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All interfaces > All interologs > Interface groups > group132 > 7OF0_L_A

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Licorice
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Licorice
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Chain
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Hydrophobicity
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Conservation*

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Rim - Core

Contacts -

7OF0_L
7OF0_A
Distance
Base Pair
Hbond nuc:res
Base Stacking
Residue conservation
L:31 [ALA] A:2469 [A] 2.77 A:2658 [U] sugar:BB 57.42
L:31 [ALA] A:2470 [G] 4.35 A:2657 [C] 57.42
L:32 [ILE] A:2469 [A] 4.95 A:2658 [U] 88.89
L:33 [GLN] A:2469 [A] 3.55 A:2658 [U] 45.46
L:33 [GLN] A:2470 [G] 3.86 A:2657 [C] 45.46
L:33 [GLN] A:2658 [U] 2.64 A:2469 [A] base:SC 45.46
L:33 [GLN] A:2659 [C] 4.46 A:2468 [A] 45.46
L:34 [LYS] A:2470 [G] 4.44 A:2657 [C] 10.14
L:34 [LYS] A:2473 [A] 3.99 A:2656 [U] 10.14
L:34 [LYS] A:3035 [C] 2.89 A:3047 [G] base:SC 10.14
L:34 [LYS] A:3036 [G] 4.67 A:3046 [C] 10.14
L:34 [LYS] A:3047 [G] 3.68 A:3035 [C] 10.14
L:34 [LYS] A:3048 [A] 4.78 A:3034 [U] 10.14
L:35 [MET] A:2470 [G] 4.63 A:2657 [C] 46.81
L:35 [MET] A:2471 [G] 3.26 46.81
L:35 [MET] A:2472 [A] 4.06 A:2654 [U] 46.81
L:35 [MET] A:2473 [A] 3.47 A:2656 [U] 46.81
L:35 [MET] A:2615 [A] 4.38 46.81
L:35 [MET] A:2616 [A] 4.31 46.81
L:36 [THR] A:2470 [G] 3.0 A:2657 [C] 84.21
L:36 [THR] A:2471 [G] 3.57 84.21
L:37 [ARG] A:2470 [G] 4.03 A:2657 [C] 28.71
L:37 [ARG] A:2471 [G] 2.6 28.71
L:37 [ARG] A:2652 [G] 3.24 28.71
L:37 [ARG] A:2653 [C] 4.52 A:2478 [G] 28.71
L:51 [TYR] A:2614 [U] 4.36 10.06
L:51 [TYR] A:2615 [A] 4.95 10.06
L:52 [HIS] A:2614 [U] 3.17 34.8
L:52 [HIS] A:2651 [A] 4.14 A:2484 [C] 34.8
L:53 [ARG] A:2613 [U] 3.8 A:2619 [A] 61.44
L:53 [ARG] A:2614 [U] 3.29 61.44
L:53 [ARG] A:2649 [U] 4.96 A:2486 [U] 61.44
L:53 [ARG] A:2650 [C] 3.4 A:2485 [U] 61.44
L:53 [ARG] A:2651 [A] 3.33 A:2484 [C] 61.44
L:56 [ARG] A:2471 [G] 4.17 55.79
L:56 [ARG] A:2472 [A] 2.84 A:2654 [U] 55.79
L:58 [ILE] A:2615 [A] 3.14 90.76
L:59 [HIS] A:3048 [A] 3.0 A:3034 [U] 53.75
L:59 [HIS] A:3049 [U] 3.11 A:3053 [A] sugar:SC 53.75
L:61 [TYR] A:3048 [A] 3.52 A:3034 [U] 13.62
L:61 [TYR] A:3049 [U] 2.58 A:3053 [A] 13.62
L:61 [TYR] A:3050 [U] 4.99 13.62
L:62 [LYS] A:3141 [A] 4.25 A:3115 [U] 54.82
L:62 [LYS] A:3142 [A] 3.88 A:3114 [U] 54.82
L:63 [LYS] A:3050 [U] 2.94 27.07
L:63 [LYS] A:3051 [A] 2.82 27.07
L:63 [LYS] A:3115 [U] 4.96 A:3141 [A] 27.07
L:63 [LYS] A:3116 [C] 4.36 A:3140 [A] 27.07
L:63 [LYS] A:3142 [A] 3.61 A:3114 [U] 27.07
L:64 [ASN] A:3142 [A] 3.51 A:3114 [U] 35.67
L:64 [ASN] A:3143 [U] 3.53 A:3113 [A] 35.67
L:68 [LYS] A:3163 [G] 4.72 A:3148 [C] 0.24
L:74 [LEU] A:3048 [A] 3.56 A:3034 [U] 46.51
L:74 [LEU] A:3049 [U] 4.72 A:3053 [A] 46.51
L:76 [ALA] A:2615 [A] 3.39 80.46
L:79 [GLY] A:2615 [A] 3.62 37.91
L:80 [GLN] A:2615 [A] 4.49 52.53
L:81 [LYS] A:2615 [A] 3.41 sugar:SC 61.09
L:81 [LYS] A:3047 [G] 2.82 A:3035 [C] 61.09
L:81 [LYS] A:3048 [A] 3.02 A:3034 [U] 61.09
L:83 [LYS] A:3049 [U] 3.54 A:3053 [A] 53.67
L:90 [CYS] A:2469 [A] 3.67 A:2658 [U] 62.28
L:90 [CYS] A:2470 [G] 3.28 A:2657 [C] 62.28
L:91 [MET] A:2468 [A] 3.84 A:2659 [C] 32.1
L:91 [MET] A:2469 [A] 3.61 A:2658 [U] 32.1
L:91 [MET] A:3162 [C] 3.53 32.1
L:92 [PRO] A:2468 [A] 3.48 A:2659 [C] 23.02
L:92 [PRO] A:2469 [A] 4.77 A:2658 [U] 23.02
L:92 [PRO] A:3152 [C] 3.55 A:3161 [G] 23.02
L:92 [PRO] A:3153 [U] 4.16 A:3160 [A] 23.02
L:93 [GLY] A:3152 [C] 4.71 A:3161 [G] 37.79
L:95 [ARG] A:3151 [A] 2.86 base:SC 78.95
L:95 [ARG] A:3152 [C] 3.08 A:3161 [G] 78.95
L:99 [ARG] A:2469 [A] 4.85 A:2658 [U] 40.5
L:103 [ASN] A:2469 [A] 4.32 A:2658 [U] 98.76
L:103 [ASN] A:2470 [G] 3.27 A:2657 [C] 98.76
L:131 [GLU] A:3139 [G] 4.32 A:3117 [C] 24.52
L:131 [GLU] A:3140 [A] 3.12 A:3116 [C] 24.52

