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All interfaces > All interologs > Interface groups > group132 > 1JJ2_J_0 vs 6AZ3_J_2

Interface analysis


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Common contacts -

1JJ2_J
1JJ2_0
6AZ3_J
6AZ3_2
Conserved?
J:68 [VAL] 0:1993 [C] J:75 [VAL] 2:541 [A] ✔
J:68 [VAL] 0:2596 [A] J:75 [VAL] 2:1369 [A] ✔
J:66 [ARG] 0:1992 [U] J:73 [LYS] 2:540 [C] ✔
J:66 [ARG] 0:1993 [C] J:73 [LYS] 2:541 [A] ✔
J:77 [ARG] 0:1743 [G] J:84 [ARG] 2:81 [G] ✔
J:77 [ARG] 0:1744 [G] J:84 [ARG] 2:82 [G] ✔
J:37 [TYR] 0:2597 [U] J:44 [TYR] 2:1370 [C] ✔
J:37 [TYR] 0:2598 [U] J:44 [TYR] 2:1371 [U] ✔
J:37 [TYR] 0:2601 [A] J:44 [TYR] 2:1374 [C] ✔
J:17 [LEU] 0:1744 [G] J:24 [VAL] 2:82 [G] ✔
J:17 [LEU] 0:1745 [G] J:24 [VAL] 2:83 [G] ✔
J:45 [PRO] 0:2583 [A] J:52 [PRO] 2:1356 [G] ✔
J:11 [GLY] 0:1743 [G] J:18 [ALA] 2:81 [G] ✔
J:11 [GLY] 0:1744 [G] J:18 [ALA] 2:82 [G] ✔
J:40 [THR] 0:2581 [U] J:47 [ARG] 2:1354 [U] ✔
J:40 [THR] 0:2582 [G] J:47 [ARG] 2:1355 [U] ✔
J:40 [THR] 0:2583 [A] J:47 [ARG] 2:1356 [G] ✔
J:13 [GLU] 0:1743 [G] J:20 [PRO] 2:81 [G] ✔
J:13 [GLU] 0:1744 [G] J:20 [PRO] 2:82 [G] ✔
J:13 [GLU] 0:2036 [C] J:20 [PRO] 2:584 [C] ✔
J:14 [LYS] 0:1747 [A] J:21 [VAL] 2:85 [A] ✔
J:14 [LYS] 0:1993 [C] J:21 [VAL] 2:541 [A] ✔
J:14 [LYS] 0:2583 [A] J:21 [VAL] 2:1356 [G] ✔
J:32 [ILE] 0:1993 [C] J:39 [ILE] 2:541 [A] ✔
J:32 [ILE] 0:2596 [A] J:39 [ILE] 2:1369 [A] ✔
J:35 [HIS] 0:2597 [U] J:42 [LYS] 2:1370 [C] ✔
J:35 [HIS] 0:2598 [U] J:42 [LYS] 2:1371 [U] ✔
J:78 [LYS] 0:1742 [A] J:85 [LYS] 2:80 [A] ✔
J:78 [LYS] 0:1743 [G] J:85 [LYS] 2:81 [G] ✔
J:36 [GLY] 0:2597 [U] J:43 [GLY] 2:1370 [C] ✔
J:36 [GLY] 0:2598 [U] J:43 [GLY] 2:1371 [U] ✔
J:30 [LYS] 0:1993 [C] J:37 [TYR] 2:541 [A] ✔
J:39 [GLY] 0:2581 [U] J:46 [GLY] 2:1354 [U] ✔
J:39 [GLY] 0:2582 [G] J:46 [GLY] 2:1355 [U] ✔
J:39 [GLY] 0:2601 [A] J:46 [GLY] 2:1374 [C] ✔
J:15 [GLY] 0:1745 [G] J:22 [GLY] 2:83 [G] ✔
J:15 [GLY] 0:1746 [A] J:22 [GLY] 2:84 [A] ✔
J:33 [SER] 0:2596 [A] J:40 [SER] 2:1369 [A] ✔
J:33 [SER] 0:2597 [U] J:40 [SER] 2:1370 [C] ✔
J:93 [ASN] 0:1743 [G] J:100 [ASN] 2:81 [G] ✔
J:93 [ASN] 0:1744 [G] J:100 [ASN] 2:82 [G] ✔
J:38 [SER] 0:2598 [U] J:45 [HIS] 2:1371 [U] ✔
J:38 [SER] 0:2599 [A] J:45 [HIS] 2:1372 [G] ✔
J:38 [SER] 0:2600 [A] J:45 [HIS] 2:1373 [A2M] ✔
J:38 [SER] 0:2601 [A] J:45 [HIS] 2:1374 [C] ✔
J:12 [LEU] 0:1743 [G] J:19 [LEU] 2:81 [G] ✔
J:12 [LEU] 0:1744 [G] J:19 [LEU] 2:82 [G] ✔
J:57 [VAL] 0:1993 [C] J:64 [VAL] 2:541 [A] ✔
J:16 [SER] 0:1744 [G] J:23 [ALA] 2:82 [G] ✔
J:16 [SER] 0:1745 [G] J:23 [ALA] 2:83 [G] ✔
J:58 [THR] 0:1993 [C] J:65 [LYS] 2:541 [A] ✔
J:56 [SER] 0:1993 [C] J:63 [SER] 2:541 [A] ✔
J:44 [HIS] 0:1747 [A] J:51 [LEU] 2:85 [A] ✔
