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All interfaces > All interologs > Interface groups > group132 > 1JJ2_J_0 vs 7K00_j_a

Interface analysis


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Licorice
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Licorice
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show interface as licorice

Common contacts -

1JJ2_J
1JJ2_0
7K00_j
7K00_a
Conserved?
J:68 [VAL] 0:1993 [C] j:57 [VAL] a:1952 [A] ✔
J:68 [VAL] 0:2596 [A] j:57 [VAL] a:2561 [U] ✔
J:66 [ARG] 0:1993 [C] j:55 [GLY] a:1952 [A] ✔
J:70 [GLU] 0:2597 [U] j:59 [LYS] a:2562 [U] ✔
J:77 [ARG] 0:1743 [G] j:66 [LYS] a:1665 [A] ✔
J:77 [ARG] 0:1744 [G] j:66 [LYS] a:1666 [G] ✔
J:37 [TYR] 0:2597 [U] j:27 [GLY] a:2562 [U] ✔
J:37 [TYR] 0:2598 [U] j:27 [GLY] a:2563 [U] ✔
J:37 [TYR] 0:2711 [U] j:27 [GLY] a:2674 [G] ✔
J:85 [GLY] 0:2720 [C] j:74 [GLY] a:2683 [C] ✔
J:17 [LEU] 0:1744 [G] j:7 [MET] a:1666 [G] ✔
J:17 [LEU] 0:1745 [G] j:7 [MET] a:1667 [G] ✔
J:11 [GLY] 0:1743 [G] j:1 [MET] a:1665 [A] ✔
J:11 [GLY] 0:1744 [G] j:1 [MET] a:1666 [G] ✔
J:81 [ARG] 0:2720 [C] j:70 [ARG] a:2683 [C] ✔
J:81 [ARG] 0:2763 [G] j:70 [ARG] a:2727 [A] ✔
J:81 [ARG] 0:2764 [C] j:70 [ARG] a:2728 [U] ✔
J:13 [GLU] 0:1743 [G] j:3 [GLN] a:1665 [A] ✔
J:13 [GLU] 0:1744 [G] j:3 [GLN] a:1666 [G] ✔
J:13 [GLU] 0:1747 [A] j:3 [GLN] a:1669 [A] ✔
J:13 [GLU] 0:2036 [C] j:3 [GLN] a:1995 [U] ✔
J:87 [ARG] 0:2721 [U] j:76 [VAL] a:2684 [U] ✔
J:14 [LYS] 0:1747 [A] j:4 [GLU] a:1669 [A] ✔
J:14 [LYS] 0:2583 [A] j:4 [GLU] a:2548 [U] ✔
J:14 [LYS] 0:2584 [G] j:4 [GLU] a:2549 [G] ✔
J:32 [ILE] 0:1993 [C] j:22 [ILE] a:1952 [A] ✔
J:32 [ILE] 0:2596 [A] j:22 [ILE] a:2561 [U] ✔
J:35 [HIS] 0:2597 [U] j:25 [LEU] a:2562 [U] ✔
J:35 [HIS] 0:2598 [U] j:25 [LEU] a:2563 [U] ✔
J:78 [LYS] 0:1742 [A] j:67 [LYS] a:1664 [A] ✔
J:78 [LYS] 0:1743 [G] j:67 [LYS] a:1665 [A] ✔
J:78 [LYS] 0:2762 [C] j:67 [LYS] a:2726 [A] ✔
J:36 [GLY] 0:2597 [U] j:26 [GLY] a:2562 [U] ✔
J:36 [GLY] 0:2598 [U] j:26 [GLY] a:2563 [U] ✔
J:30 [LYS] 0:1993 [C] j:20 [MET] a:1952 [A] ✔
J:39 [GLY] 0:2581 [U] j:29 [HIS] a:2546 [U] ✔
J:39 [GLY] 0:2582 [G] j:29 [HIS] a:2547 [A] ✔
J:39 [GLY] 0:2601 [A] j:29 [HIS] a:2566 [A] ✔
J:39 [GLY] 0:2711 [U] j:29 [HIS] a:2674 [G] ✔
J:39 [GLY] 0:2712 [G] j:29 [HIS] a:2675 [A] ✔
J:15 [GLY] 0:1745 [G] j:5 [GLN] a:1667 [G] ✔
