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All interfaces > All interologs > Interface groups > group132 > 3CC2_K_0

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Licorice
Surface

RNA

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Licorice
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Chain
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Chainbow
Hydrophobicity
Electrostatics (surface only)
Conservation*

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Rim - Core

Contacts -

3CC2_K
3CC2_0
Distance
Base Pair
Hbond nuc:res
Base Stacking
Residue conservation
K:1 [MET] 0:2686 [C] 2.63 0:2708 [G] base:BB, sugar:BB 67.17
K:1 [MET] 0:2687 [G] 3.12 0:2707 [C] 67.17
K:1 [MET] 0:2708 [G] 2.72 0:2686 [C] base:BB 67.17
K:1 [MET] 0:2709 [G] 4.4 0:2685 [C] 67.17
K:2 [GLU] 0:2687 [G] 3.86 0:2707 [C] 45.01
K:2 [GLU] 0:2708 [G] 4.65 0:2686 [C] 45.01
K:2 [GLU] 0:2709 [G] 4.69 0:2685 [C] 45.01
K:3 [ALA] 0:2708 [G] 3.35 0:2686 [C] 34.75
K:3 [ALA] 0:2709 [G] 3.42 0:2685 [C] 34.75
K:4 [LEU] 0:2709 [G] 4.87 0:2685 [C] 1.65
K:7 [ASP] 0:2710 [U] 4.02 0:2684 [A] 17.73
K:7 [ASP] 0:2764 [C] 3.63 0:2716 [G] 17.73
K:8 [VAL] 0:2763 [G] 4.5 0:2717 [C] 50.01
K:9 [THR] 0:2762 [C] 3.46 70.06
K:9 [THR] 0:2763 [G] 2.59 0:2717 [C] 70.06
K:10 [GLN] 0:2710 [U] 4.92 0:2684 [A] 42.22
K:10 [GLN] 0:2711 [U] 3.03 0:2683 [G] 42.22
K:11 [GLY] 0:1743 [G] 2.57 0:2036 [C] sugar:BB 75.79
K:11 [GLY] 0:1744 [G] 3.24 0:2035 [C] sugar:BB 75.79
K:12 [LEU] 0:1743 [G] 4.54 0:2036 [C] 76.22
K:12 [LEU] 0:1744 [G] 4.21 0:2035 [C] 76.22
K:13 [GLU] 0:1743 [G] 4.09 0:2036 [C] 38.2
K:13 [GLU] 0:1744 [G] 3.14 0:2035 [C] base:SC 38.2
K:13 [GLU] 0:1747 [A] 3.54 0:2034 [U] 38.2
K:13 [GLU] 0:2036 [C] 2.75 0:1743 [G] 38.2
K:14 [LYS] 0:1747 [A] 4.53 0:2034 [U] 31.03
K:14 [LYS] 0:1993 [C] 4.47 31.03
K:14 [LYS] 0:2583 [A] 3.64 0:2595 [U] 31.03
K:14 [LYS] 0:2584 [G] 4.31 0:2594 [C] 31.03
K:14 [LYS] 0:2596 [A] 3.77 0:2582 [G] 31.03
K:15 [GLY] 0:1745 [G] 4.57 37.39
K:15 [GLY] 0:1746 [A] 4.67 0:2032 [U] 37.39
K:16 [SER] 0:1744 [G] 2.65 0:2035 [C] sugar:SC 78.85
K:16 [SER] 0:1745 [G] 3.34 78.85
K:17 [LEU] 0:1744 [G] 4.55 0:2035 [C] 0.0
K:17 [LEU] 0:1745 [G] 2.82 0.0
K:30 [LYS] 0:1992 [U] 3.3 35.37
K:30 [LYS] 0:1993 [C] 2.75 35.37
K:32 [ILE] 0:1993 [C] 3.37 88.26
K:32 [ILE] 0:2596 [A] 3.34 0:2582 [G] 88.26
K:33 [SER] 0:2596 [A] 2.6 0:2582 [G] sugar:SC 46.49
K:33 [SER] 0:2597 [U] 3.12 0:2601 [A] 46.49
K:34 [VAL] 0:2597 [U] 2.81 0:2601 [A] sugar:BB 72.12
K:34 [VAL] 0:2598 [U] 4.77 0:2600 [A] 72.12
K:35 [HIS] 0:2597 [U] 3.96 0:2601 [A] 1.75
K:35 [HIS] 0:2598 [U] 3.38 0:2600 [A] 1.75
K:36 [GLY] 0:2597 [U] 3.82 0:2601 [A] 45.82
K:36 [GLY] 0:2598 [U] 2.66 0:2600 [A] 45.82
K:36 [GLY] 0:2599 [A] 4.57 45.82
K:37 [TYR] 0:2597 [U] 4.02 0:2601 [A] 2.6
K:37 [TYR] 0:2598 [U] 3.74 0:2600 [A] 2.6
K:37 [TYR] 0:2601 [A] 3.57 0:2597 [U] base:BB 2.6
K:37 [TYR] 0:2711 [U] 3.51 0:2683 [G] 2.6
K:37 [TYR] 0:2712 [G] 3.03 0:2682 [C] 2.6
K:38 [SER] 0:2582 [G] 4.97 0:2596 [A] 54.1
K:38 [SER] 0:2598 [U] 4.53 0:2600 [A] 54.1
