BA:175 [ILE] B5:3415 [C] 3.22 9.92
BA:175 [ILE] B5:3416 [G] 4.48 B5:3392 [C] 9.92
BA:176 [ASP] B5:2582 [C] 4.85 52.64
BA:177 [LYS] B5:2581 [C] 4.44 B5:2585 [G] 64.58
BA:177 [LYS] B5:2582 [C] 2.59 base:BB 64.58
BA:177 [LYS] B5:3386 [G] 4.36 B5:3422 [U] 64.58
BA:178 [PRO] B5:2582 [C] 4.76 64.18
BA:178 [PRO] B5:3385 [A] 4.55 B5:3423 [G] 64.18
BA:178 [PRO] B5:3386 [G] 3.55 B5:3422 [U] 64.18
BA:179 [ILE] B5:2582 [C] 3.88 43.35
BA:179 [ILE] B5:3385 [A] 3.32 B5:3423 [G] 43.35
BA:179 [ILE] B5:3386 [G] 2.97 B5:3422 [U] 43.35
BA:180 [LEU] B5:1532 [G] 4.42 B5:3368 [C] 46.43
BA:180 [LEU] B5:3385 [A] 3.13 B5:3423 [G] sugar:BB 46.43
BA:180 [LEU] B5:3386 [G] 4.68 B5:3422 [U] 46.43
BA:181 [LYS] B5:1532 [G] 3.07 B5:3368 [C] 89.88
BA:181 [LYS] B5:1568 [A] 3.85 B5:3369 [PSU] 89.88
BA:181 [LYS] B5:3384 [A] 4.37 89.88
BA:181 [LYS] B5:3385 [A] 3.76 B5:3423 [G] 89.88
BA:182 [ALA] B5:1532 [G] 2.97 B5:3368 [C] base:BB 98.56
BA:182 [ALA] B5:1568 [A] 3.44 B5:3369 [PSU] 98.56
BA:182 [ALA] B5:3369 [PSU] 4.83 B5:1568 [A] 98.56
BA:182 [ALA] B5:3384 [A] 3.28 98.56
BA:182 [ALA] B5:3385 [A] 4.17 B5:3423 [G] 98.56
BA:183 [GLY] B5:1532 [G] 3.01 B5:3368 [C] base:BB 93.99
BA:183 [GLY] B5:1568 [A] 3.43 B5:3369 [PSU] 93.99
BA:184 [ARG] B5:1532 [G] 4.97 B5:3368 [C] 37.28
BA:184 [ARG] B5:1568 [A] 4.39 B5:3369 [PSU] 37.28
BA:184 [ARG] B5:2581 [C] 4.39 B5:2585 [G] 37.28
BA:184 [ARG] B5:2582 [C] 4.69 37.28
BA:185 [ALA] B5:3385 [A] 3.66 B5:3423 [G] 60.72
BA:186 [TYR] B5:1568 [A] 3.49 B5:3369 [PSU] 61.85
BA:186 [TYR] B5:1569 [C] 3.67 B5:1500 [G] 61.85
BA:187 [HIS] B5:1568 [A] 3.05 B5:3369 [PSU] 39.68
BA:187 [HIS] B5:2583 [U] 3.2 base/AA stacks 39.68
BA:188 [LYS] B5:2582 [C] 3.09 base:SC 8.9
BA:188 [LYS] B5:2583 [U] 4.05 8.9
BA:188 [LYS] B5:3416 [G] 4.14 B5:3392 [C] 8.9
BA:189 [TYR] B5:3417 [C] 4.98 B5:3391 [G] 46.63
BA:190 [LYS] B5:1495 [C] 3.68 B5:1574 [G] 55.39
BA:191 [ALA] B5:2583 [U] 4.31 78.99
BA:191 [ALA] B5:2584 [U] 3.82 78.99
BA:192 [LYS] B5:3410 [G] 4.36 B5:3396 [G] 68.12
BA:192 [LYS] B5:3416 [G] 4.18 B5:3392 [C] 68.12
BA:192 [LYS] B5:3417 [C] 3.12 B5:3391 [G] 68.12
BA:193 [ARG] B5:3409 [U] 3.3 B5:3397 [G] 53.76