J:15 [GLY] 0:1746 [A] j:5 [GLN] a:1668 [A] ✔
J:33 [SER] 0:2596 [A] j:23 [LYS] a:2561 [U] ✔
J:33 [SER] 0:2597 [U] j:23 [LYS] a:2562 [U] ✔
J:93 [ASN] 0:1743 [G] j:82 [ASN] a:1665 [A] ✔
J:93 [ASN] 0:1744 [G] j:82 [ASN] a:1666 [G] ✔
J:38 [SER] 0:2598 [U] j:28 [SER] a:2563 [U] ✔
J:38 [SER] 0:2600 [A] j:28 [SER] a:2565 [A] ✔
J:38 [SER] 0:2601 [A] j:28 [SER] a:2566 [A] ✔
J:38 [SER] 0:2711 [U] j:28 [SER] a:2674 [G] ✔
J:38 [SER] 0:2712 [G] j:28 [SER] a:2675 [A] ✔
J:46 [LYS] 0:2712 [G] j:32 [TYR] a:2675 [A] ✔
J:12 [LEU] 0:1743 [G] j:2 [ILE] a:1665 [A] ✔
J:57 [VAL] 0:1993 [C] j:43 [ILE] a:1952 [A] ✔
J:16 [SER] 0:1744 [G] j:6 [THR] a:1666 [G] ✔
J:16 [SER] 0:1745 [G] j:6 [THR] a:1667 [G] ✔
J:58 [THR] 0:1993 [C] j:44 [LYS] a:1952 [A] ✔
J:56 [SER] 0:1993 [C] j:42 [THR] a:1952 [A] ✔
J:34 [VAL] 0:2597 [U] j:24 [VAL] a:2562 [U] ✔
J:54 [THR] 0:2596 [A] j:40 [LYS] a:2561 [U] ✔
J:54 [THR] 0:2597 [U] j:40 [LYS] a:2562 [U] ✔
J:66 [ARG] 0:1992 [U] j:55 [GLY] a:1951 [U] ❌ 7K00_j_a
J:37 [TYR] 0:2601 [A] j:27 [GLY] a:2566 [A] ❌ 7K00_j_a
J:37 [TYR] 0:2712 [G] j:27 [GLY] a:2675 [A] ❌ 7K00_j_a
J:45 [PRO] 0:2583 [A] j:31 [ARG] a:2548 [U] ❌ 7K00_j_a
J:87 [ARG] 0:2720 [C] j:76 [VAL] a:2683 [C] ❌ 7K00_j_a
J:87 [ARG] 0:2763 [G] j:76 [VAL] a:2727 [A] ❌ 7K00_j_a
J:87 [ARG] 0:2764 [C] j:76 [VAL] a:2728 [U] ❌ 7K00_j_a
J:14 [LYS] 0:1993 [C] j:4 [GLU] a:1952 [A] ❌ 7K00_j_a
J:14 [LYS] 0:2596 [A] j:4 [GLU] a:2561 [U] ❌ 7K00_j_a
J:78 [LYS] 0:2722 [G] j:67 [LYS] a:2685 [G] ❌ 7K00_j_a
J:30 [LYS] 0:1992 [U] j:20 [MET] a:1951 [U] ❌ 7K00_j_a
J:46 [LYS] 0:2711 [U] j:32 [TYR] a:2674 [G] ❌ 7K00_j_a
J:12 [LEU] 0:1744 [G] j:2 [ILE] a:1666 [G] ❌ 7K00_j_a
J:44 [HIS] 0:1744 [G] j:30 [ARG] a:1666 [G] ❌ 7K00_j_a
J:44 [HIS] 0:1747 [A] j:30 [ARG] a:1669 [A] ❌ 7K00_j_a
J:44 [HIS] 0:2036 [C] j:30 [ARG] a:1995 [U] ❌ 7K00_j_a
J:44 [HIS] 0:2583 [A] j:30 [ARG] a:2548 [U] ❌ 7K00_j_a
J:44 [HIS] 0:2584 [G] j:30 [ARG] a:2549 [G] ❌ 7K00_j_a
J:34 [VAL] 0:2598 [U] j:24 [VAL] a:2563 [U] ❌ 7K00_j_a
J:11 [GLY] 0:2762 [C] j:1 [MET] a:2726 [A] ❌ 1JJ2_J_0
J:11 [GLY] 0:1742 [A] j:1 [MET] a:1664 [A] ❌ 1JJ2_J_0
J:11 [GLY] 0:2037 [C] j:1 [MET] a:1996 [C] ❌ 1JJ2_J_0
J:33 [SER] 0:2583 [A] j:23 [LYS] a:2548 [U] ❌ 1JJ2_J_0
J:33 [SER] 0:2582 [G] j:23 [LYS] a:2547 [A] ❌ 1JJ2_J_0
J:36 [GLY] 0:2711 [U] j:26 [GLY] a:2674 [G] ❌ 1JJ2_J_0