J:44 [HIS] 0:2035 [C] J:51 [LEU] 2:583 [OMC] ✔
J:44 [HIS] 0:2036 [C] J:51 [LEU] 2:584 [C] ✔
J:44 [HIS] 0:2583 [A] J:51 [LEU] 2:1356 [G] ✔
J:44 [HIS] 0:2584 [G] J:51 [LEU] 2:1357 [G] ✔
J:42 [ASN] 0:2036 [C] J:49 [ASN] 2:584 [C] ✔
J:42 [ASN] 0:2546 [U] J:49 [ASN] 2:1319 [U] ✔
J:42 [ASN] 0:2582 [G] J:49 [ASN] 2:1355 [U] ✔
J:42 [ASN] 0:2583 [A] J:49 [ASN] 2:1356 [G] ✔
J:42 [ASN] 0:2584 [G] J:49 [ASN] 2:1357 [G] ✔
J:41 [LYS] 0:2037 [C] J:48 [LEU] 2:585 [C] ✔
J:41 [LYS] 0:2546 [U] J:48 [LEU] 2:1319 [U] ✔
J:41 [LYS] 0:2582 [G] J:48 [LEU] 2:1355 [U] ✔
J:41 [LYS] 0:2583 [A] J:48 [LEU] 2:1356 [G] ✔
J:34 [VAL] 0:2597 [U] J:41 [VAL] 2:1370 [C] ✔
J:54 [THR] 0:2596 [A] J:61 [MET] 2:1369 [A] ✔
J:54 [THR] 0:2597 [U] J:61 [MET] 2:1370 [C] ✔
J:43 [ARG] 0:2036 [C] J:50 [ARG] 2:584 [C] ✔
J:43 [ARG] 0:2037 [C] J:50 [ARG] 2:585 [C] ✔
J:43 [ARG] 0:2582 [G] J:50 [ARG] 2:1355 [U] ✔
J:43 [ARG] 0:2583 [A] J:50 [ARG] 2:1356 [G] ✔
J:40 [THR] 0:2037 [C] J:47 [ARG] 2:585 [C] ❌ 6AZ3_J_2
J:13 [GLU] 0:1747 [A] J:20 [PRO] 2:85 [A] ❌ 6AZ3_J_2
J:14 [LYS] 0:2584 [G] J:21 [VAL] 2:1357 [G] ❌ 6AZ3_J_2
J:14 [LYS] 0:2596 [A] J:21 [VAL] 2:1369 [A] ❌ 6AZ3_J_2
J:36 [GLY] 0:2599 [A] J:43 [GLY] 2:1372 [G] ❌ 6AZ3_J_2
J:30 [LYS] 0:1992 [U] J:37 [TYR] 2:540 [C] ❌ 6AZ3_J_2
J:44 [HIS] 0:1744 [G] J:51 [LEU] 2:82 [G] ❌ 6AZ3_J_2
J:42 [ASN] 0:2035 [C] J:49 [ASN] 2:583 [OMC] ❌ 6AZ3_J_2
J:41 [LYS] 0:2545 [U] J:48 [LEU] 2:1318 [OMC] ❌ 6AZ3_J_2
J:34 [VAL] 0:2598 [U] J:41 [VAL] 2:1371 [U] ❌ 6AZ3_J_2
J:15 [GLY] 0:1744 [G] J:22 [GLY] 2:82 [G] ❌ 1JJ2_J_0
J:15 [GLY] 0:1747 [A] J:22 [GLY] 2:85 [A] ❌ 1JJ2_J_0
J:37 [TYR] 0:2582 [G] J:44 [TYR] 2:1355 [U] ❌ 1JJ2_J_0
J:37 [TYR] 0:2583 [A] J:44 [TYR] 2:1356 [G] ❌ 1JJ2_J_0
J:39 [GLY] 0:2600 [A] J:46 [GLY] 2:1373 [A2M] ❌ 1JJ2_J_0
J:42 [ASN] 0:2037 [C] J:49 [ASN] 2:585 [C] ❌ 1JJ2_J_0
J:42 [ASN] 0:2545 [U] J:49 [ASN] 2:1318 [OMC] ❌ 1JJ2_J_0
J:58 [THR] 0:1992 [U] J:65 [LYS] 2:540 [C] ❌ 1JJ2_J_0
J:66 [ARG] 0:1994 [A] J:73 [LYS] 2:542 [A] ❌ 6AZ3_2:542 no longer at interface
J:41 [LYS] 0:2547 [C] J:48 [LEU] 2:1320 [C] ❌ 6AZ3_2:1320 no longer at interface
J:66 [ARG] 0:1991 [A] J:73 [LYS] 2:539 [C] ❌ 1JJ2_0:1991 no longer at interface
J:68 [VAL] 0:2595 [U] J:75 [VAL] 2:1368 [C] ❌ 1JJ2_0:2595 no longer at interface
J:70 [GLU] 0:2597 [U] J:77 [ASN] 2:1370 [C] ❌ 6AZ3_J:77 no longer at interface
J:65 [ARG] 0:1993 [C] J:72 [ARG] 2:541 [A] ❌ 1JJ2_J:65 no longer at interface
J:65 [ARG] 0:1992 [U] J:72 [ARG] 2:540 [C] ❌ 1JJ2_J:65 no longer at interface
J:67 [GLN] 0:1993 [C] J:74 [LYS] 2:541 [A] ❌ 1JJ2_J:67 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L14-related 0.83 1.04 0.50 0.93 0.81 0.91 0.92 0.88 0.70 0.38 0.31