BA:193 [ARG] B5:3410 [G] 2.71 B5:3396 [G] 53.76
BA:193 [ARG] B5:3416 [G] 4.97 B5:3392 [C] 53.76
BA:193 [ARG] B5:3417 [C] 2.88 B5:3391 [G] 53.76
BA:193 [ARG] B5:3418 [G] 3.29 B5:3390 [C] 53.76
BA:194 [ASN] B5:1493 [U] 3.23 B5:1576 [A] sugar:SC 63.14
BA:194 [ASN] B5:1494 [G] 3.6 B5:1575 [U] 63.14
BA:194 [ASN] B5:1584 [G] 3.54 B5:1587 [A] 63.14
BA:195 [CYS] B5:3418 [G] 4.06 B5:3390 [C] 10.0
BA:196 [TRP] B5:1568 [A] 3.5 B5:3369 [PSU] 66.65
BA:196 [TRP] B5:3384 [A] 3.57 66.65
BA:196 [TRP] B5:3385 [A] 2.75 B5:3423 [G] 66.65
BA:197 [PRO] B5:1568 [A] 4.44 B5:3369 [PSU] 91.33
BA:197 [PRO] B5:1585 [A] 3.36 91.33
BA:197 [PRO] B5:3383 [A] 3.2 91.33
BA:197 [PRO] B5:3384 [A] 3.89 91.33
BA:198 [ARG] B5:3383 [A] 3.55 34.87
BA:198 [ARG] B5:3384 [A] 3.17 34.87
BA:198 [ARG] B5:3419 [A] 3.06 B5:3389 [U] 34.87
BA:198 [ARG] B5:3420 [U] 2.54 B5:3388 [A] 34.87
BA:199 [VAL] B5:1585 [A] 3.43 91.17
BA:199 [VAL] B5:1586 [A] 3.33 91.17
BA:199 [VAL] B5:3382 [C] 4.15 B5:3370 [G] 91.17
BA:199 [VAL] B5:3383 [A] 3.54 91.17
BA:199 [VAL] B5:3421 [G] 4.83 B5:3387 [C] 91.17
BA:200 [ARG] B5:3382 [C] 2.78 B5:3370 [G] 90.67
BA:200 [ARG] B5:3383 [A] 2.87 90.67
BA:200 [ARG] B5:3421 [G] 3.25 B5:3387 [C] 90.67
BA:200 [ARG] B5:3422 [U] 2.91 B5:3386 [G] 90.67
BA:200 [ARG] B5:3423 [G] 3.26 B5:3385 [A] base:SC 90.67
BA:201 [GLY] B5:3420 [U] 4.47 B5:3388 [A] 92.78
BA:201 [GLY] B5:3421 [G] 2.84 B5:3387 [C] 92.78
BA:202 [VAL] B5:3421 [G] 2.85 B5:3387 [C] 81.02
BA:202 [VAL] B5:3422 [U] 3.8 B5:3386 [G] 81.02
BA:203 [ALA] B5:1586 [A] 2.97 90.7
BA:203 [ALA] B5:1587 [A] 4.08 B5:1584 [G] 90.7
BA:203 [ALA] B5:3382 [C] 3.89 B5:3370 [G] 90.7
BA:203 [ALA] B5:3383 [A] 4.46 90.7
BA:204 [MET] B5:1586 [A] 3.53 88.29
BA:205 [ASN] B5:1584 [G] 4.96 B5:1587 [A] 93.27
BA:205 [ASN] B5:1587 [A] 4.17 B5:1584 [G] 93.27
BA:205 [ASN] B5:1588 [G] 3.16 base/AA stacks 93.27
BA:206 [PRO] B5:3651 [C] 3.68 B5:4128 [G] 82.97
BA:206 [PRO] B5:3652 [PSU] 3.18 B5:4127 [A] 82.97
BA:206 [PRO] B5:4290 [A] 3.5 B5:4287 [G] 82.97
BA:206 [PRO] B5:4291 [G] 4.11 B5:4286 [C] 82.97
BA:207 [VAL] B5:1588 [G] 3.49 79.88
BA:207 [VAL] B5:1597 [A] 4.23 79.88
BA:207 [VAL] B5:3651 [C] 3.68 B5:4128 [G] 79.88