J:39 [GLY] 0:2583 [A] j:29 [HIS] a:2548 [U] ❌ 1JJ2_J_0
J:44 [HIS] 0:2710 [U] j:30 [ARG] a:2673 [G] ❌ 1JJ2_J_0
J:44 [HIS] 0:2712 [G] j:30 [ARG] a:2675 [A] ❌ 1JJ2_J_0
J:44 [HIS] 0:2711 [U] j:30 [ARG] a:2674 [G] ❌ 1JJ2_J_0
J:45 [PRO] 0:2711 [U] j:31 [ARG] a:2674 [G] ❌ 1JJ2_J_0
J:45 [PRO] 0:2713 [G] j:31 [ARG] a:2676 [C] ❌ 1JJ2_J_0
J:45 [PRO] 0:2036 [C] j:31 [ARG] a:1995 [U] ❌ 1JJ2_J_0
J:45 [PRO] 0:2037 [C] j:31 [ARG] a:1996 [C] ❌ 1JJ2_J_0
J:45 [PRO] 0:2712 [G] j:31 [ARG] a:2675 [A] ❌ 1JJ2_J_0
J:46 [LYS] 0:2762 [C] j:32 [TYR] a:2726 [A] ❌ 1JJ2_J_0
J:46 [LYS] 0:1743 [G] j:32 [TYR] a:1665 [A] ❌ 1JJ2_J_0
J:46 [LYS] 0:2036 [C] j:32 [TYR] a:1995 [U] ❌ 1JJ2_J_0
J:46 [LYS] 0:2037 [C] j:32 [TYR] a:1996 [C] ❌ 1JJ2_J_0
J:14 [LYS] 0:1744 [G] j:4 [GLU] a:1666 [G] ❌ 1JJ2_J_0
J:58 [THR] 0:1992 [U] j:44 [LYS] a:1951 [U] ❌ 1JJ2_J_0
J:15 [GLY] 0:2584 [G] j:5 [GLN] a:2549 [G] ❌ 1JJ2_J_0
J:15 [GLY] 0:1744 [G] j:5 [GLN] a:1666 [G] ❌ 1JJ2_J_0
J:15 [GLY] 0:1993 [C] j:5 [GLN] a:1952 [A] ❌ 1JJ2_J_0
J:15 [GLY] 0:1747 [A] j:5 [GLN] a:1669 [A] ❌ 1JJ2_J_0
J:78 [LYS] 0:2763 [G] j:67 [LYS] a:2727 [A] ❌ 1JJ2_J_0
J:81 [ARG] 0:2721 [U] j:70 [ARG] a:2684 [U] ❌ 1JJ2_J_0
J:85 [GLY] 0:2721 [U] j:74 [GLY] a:2684 [U] ❌ 1JJ2_J_0
J:87 [ARG] 0:2722 [G] j:76 [VAL] a:2685 [G] ❌ 1JJ2_J_0
J:66 [ARG] 0:1994 [A] j:55 [GLY] a:1953 [A] ❌ 7K00_a:1953 no longer at interface
J:81 [ARG] 0:2765 [C] j:70 [ARG] a:2729 [G] ❌ 7K00_a:2729 no longer at interface
J:36 [GLY] 0:2599 [A] j:26 [GLY] a:2564 [A] ❌ 7K00_a:2564 no longer at interface
J:120 [ARG] 0:2709 [G] j:111 [LYS] a:2672 [U] ❌ 7K00_j:111, 7K00_a:2672 no longer at interface
J:38 [SER] 0:2599 [A] j:28 [SER] a:2564 [A] ❌ 7K00_a:2564 no longer at interface
J:44 [HIS] 0:2035 [C] j:30 [ARG] a:1994 [C] ❌ 7K00_a:1994 no longer at interface
J:33 [SER] 0:2595 [U] j:23 [LYS] a:2560 [A] ❌ 1JJ2_0:2595 no longer at interface
J:79 [PRO] 0:2721 [U] j:68 [GLY] a:2684 [U] ❌ 7K00_j:68 no longer at interface
J:65 [ARG] 0:1992 [U] j:54 [LYS] a:1951 [U] ❌ 1JJ2_J:65 no longer at interface
J:89 [LYS] 0:2721 [U] j:78 [ARG] a:2684 [U] ❌ 1JJ2_J:89 no longer at interface
J:89 [LYS] 0:2722 [G] j:78 [ARG] a:2685 [G] ❌ 1JJ2_J:89 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L14-related 0.91 2.09 0.26 0.87 0.9 0.91 0.97 0.55 0.53 0.24 0.19