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*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)

Properties of this interface

Interolog group ID Structure ID Structure description
 UniProt ID
 		ECOD label(s)
 		RFAM label(s)
 		Is ribosome? RCSB PDB link
group132 7OF0_L_A L: 39s ribosomal protein l14, mitochondrial, Homo sapiens (natural) A: 16s ribosomal RNA, Homo sapiens (natural) Q6P1L8 Ribosomal protein L14-related Bacterial large subunit ribosomal RNA ✔

Interologs

Total number of interologs for this interface: 8

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1YHQ_K_0 7OF0_L_A 0.52 0.95 2.53 0.12 Ribosomal protein L14-related compare
1VQ8_K_0 7OF0_L_A 0.52 0.95 2.51 0.12 Ribosomal protein L14-related compare
1JJ2_J_0 7OF0_L_A 0.53 0.95 2.54 0.12 Ribosomal protein L14-related compare
7OF0_L_A 7RYG_J_A 0.63 0.93 2.2 0.19 Ribosomal protein L14-related Bacterial large subunit ribosomal RNA compare
4Y4O_1O_1A 7OF0_L_A 0.62 0.97 1.57 0.28 Ribosomal protein L14-related Bacterial large subunit ribosomal RNA compare
3CC2_K_0 7OF0_L_A 0.52 0.95 2.54 0.12 Ribosomal protein L14-related compare
6S0Z_I_A 7OF0_L_A 0.57 0.96 2.06 0.22 Ribosomal protein L14-related Bacterial large subunit ribosomal RNA compare
6AZ3_J_2 7OF0_L_A 0.66 0.53 2.07 0.09 Ribosomal protein L14-related compare