BA:207 [VAL] B5:3652 [PSU] 4.65 B5:4127 [A] 79.88
BA:208 [GLU] B5:1584 [G] 2.78 B5:1587 [A] base:SC, base:SC 80.24
BA:208 [GLU] B5:1586 [A] 3.51 80.24
BA:209 [HIS] B5:3420 [U] 2.95 B5:3388 [A] 99.0
BA:209 [HIS] B5:3421 [G] 4.98 B5:3387 [C] 99.0
BA:210 [PRO] B5:3930 [G] 4.43 B5:3659 [U] 96.04
BA:211 [PHE] B5:3420 [U] 3.54 B5:3388 [A] 85.96
BA:211 [PHE] B5:3421 [G] 3.74 B5:3387 [C] 85.96
BA:212 [GLY] B5:4290 [A] 3.93 B5:4287 [G] 96.56
BA:213 [GLY] B5:4290 [A] 3.37 B5:4287 [G] 95.16
BA:213 [GLY] B5:4291 [G] 3.97 B5:4286 [C] 95.16
BA:214 [GLY] B5:4290 [A] 3.26 B5:4287 [G] 74.78
BA:214 [GLY] B5:4291 [G] 2.89 B5:4286 [C] 74.78
BA:215 [ASN] B5:4282 [OMC] 4.71 B5:4296 [G] 67.49
BA:215 [ASN] B5:4291 [G] 3.08 B5:4286 [C] base:BB base/AA stacks 67.49
BA:215 [ASN] B5:4292 [A] 2.6 B5:4285 [U] base:SC 67.49
BA:215 [ASN] B5:4293 [C] 4.78 B5:4284 [G] 67.49
BA:216 [V5N] B5:4283 [C] 3.52 B5:4295 [G] 71.73
BA:216 [V5N] B5:4284 [G] 3.2 B5:4293 [C] base:SC 71.73
BA:216 [V5N] B5:4285 [U] 2.84 B5:4292 [A] base:SC 71.73
BA:216 [V5N] B5:4286 [C] 3.97 B5:4291 [G] 71.73
BA:216 [V5N] B5:4287 [G] 4.3 B5:4290 [A] 71.73
BA:216 [V5N] B5:4291 [G] 4.56 B5:4286 [C] 71.73
BA:216 [V5N] B5:4292 [A] 4.33 B5:4285 [U] 71.73
BA:217 [GLN] B5:3381 [A] 3.99 B5:3371 [PSU] 58.19
BA:217 [GLN] B5:3382 [C] 2.77 B5:3370 [G] 58.19
BA:217 [GLN] B5:3422 [U] 4.5 B5:3386 [G] 58.19
BA:217 [GLN] B5:4282 [OMC] 3.54 B5:4296 [G] 58.19
BA:217 [GLN] B5:4283 [C] 4.84 B5:4295 [G] 58.19
BA:218 [HIS] B5:3482 [G] 3.33 B5:3432 [C] 67.86
BA:218 [HIS] B5:4287 [G] 3.54 B5:4290 [A] 67.86
BA:218 [HIS] B5:4289 [G] 3.38 67.86
BA:218 [HIS] B5:4290 [A] 3.25 B5:4287 [G] 67.86
BA:219 [ILE] B5:3420 [U] 4.64 B5:3388 [A] 8.79
BA:219 [ILE] B5:3421 [G] 3.98 B5:3387 [C] 8.79
BA:219 [ILE] B5:3480 [A] 4.98 B5:3436 [U] 8.79
BA:219 [ILE] B5:3481 [C] 4.12 B5:3435 [G] 8.79
BA:219 [ILE] B5:3482 [G] 4.06 B5:3432 [C] 8.79
BA:220 [GLY] B5:3481 [C] 3.63 B5:3435 [G] 78.83
BA:220 [GLY] B5:3482 [G] 3.46 B5:3432 [C] 78.83
BA:220 [GLY] B5:4288 [U] 2.79 sugar:BB 78.83
BA:220 [GLY] B5:4289 [G] 3.27 78.83
BA:221 [LYS] B5:3481 [C] 3.1 B5:3435 [G] 58.35