Other pairs involving 1JJ2_J_0 or 7K00_j_a

Total number of entries: 17

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1YHQ_K_0 7K00_j_a 0.60 0.91 2.13 0.26 Ribosomal protein L14-related compare
1VQ8_K_0 7K00_j_a 0.61 0.91 2.13 0.26 Ribosomal protein L14-related compare
1JJ2_J_0 1VQ8_K_0 0.99 1.0 0.25 0.97 Ribosomal protein L14-related Archaeal large subunit ribosomal RNA compare
1JJ2_J_0 1YHQ_K_0 0.99 1.0 0.16 0.97 Ribosomal protein L14-related Archaeal large subunit ribosomal RNA compare
1JJ2_J_0 3CC2_K_0 0.99 1.0 0.1 1.0 Ribosomal protein L14-related Archaeal large subunit ribosomal RNA compare
1JJ2_J_0 4Y4O_1O_1A 0.53 0.93 2.26 0.26 Ribosomal protein L14-related compare
1JJ2_J_0 7K00_j_a 0.55 0.91 2.09 0.26 Ribosomal protein L14-related compare
1JJ2_J_0 7OF0_L_A 0.53 0.95 2.54 0.12 Ribosomal protein L14-related compare
1JJ2_J_0 7RYG_J_A 0.60 0.92 2.21 0.27 Ribosomal protein L14-related compare
1JJ2_J_0 6AZ3_J_2 0.88 0.83 1.04 0.5 Ribosomal protein L14-related compare
1JJ2_J_0 7O7Y_BV_B5 0.73 0.94 1.74 0.39 Ribosomal protein L14-related compare
1JJ2_J_0 6S0Z_I_A 0.60 0.93 2.3 0.31 Ribosomal protein L14-related compare
1JJ2_J_0 6AZ3_J_4 0.52 0.88 2.37 0.24 Ribosomal protein L14-related compare
4Y4O_1O_1A 7K00_j_a 0.87 0.97 0.94 0.62 Ribosomal protein L14-related Bacterial large subunit ribosomal RNA compare
3CC2_K_0 7K00_j_a 0.55 0.91 2.12 0.26 Ribosomal protein L14-related compare
6S0Z_I_A 7K00_j_a 0.82 0.97 1.2 0.66 Ribosomal protein L14-related Bacterial large subunit ribosomal RNA compare
6AZ3_J_2 7K00_j_a 0.72 0.83 1.83 0.21 Ribosomal protein L14-related compare