K:38 [SER] 0:2600 [A] 3.15 0:2598 [U] base:SC 54.1
K:38 [SER] 0:2601 [A] 2.62 0:2597 [U] base:SC 54.1
K:38 [SER] 0:2711 [U] 2.66 0:2683 [G] sugar:BB 54.1
K:38 [SER] 0:2712 [G] 3.81 0:2682 [C] 54.1
K:39 [GLY] 0:2581 [U] 4.98 55.85
K:39 [GLY] 0:2582 [G] 3.56 0:2596 [A] 55.85
K:39 [GLY] 0:2601 [A] 4.82 0:2597 [U] 55.85
K:39 [GLY] 0:2711 [U] 4.91 0:2683 [G] 55.85
K:39 [GLY] 0:2712 [G] 3.21 0:2682 [C] 55.85
K:40 [THR] 0:2037 [C] 4.4 0:1742 [A] 49.81
K:40 [THR] 0:2581 [U] 4.6 49.81
K:40 [THR] 0:2582 [G] 3.05 0:2596 [A] 49.81
K:40 [THR] 0:2583 [A] 3.88 0:2595 [U] 49.81
K:40 [THR] 0:2712 [G] 3.69 0:2682 [C] 49.81
K:40 [THR] 0:2713 [G] 3.83 0:2767 [C] 49.81
K:41 [LYS] 0:2037 [C] 4.99 0:1742 [A] 52.72
K:41 [LYS] 0:2545 [U] 4.99 0:2613 [G] 52.72
K:41 [LYS] 0:2546 [U] 2.7 0:2610 [U] 52.72
K:41 [LYS] 0:2547 [C] 4.77 0:2609 [G] 52.72
K:41 [LYS] 0:2582 [G] 3.22 0:2596 [A] 52.72
K:41 [LYS] 0:2583 [A] 3.42 0:2595 [U] 52.72
K:42 [ASN] 0:2035 [C] 4.83 0:1744 [G] 68.25
K:42 [ASN] 0:2036 [C] 3.11 0:1743 [G] 68.25
K:42 [ASN] 0:2546 [U] 3.04 0:2610 [U] 68.25
K:42 [ASN] 0:2582 [G] 4.05 0:2596 [A] 68.25
K:42 [ASN] 0:2583 [A] 2.78 0:2595 [U] 68.25
K:42 [ASN] 0:2584 [G] 4.73 0:2594 [C] 68.25
K:43 [ARG] 0:2036 [C] 3.3 0:1743 [G] 76.23
K:43 [ARG] 0:2037 [C] 2.85 0:1742 [A] 76.23
K:43 [ARG] 0:2583 [A] 3.37 0:2595 [U] 76.23
K:43 [ARG] 0:2711 [U] 4.83 0:2683 [G] 76.23
K:43 [ARG] 0:2712 [G] 2.64 0:2682 [C] 76.23
K:43 [ARG] 0:2713 [G] 3.6 0:2767 [C] 76.23
K:44 [HIS] 0:1744 [G] 3.75 0:2035 [C] 3.53
K:44 [HIS] 0:1747 [A] 3.36 0:2034 [U] base/AA stacks 3.53
K:44 [HIS] 0:2035 [C] 3.02 0:1744 [G] base:SC, sugar:SC 3.53
K:44 [HIS] 0:2036 [C] 2.86 0:1743 [G] sugar:BB 3.53
K:44 [HIS] 0:2583 [A] 4.57 0:2595 [U] 3.53
K:44 [HIS] 0:2584 [G] 3.89 0:2594 [C] 3.53
K:45 [PRO] 0:2583 [A] 3.18 0:2595 [U] 73.81
K:46 [LYS] 0:2711 [U] 4.86 0:2683 [G] 47.01
K:46 [LYS] 0:2712 [G] 3.75 0:2682 [C] 47.01
K:54 [THR] 0:2596 [A] 3.65 0:2582 [G] 28.5
K:54 [THR] 0:2597 [U] 3.14 0:2601 [A] 28.5
K:56 [SER] 0:1993 [C] 2.83 74.69
K:58 [THR] 0:1993 [C] 4.89 58.33
K:66 [ARG] 0:1992 [U] 3.12 base/AA stacks 52.7
K:66 [ARG] 0:1993 [C] 2.64 52.7
K:66 [ARG] 0:1994 [A] 2.74 52.7
K:68 [VAL] 0:1993 [C] 3.77 69.45
K:68 [VAL] 0:2596 [A] 4.56 0:2582 [G] 69.45
K:77 [ARG] 0:1743 [G] 3.93 0:2036 [C] 63.62
K:77 [ARG] 0:1744 [G] 2.86 0:2035 [C] 63.62
K:78 [LYS] 0:1742 [A] 3.0 0:2037 [C] base:SC, sugar:SC 50.93
K:78 [LYS] 0:1743 [G] 3.26 0:2036 [C] 50.93
K:78 [LYS] 0:2722 [G] 4.31 0:2760 [C] 50.93
K:78 [LYS] 0:2762 [C] 2.96 50.93
K:79 [PRO] 0:2721 [U] 4.3 0:2761 [A] 46.1
K:81 [ARG] 0:2720 [C] 4.74 65.43
K:81 [ARG] 0:2763 [G] 4.53 0:2717 [C] 65.43
K:81 [ARG] 0:2764 [C] 2.89 0:2716 [G] 65.43
K:81 [ARG] 0:2765 [C] 4.16 0:2715 [G] 65.43
K:85 [GLY] 0:2720 [C] 3.66 96.92
K:87 [ARG] 0:2720 [C] 2.47 base:SC 11.02
K:87 [ARG] 0:2721 [U] 2.78 0:2761 [A] sugar:SC 11.02
K:87 [ARG] 0:2763 [G] 2.9 0:2717 [C] sugar:SC 11.02
K:87 [ARG] 0:2764 [C] 3.84 0:2716 [G] 11.02
K:93 [ASN] 0:1743 [G] 4.43 0:2036 [C] 98.87
K:93 [ASN] 0:1744 [G] 2.83 0:2035 [C] 98.87
K:120 [ARG] 0:2709 [G] 4.43 0:2685 [C] 44.49

