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All interfaces > All interologs > Interface groups > group132 > 1VQ8_K_0 vs 6S0Z_I_A

Interface analysis


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Common contacts -

1VQ8_K
1VQ8_0
6S0Z_I
6S0Z_A
Conserved?
K:68 [VAL] 0:1993 [C] I:57 [VAL] A:1979 [A] ✔
K:68 [VAL] 0:2596 [A] I:57 [VAL] A:2588 [A] ✔
K:66 [ARG] 0:1993 [C] I:55 [GLY] A:1979 [A] ✔
K:77 [ARG] 0:1743 [G] I:66 [LYS] A:1709 [A] ✔
K:77 [ARG] 0:1744 [G] I:66 [LYS] A:1710 [G] ✔
K:37 [TYR] 0:2597 [U] I:27 [GLY] A:2589 [U] ✔
K:37 [TYR] 0:2598 [U] I:27 [GLY] A:2590 [U] ✔
K:37 [TYR] 0:2711 [U] I:27 [GLY] A:2701 [G] ✔
K:85 [GLY] 0:2720 [C] I:74 [GLY] A:2710 [C] ✔
K:17 [LEU] 0:1744 [G] I:7 [ARG] A:1710 [G] ✔
K:17 [LEU] 0:1745 [G] I:7 [ARG] A:1711 [G] ✔
K:11 [GLY] 0:1743 [G] I:1 [MET] A:1709 [A] ✔
K:11 [GLY] 0:1744 [G] I:1 [MET] A:1710 [G] ✔
K:81 [ARG] 0:2720 [C] I:70 [ARG] A:2710 [C] ✔
K:81 [ARG] 0:2763 [G] I:70 [ARG] A:2754 [G] ✔
K:81 [ARG] 0:2764 [C] I:70 [ARG] A:2755 [U] ✔
K:81 [ARG] 0:2765 [C] I:70 [ARG] A:2756 [G] ✔
K:13 [GLU] 0:1743 [G] I:3 [GLN] A:1709 [A] ✔
K:13 [GLU] 0:1744 [G] I:3 [GLN] A:1710 [G] ✔
K:13 [GLU] 0:1747 [A] I:3 [GLN] A:1713 [A] ✔
K:13 [GLU] 0:2036 [C] I:3 [GLN] A:2022 [U] ✔
K:87 [ARG] 0:2720 [C] I:76 [TYR] A:2710 [C] ✔
K:87 [ARG] 0:2721 [U] I:76 [TYR] A:2711 [U] ✔
K:87 [ARG] 0:2763 [G] I:76 [TYR] A:2754 [G] ✔
K:14 [LYS] 0:1747 [A] I:4 [GLN] A:1713 [A] ✔
K:14 [LYS] 0:1993 [C] I:4 [GLN] A:1979 [A] ✔
K:14 [LYS] 0:2583 [A] I:4 [GLN] A:2575 [G] ✔
K:14 [LYS] 0:2584 [G] I:4 [GLN] A:2576 [G] ✔
K:32 [ILE] 0:1993 [C] I:22 [ILE] A:1979 [A] ✔
K:32 [ILE] 0:2596 [A] I:22 [ILE] A:2588 [A] ✔
K:35 [HIS] 0:2597 [U] I:25 [LEU] A:2589 [U] ✔
K:35 [HIS] 0:2598 [U] I:25 [LEU] A:2590 [U] ✔
K:78 [LYS] 0:1743 [G] I:67 [SER] A:1709 [A] ✔
K:36 [GLY] 0:2597 [U] I:26 [GLY] A:2589 [U] ✔
K:36 [GLY] 0:2598 [U] I:26 [GLY] A:2590 [U] ✔
K:36 [GLY] 0:2599 [A] I:26 [GLY] A:2591 [A] ✔
K:30 [LYS] 0:1993 [C] I:20 [LEU] A:1979 [A] ✔
K:39 [GLY] 0:2582 [G] I:29 [GLY] A:2574 [U] ✔
K:39 [GLY] 0:2711 [U] I:29 [GLY] A:2701 [G] ✔
K:39 [GLY] 0:2712 [G] I:29 [GLY] A:2702 [A] ✔
K:15 [GLY] 0:1745 [G] I:5 [GLU] A:1711 [G] ✔
K:15 [GLY] 0:1746 [A] I:5 [GLU] A:1712 [A] ✔
K:33 [SER] 0:2596 [A] I:23 [LYS] A:2588 [A] ✔
K:33 [SER] 0:2597 [U] I:23 [LYS] A:2589 [U] ✔
K:93 [ASN] 0:1743 [G] I:82 [ASN] A:1709 [A] ✔
K:93 [ASN] 0:1744 [G] I:82 [ASN] A:1710 [G] ✔
K:38 [SER] 0:2598 [U] I:28 [SER] A:2590 [U] ✔
K:38 [SER] 0:2600 [A] I:28 [SER] A:2592 [A] ✔
K:38 [SER] 0:2601 [A] I:28 [SER] A:2593 [A] ✔
K:38 [SER] 0:2711 [U] I:28 [SER] A:2701 [G] ✔
K:38 [SER] 0:2712 [G] I:28 [SER] A:2702 [A] ✔
K:16 [SER] 0:1744 [G] I:6 [THR] A:1710 [G] ✔
K:16 [SER] 0:1745 [G] I:6 [THR] A:1711 [G] ✔
K:58 [THR] 0:1993 [C] I:44 [LYS] A:1979 [A] ✔
K:56 [SER] 0:1993 [C] I:42 [THR] A:1979 [A] ✔
K:34 [VAL] 0:2597 [U] I:24 [VAL] A:2589 [U] ✔
K:54 [THR] 0:2596 [A] I:40 [VAL] A:2588 [A] ✔
K:54 [THR] 0:2597 [U] I:40 [VAL] A:2589 [U] ✔
K:66 [ARG] 0:1992 [U] I:55 [GLY] A:1978 [U] ❌ 6S0Z_I_A
K:37 [TYR] 0:2601 [A] I:27 [GLY] A:2593 [A] ❌ 6S0Z_I_A