BA:221 [LYS] B5:3653 [U] 3.5 58.35
BA:221 [LYS] B5:4288 [U] 4.77 58.35
BA:222 [PRO] B5:3436 [U] 4.15 B5:3480 [A] 51.08
BA:222 [PRO] B5:3437 [G] 3.41 B5:3477 [U] 51.08
BA:222 [PRO] B5:3480 [A] 3.75 B5:3436 [U] 51.08
BA:222 [PRO] B5:3481 [C] 3.22 B5:3435 [G] 51.08
BA:223 [SER] B5:3420 [U] 4.46 B5:3388 [A] 76.36
BA:223 [SER] B5:3480 [A] 2.38 B5:3436 [U] sugar:BB, sugar:SC 76.36
BA:223 [SER] B5:3481 [C] 4.22 B5:3435 [G] 76.36
BA:224 [THR] B5:3437 [G] 3.16 B5:3477 [U] base:SC, sugar:BB 73.01
BA:224 [THR] B5:3438 [C] 3.07 B5:3476 [OMG] 73.01
BA:224 [THR] B5:3480 [A] 3.74 B5:3436 [U] 73.01
BA:225 [ILE] B5:3438 [C] 3.78 B5:3476 [OMG] 62.74
BA:225 [ILE] B5:3439 [U] 4.57 B5:3475 [G] 62.74
BA:226 [ARG] B5:3438 [C] 3.5 B5:3476 [OMG] 74.09
BA:226 [ARG] B5:3439 [U] 3.51 B5:3475 [G] 74.09
BA:226 [ARG] B5:3927 [U] 4.19 B5:3661 [G] 74.09
BA:226 [ARG] B5:3928 [G] 3.39 B5:3660 [A] 74.09
BA:226 [ARG] B5:3929 [G] 4.18 74.09
BA:227 [ARG] B5:3391 [G] 2.74 B5:3417 [C] sugar:SC 83.48
BA:227 [ARG] B5:3392 [C] 3.7 B5:3416 [G] 83.48
BA:227 [ARG] B5:3397 [G] 3.04 B5:3409 [U] 83.48
BA:227 [ARG] B5:3398 [C] 2.92 B5:3408 [G] 83.48
BA:227 [ARG] B5:3438 [C] 4.45 B5:3476 [OMG] 83.48
BA:227 [ARG] B5:3439 [U] 3.0 B5:3475 [G] 83.48
BA:228 [ASP] B5:3661 [G] 3.3 B5:3927 [U] base:BB 53.5
BA:228 [ASP] B5:3662 [U] 3.75 B5:3926 [G] 53.5
BA:228 [ASP] B5:3926 [G] 4.56 B5:3662 [U] 53.5
BA:228 [ASP] B5:3927 [U] 3.28 B5:3661 [G] sugar:SC 53.5
BA:230 [PRO] B5:3399 [C] 4.51 B5:3407 [G] 77.7
BA:230 [PRO] B5:3660 [A] 3.38 B5:3928 [G] 77.7
BA:230 [PRO] B5:3661 [G] 4.22 B5:3927 [U] 77.7
BA:230 [PRO] B5:3928 [G] 3.45 B5:3660 [A] 77.7
BA:230 [PRO] B5:3930 [G] 3.84 B5:3659 [U] 77.7
BA:231 [ALA] B5:3399 [C] 3.59 B5:3407 [G] 86.4
BA:231 [ALA] B5:3400 [C] 3.35 B5:3406 [G] 86.4
BA:231 [ALA] B5:3930 [G] 3.32 B5:3659 [U] 86.4
BA:232 [GLY] B5:3399 [C] 4.64 B5:3407 [G] 91.77
BA:232 [GLY] B5:3930 [G] 3.41 B5:3659 [U] 91.77
BA:233 [ARG] B5:3930 [G] 3.14 B5:3659 [U] 62.41
BA:234 [LYS] B5:3398 [C] 2.91 B5:3408 [G] 94.62
BA:234 [LYS] B5:3399 [C] 3.03 B5:3407 [G] 94.62
BA:234 [LYS] B5:3419 [A] 4.33 B5:3389 [U] 94.62
BA:235 [VAL] B5:3419 [A] 3.52 B5:3389 [U] 94.92