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*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)

Properties of this interface

Interolog group ID Structure ID Structure description
 UniProt ID
 		ECOD label(s)
 		RFAM label(s)
 		Is ribosome? RCSB PDB link
group132 3CC2_K_0 K: 50s ribosomal protein l14p, Haloarcula marismortui (natural) 0: 23s ribosomal RNA, Haloarcula marismortui (natural) P22450 Ribosomal protein L14-related Archaeal large subunit ribosomal RNA ✔

Interologs

Total number of interologs for this interface: 11

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1YHQ_K_0 3CC2_K_0 1.00 1.0 0.12 0.97 Ribosomal protein L14-related Archaeal large subunit ribosomal RNA compare
1VQ8_K_0 3CC2_K_0 0.99 1.0 0.24 0.97 Ribosomal protein L14-related Archaeal large subunit ribosomal RNA compare
1JJ2_J_0 3CC2_K_0 0.99 1.0 0.1 1.0 Ribosomal protein L14-related Archaeal large subunit ribosomal RNA compare
3CC2_K_0 7O7Y_BV_B5 0.73 0.94 1.75 0.41 Ribosomal protein L14-related compare
3CC2_K_0 7RYG_J_A 0.60 0.92 2.25 0.24 Ribosomal protein L14-related compare
3CC2_K_0 7OF0_L_A 0.52 0.95 2.54 0.12 Ribosomal protein L14-related compare
3CC2_K_0 6AZ3_J_4 0.52 0.88 2.33 0.24 Ribosomal protein L14-related compare
3CC2_K_0 6S0Z_I_A 0.60 0.93 2.37 0.28 Ribosomal protein L14-related compare
3CC2_K_0 4Y4O_1O_1A 0.54 0.93 2.31 0.24 Ribosomal protein L14-related compare
3CC2_K_0 7K00_j_a 0.55 0.91 2.12 0.26 Ribosomal protein L14-related compare
3CC2_K_0 6AZ3_J_2 0.85 0.83 1.03 0.47 Ribosomal protein L14-related compare