K:37 [TYR] 0:2712 [G] I:27 [GLY] A:2702 [A] ❌ 6S0Z_I_A
K:45 [PRO] 0:2583 [A] I:31 [LYS] A:2575 [G] ❌ 6S0Z_I_A
K:87 [ARG] 0:2764 [C] I:76 [TYR] A:2755 [U] ❌ 6S0Z_I_A
K:14 [LYS] 0:2596 [A] I:4 [GLN] A:2588 [A] ❌ 6S0Z_I_A
K:78 [LYS] 0:1742 [A] I:67 [SER] A:1708 [A] ❌ 6S0Z_I_A
K:78 [LYS] 0:2722 [G] I:67 [SER] A:2712 [G] ❌ 6S0Z_I_A
K:78 [LYS] 0:2762 [C] I:67 [SER] A:2753 [U] ❌ 6S0Z_I_A
K:30 [LYS] 0:1992 [U] I:20 [LEU] A:1978 [U] ❌ 6S0Z_I_A
K:39 [GLY] 0:2601 [A] I:29 [GLY] A:2593 [A] ❌ 6S0Z_I_A
K:44 [LEU] 0:1744 [G] I:30 [ARG] A:1710 [G] ❌ 6S0Z_I_A
K:44 [LEU] 0:1747 [A] I:30 [ARG] A:1713 [A] ❌ 6S0Z_I_A
K:44 [LEU] 0:2036 [C] I:30 [ARG] A:2022 [U] ❌ 6S0Z_I_A
K:44 [LEU] 0:2583 [A] I:30 [ARG] A:2575 [G] ❌ 6S0Z_I_A
K:44 [LEU] 0:2584 [G] I:30 [ARG] A:2576 [G] ❌ 6S0Z_I_A
K:34 [VAL] 0:2598 [U] I:24 [VAL] A:2590 [U] ❌ 6S0Z_I_A
K:11 [GLY] 0:1742 [A] I:1 [MET] A:1708 [A] ❌ 1VQ8_K_0
K:11 [GLY] 0:2037 [C] I:1 [MET] A:2023 [C] ❌ 1VQ8_K_0
K:11 [GLY] 0:2762 [C] I:1 [MET] A:2753 [U] ❌ 1VQ8_K_0
K:33 [SER] 0:2582 [G] I:23 [LYS] A:2574 [U] ❌ 1VQ8_K_0
K:33 [SER] 0:2583 [A] I:23 [LYS] A:2575 [G] ❌ 1VQ8_K_0
K:38 [SER] 0:2582 [G] I:28 [SER] A:2574 [U] ❌ 1VQ8_K_0
K:44 [LEU] 0:2712 [G] I:30 [ARG] A:2702 [A] ❌ 1VQ8_K_0
K:44 [LEU] 0:2711 [U] I:30 [ARG] A:2701 [G] ❌ 1VQ8_K_0
K:45 [PRO] 0:2037 [C] I:31 [LYS] A:2023 [C] ❌ 1VQ8_K_0
K:45 [PRO] 0:2036 [C] I:31 [LYS] A:2022 [U] ❌ 1VQ8_K_0
K:45 [PRO] 0:2712 [G] I:31 [LYS] A:2702 [A] ❌ 1VQ8_K_0
K:14 [LYS] 0:1744 [G] I:4 [GLN] A:1710 [G] ❌ 1VQ8_K_0
K:58 [THR] 0:1992 [U] I:44 [LYS] A:1978 [U] ❌ 1VQ8_K_0
K:15 [GLY] 0:1744 [G] I:5 [GLU] A:1710 [G] ❌ 1VQ8_K_0
K:15 [GLY] 0:2584 [G] I:5 [GLU] A:2576 [G] ❌ 1VQ8_K_0
K:15 [GLY] 0:1747 [A] I:5 [GLU] A:1713 [A] ❌ 1VQ8_K_0
K:15 [GLY] 0:1993 [C] I:5 [GLU] A:1979 [A] ❌ 1VQ8_K_0
K:66 [ARG] 0:1994 [A] I:55 [GLY] A:1980 [A] ❌ 6S0Z_A:1980 no longer at interface
K:36 [GLY] 0:2685 [C] I:26 [GLY] A:2675 [G] ❌ 6S0Z_A:2675 no longer at interface
K:39 [GLY] 0:2581 [U] I:29 [GLY] A:2573 [U] ❌ 6S0Z_A:2573 no longer at interface
K:44 [LEU] 0:2035 [C] I:30 [ARG] A:2021 [C] ❌ 6S0Z_A:2021 no longer at interface
K:17 [LEU] 0:2029 [C] I:7 [ARG] A:2015 [C] ❌ 1VQ8_0:2029 no longer at interface
K:79 [PRO] 0:2721 [U] I:68 [GLY] A:2711 [U] ❌ 6S0Z_I:68 no longer at interface
K:46 [LYS] 0:2711 [U] I:32 [THR] A:2701 [G] ❌ 6S0Z_I:32 no longer at interface
K:46 [LYS] 0:2712 [G] I:32 [THR] A:2702 [A] ❌ 6S0Z_I:32 no longer at interface
K:12 [LEU] 0:1743 [G] I:2 [ILE] A:1709 [A] ❌ 6S0Z_I:2 no longer at interface
K:12 [LEU] 0:1744 [G] I:2 [ILE] A:1710 [G] ❌ 6S0Z_I:2 no longer at interface
K:57 [VAL] 0:1993 [C] I:43 [VAL] A:1979 [A] ❌ 1VQ8_K:57 no longer at interface
K:65 [ARG] 0:1992 [U] I:54 [LYS] A:1978 [U] ❌ 1VQ8_K:65 no longer at interface
K:70 [GLU] 0:2597 [U] I:59 [LYS] A:2589 [U] ❌ 1VQ8_K:70 no longer at interface
K:89 [LYS] 0:2722 [G] I:78 [LYS] A:2712 [G] ❌ 1VQ8_K:89 no longer at interface
K:89 [LYS] 0:2721 [U] I:78 [LYS] A:2711 [U] ❌ 1VQ8_K:89 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L14-related 0.93 2.29 0.28 0.89 0.93 0.88 0.97 0.62 0.58 0.25 0.31