BA:235 [VAL] B5:3420 [U] 3.33 B5:3388 [A] 94.92
BA:236 [GLY] B5:3419 [A] 2.59 B5:3389 [U] sugar:BB, sugar:BB 94.75
BA:236 [GLY] B5:3420 [U] 3.45 B5:3388 [A] 94.75
BA:237 [LEU] B5:3389 [U] 3.26 B5:3419 [A] 56.24
BA:237 [LEU] B5:3390 [C] 3.62 B5:3418 [G] 56.24
BA:237 [LEU] B5:3419 [A] 3.97 B5:3389 [U] 56.24
BA:237 [LEU] B5:3420 [U] 4.13 B5:3388 [A] 56.24
BA:237 [LEU] B5:3480 [A] 3.69 B5:3436 [U] 56.24
BA:238 [ILE] B5:3390 [C] 2.9 B5:3418 [G] sugar:BB 85.47
BA:238 [ILE] B5:3391 [G] 3.15 B5:3417 [C] sugar:BB 85.47
BA:238 [ILE] B5:3398 [C] 3.91 B5:3408 [G] 85.47
BA:238 [ILE] B5:3418 [G] 4.9 B5:3390 [C] 85.47
BA:238 [ILE] B5:3419 [A] 3.81 B5:3389 [U] 85.47
BA:239 [ALA] B5:3390 [C] 4.37 B5:3418 [G] 77.92
BA:239 [ALA] B5:3391 [G] 3.43 B5:3417 [C] 77.92
BA:239 [ALA] B5:3438 [C] 3.7 B5:3476 [OMG] 77.92
BA:239 [ALA] B5:3439 [U] 3.53 B5:3475 [G] 77.92
BA:240 [ALA] B5:3390 [C] 3.38 B5:3418 [G] 79.44
BA:240 [ALA] B5:3391 [G] 4.04 B5:3417 [C] 79.44
BA:240 [ALA] B5:3438 [C] 2.47 B5:3476 [OMG] sugar:BB 79.44
BA:240 [ALA] B5:3439 [U] 2.94 B5:3475 [G] 79.44
BA:240 [ALA] B5:3476 [OMG] 4.73 B5:3438 [C] 79.44
BA:241 [ARG] B5:3390 [C] 3.95 B5:3418 [G] 76.51
BA:241 [ARG] B5:3391 [G] 2.89 B5:3417 [C] 76.51
BA:241 [ARG] B5:3392 [C] 2.72 B5:3416 [G] 76.51
BA:241 [ARG] B5:3438 [C] 4.54 B5:3476 [OMG] 76.51
BA:241 [ARG] B5:3439 [U] 3.29 B5:3475 [G] sugar:BB 76.51
BA:241 [ARG] B5:3440 [C] 4.41 B5:3474 [G] 76.51
BA:241 [ARG] B5:3476 [OMG] 2.86 B5:3438 [C] base:BB 76.51
BA:241 [ARG] B5:3477 [U] 4.88 B5:3437 [G] 76.51
BA:242 [ARG] B5:3389 [U] 3.43 B5:3419 [A] 73.74
BA:242 [ARG] B5:3390 [C] 2.92 B5:3418 [G] 73.74
BA:242 [ARG] B5:3391 [G] 4.92 B5:3417 [C] 73.74
BA:242 [ARG] B5:3476 [OMG] 4.26 B5:3438 [C] 73.74
BA:242 [ARG] B5:3477 [U] 3.54 B5:3437 [G] 73.74
BA:242 [ARG] B5:3478 [A] 4.26 73.74
BA:243 [THR] B5:3389 [U] 4.09 B5:3419 [A] 91.08
BA:243 [THR] B5:3390 [C] 4.78 B5:3418 [G] 91.08
BA:243 [THR] B5:3433 [OMC] 4.87 91.08
BA:243 [THR] B5:3437 [G] 4.76 B5:3477 [U] 91.08
BA:243 [THR] B5:3477 [U] 2.62 B5:3437 [G] sugar:BB, sugar:BB, sugar:SC 91.08
BA:243 [THR] B5:3478 [A] 3.25 91.08
BA:243 [THR] B5:3480 [A] 3.15 B5:3436 [U] 91.08