Other pairs involving 1JJ2_J_0 or 6AZ3_J_2

Total number of entries: 20

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1JJ2_J_0 1VQ8_K_0 0.99 1.0 0.25 0.97 Ribosomal protein L14-related Archaeal large subunit ribosomal RNA compare
1JJ2_J_0 1YHQ_K_0 0.99 1.0 0.16 0.97 Ribosomal protein L14-related Archaeal large subunit ribosomal RNA compare
1JJ2_J_0 3CC2_K_0 0.99 1.0 0.1 1.0 Ribosomal protein L14-related Archaeal large subunit ribosomal RNA compare
1JJ2_J_0 4Y4O_1O_1A 0.53 0.93 2.26 0.26 Ribosomal protein L14-related compare
1YHQ_K_0 6AZ3_J_2 0.86 0.83 1.04 0.5 Ribosomal protein L14-related compare
1VQ8_K_0 6AZ3_J_2 0.86 0.83 1.08 0.5 Ribosomal protein L14-related compare
1JJ2_J_0 6AZ3_J_2 0.88 0.83 1.04 0.5 Ribosomal protein L14-related compare
4Y4O_1O_1A 6AZ3_J_2 0.70 0.83 2.11 0.24 Ribosomal protein L14-related compare
3CC2_K_0 6AZ3_J_2 0.85 0.83 1.03 0.47 Ribosomal protein L14-related compare
1JJ2_J_0 6AZ3_J_4 0.52 0.88 2.37 0.24 Ribosomal protein L14-related compare
1JJ2_J_0 6S0Z_I_A 0.60 0.93 2.3 0.31 Ribosomal protein L14-related compare
6AZ3_J_2 6S0Z_I_A 0.67 0.83 2.18 0.25 Ribosomal protein L14-related compare
1JJ2_J_0 7K00_j_a 0.55 0.91 2.09 0.26 Ribosomal protein L14-related compare
6AZ3_J_2 7K00_j_a 0.72 0.83 1.83 0.21 Ribosomal protein L14-related compare
1JJ2_J_0 7O7Y_BV_B5 0.73 0.94 1.74 0.39 Ribosomal protein L14-related compare
6AZ3_J_2 7O7Y_BV_B5 0.93 0.91 0.71 0.72 Ribosomal protein L14-related Eukaryotic large subunit ribosomal RNA compare
1JJ2_J_0 7OF0_L_A 0.53 0.95 2.54 0.12 Ribosomal protein L14-related compare
6AZ3_J_2 7OF0_L_A 0.66 0.53 2.07 0.09 Ribosomal protein L14-related compare
1JJ2_J_0 7RYG_J_A 0.60 0.92 2.21 0.27 Ribosomal protein L14-related compare
6AZ3_J_2 7RYG_J_A 0.66 0.82 2.44 0.21 Ribosomal protein L14-related compare