Other pairs involving 1VQ8_K_0 or 6S0Z_I_A

Total number of entries: 20

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1YHQ_K_0 6S0Z_I_A 0.62 0.93 2.34 0.28 Ribosomal protein L14-related compare
1VQ8_K_0 1YHQ_K_0 0.99 1.0 0.18 0.97 Ribosomal protein L14-related Archaeal large subunit ribosomal RNA compare
1VQ8_K_0 6AZ3_J_2 0.86 0.83 1.08 0.5 Ribosomal protein L14-related compare
1VQ8_K_0 4Y4O_1O_1A 0.55 0.93 2.28 0.24 Ribosomal protein L14-related compare
1VQ8_K_0 7K00_j_a 0.61 0.91 2.13 0.26 Ribosomal protein L14-related compare
1VQ8_K_0 7RYG_J_A 0.60 0.92 2.17 0.24 Ribosomal protein L14-related compare
1VQ8_K_0 6AZ3_J_4 0.53 0.88 2.31 0.24 Ribosomal protein L14-related compare
1VQ8_K_0 7OF0_L_A 0.52 0.95 2.51 0.12 Ribosomal protein L14-related compare
1VQ8_K_0 7O7Y_BV_B5 0.72 0.94 1.78 0.44 Ribosomal protein L14-related compare
1VQ8_K_0 3CC2_K_0 0.99 1.0 0.24 0.97 Ribosomal protein L14-related Archaeal large subunit ribosomal RNA compare
1VQ8_K_0 6S0Z_I_A 0.62 0.93 2.29 0.28 Ribosomal protein L14-related compare
1JJ2_J_0 1VQ8_K_0 0.99 1.0 0.25 0.97 Ribosomal protein L14-related Archaeal large subunit ribosomal RNA compare
1JJ2_J_0 6S0Z_I_A 0.60 0.93 2.3 0.31 Ribosomal protein L14-related compare
4Y4O_1O_1A 6S0Z_I_A 0.77 0.97 1.1 0.56 Ribosomal protein L14-related Bacterial large subunit ribosomal RNA compare
3CC2_K_0 6S0Z_I_A 0.60 0.93 2.37 0.28 Ribosomal protein L14-related compare
6S0Z_I_A 7RYG_J_A 0.82 0.98 0.87 0.69 Ribosomal protein L14-related Bacterial large subunit ribosomal RNA compare
6S0Z_I_A 7O7Y_BV_B5 0.63 0.89 2.29 0.31 Ribosomal protein L14-related compare
6S0Z_I_A 7OF0_L_A 0.57 0.96 2.06 0.22 Ribosomal protein L14-related Bacterial large subunit ribosomal RNA compare
6S0Z_I_A 7K00_j_a 0.82 0.97 1.2 0.66 Ribosomal protein L14-related Bacterial large subunit ribosomal RNA compare
6AZ3_J_2 6S0Z_I_A 0.67 0.83 2.18 0.25 Ribosomal protein L14-related compare