BA:244 [GLY] B5:3389 [U] 3.13 B5:3419 [A] 89.74
BA:244 [GLY] B5:3390 [C] 4.96 B5:3418 [G] 89.74
BA:244 [GLY] B5:3477 [U] 4.74 B5:3437 [G] 89.74
BA:244 [GLY] B5:3478 [A] 3.54 89.74
BA:244 [GLY] B5:3479 [A] 3.42 89.74
BA:244 [GLY] B5:3480 [A] 3.04 B5:3436 [U] 89.74
BA:245 [ARG] B5:3388 [A] 4.9 B5:3420 [U] 82.03
BA:245 [ARG] B5:3389 [U] 4.11 B5:3419 [A] 82.03
BA:245 [ARG] B5:3429 [U] 4.28 B5:3549 [A] 82.03
BA:245 [ARG] B5:3430 [G] 2.72 B5:3484 [C] 82.03
BA:245 [ARG] B5:3478 [A] 4.63 82.03
BA:245 [ARG] B5:3479 [A] 3.09 82.03
BA:246 [LEU] B5:3389 [U] 3.54 B5:3419 [A] 50.4
BA:246 [LEU] B5:3390 [C] 3.52 B5:3418 [G] 50.4
BA:247 [ARG] B5:3430 [G] 4.23 B5:3484 [C] 58.03
BA:253 [GLN] B5:3440 [C] 4.06 B5:3474 [G] 28.43

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*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)

Properties of this interface

Interolog group ID Structure ID Structure description
 UniProt ID
 		ECOD label(s)
 		RFAM label(s)
 		Is ribosome? RCSB PDB link
group131 7O7Y_BA_B5 BA: Ribosomal protein ul2, Oryctolagus cuniculus (natural) B5: 28s rRNA, Oryctolagus cuniculus (natural) Nucleic acid-binding proteins & SH3 Eukaryotic large subunit ribosomal RNA ✔

Interologs

Total number of interologs for this interface: 9

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
6S0Z_C_A 7O7Y_BA_B5 0.58 0.88 3.94 0.25 Nucleic acid-binding proteins & SH3 compare
4Y4O_1D_1A 7O7Y_BA_B5 0.60 0.88 3.82 0.22 Nucleic acid-binding proteins & SH3 compare
7K00_c_a 7O7Y_BA_B5 0.60 0.88 3.73 0.23 Nucleic acid-binding proteins & SH3 compare
6YSI_A_1 7O7Y_BA_B5 0.60 0.89 3.76 0.21 Nucleic acid-binding proteins & SH3 compare
6AZ3_A_1,2 7O7Y_BA_B5 0.89 0.93 0.81 0.58 Nucleic acid-binding proteins & SH3 Eukaryotic large subunit ribosomal RNA compare
1VQ8_A_0 7O7Y_BA_B5 0.83 0.94 1.28 0.57 Nucleic acid-binding proteins & SH3 compare
1JJ2_A_0 7O7Y_BA_B5 0.83 0.94 1.22 0.56 Nucleic acid-binding proteins & SH3 compare
1YHQ_A_0 7O7Y_BA_B5 0.83 0.94 1.26 0.56 Nucleic acid-binding proteins & SH3 compare
6AZ3_A_3 7O7Y_BA_B5 0.84 0.96 0.46 0.36 Nucleic acid-binding proteins & SH3 compare