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All interfaces > All interologs > Interface groups > group133 > 1MJI_A_C vs 7ASM_F_A

Interface analysis


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Common contacts -

1MJI_A
1MJI_C
7ASM_F
7ASM_A
Conserved?
A:154 [GLY] C:58 [C] F:151 [GLY] A:2332 [U] ✔
A:127 [GLY] C:55 [U] F:124 [GLY] A:2329 [U] ✔
A:124 [SER] C:56 [G] F:121 [ALA] A:2330 [G] ✔
A:132 [ASN] C:56 [G] F:129 [THR] A:2330 [G] ✔
A:132 [ASN] C:57 [C] F:129 [THR] A:2331 [G] ✔
A:125 [PHE] C:55 [U] F:122 [PHE] A:2329 [U] ✔
A:126 [ASP] C:55 [U] F:123 [ASP] A:2329 [U] ✔
A:126 [ASP] C:56 [G] F:123 [ASP] A:2330 [G] ✔
A:134 [GLY] C:57 [C] F:131 [GLY] A:2331 [G] ✔
A:134 [GLY] C:58 [C] F:131 [GLY] A:2332 [U] ✔
A:133 [LEU] C:57 [C] F:130 [LEU] A:2331 [G] ✔
A:123 [ASN] C:56 [G] F:120 [LYS] A:2330 [G] ✔
A:124 [SER] C:57 [C] F:121 [ALA] A:2331 [G] ❌ 7ASM_F_A
A:125 [PHE] C:56 [G] F:122 [PHE] A:2330 [G] ❌ 7ASM_F_A
A:136 [ARG] C:59 [C] F:133 [LYS] A:2333 [U] ❌ 7ASM_F_A
A:123 [ASN] C:57 [C] F:120 [LYS] A:2331 [G] ❌ 7ASM_F_A
A:136 [ARG] C:58 [C] F:133 [LYS] A:2332 [U] ❌ 1MJI_A_C
A:42 [GLY] C:58 [C] F:39 [GLY] A:2332 [U] ❌ 1MJI_A_C
A:75 [LYS] C:49 [C] F:72 [LYS] A:2324 [C] ❌ 7ASM_A:2324 no longer at interface
A:75 [LYS] C:50 [A] F:72 [LYS] A:2325 [A] ❌ 7ASM_A:2325 no longer at interface
A:74 [LYS] C:49 [C] F:71 [LYS] A:2324 [C] ❌ 7ASM_A:2324 no longer at interface
A:74 [LYS] C:50 [A] F:71 [LYS] A:2325 [A] ❌ 7ASM_A:2325 no longer at interface
A:156 [ASP] C:57 [C] F:153 [ASP] A:2331 [G] ❌ 7ASM_F:153 no longer at interface
A:156 [ASP] C:58 [C] F:153 [ASP] A:2332 [U] ❌ 7ASM_F:153 no longer at interface
A:153 [ARG] C:58 [C] F:150 [ARG] A:2332 [U] ❌ 7ASM_F:150 no longer at interface
A:153 [ARG] C:59 [C] F:150 [ARG] A:2333 [U] ❌ 7ASM_F:150 no longer at interface
A:131 [TYR] C:56 [G] F:128 [TYR] A:2330 [G] ❌ 1MJI_A:131 no longer at interface
A:135 [LEU] C:58 [C] F:132 [VAL] A:2332 [U] ❌ 1MJI_A:135 no longer at interface
A:155 [MSE] C:58 [C] F:152 [MET] A:2332 [U] ❌ 1MJI_A:155 no longer at interface
A:41 [GLN] C:58 [C] F:38 [MET] A:2332 [U] ❌ 1MJI_A:41 no longer at interface
A:43 [LEU] C:58 [C] F:40 [VAL] A:2332 [U] ❌ 1MJI_A:43 no longer at interface
A:43 [LEU] C:59 [C] F:40 [VAL] A:2333 [U] ❌ 1MJI_A:43 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L5 0.7 1.49 0.17 0.82 0.3 0.81 0.42 0.39 0.31 0.00 0.70


Other pairs involving 1MJI_A_C or 7ASM_F_A

Total number of entries: 12

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
4Y4O_1G_1A 7ASM_F_A 0.41 0.95 3.56 0.49 Ribosomal protein L5 Bacterial large subunit ribosomal RNA compare
7ASM_F_A 7RYG_F_A 0.34 0.97 2.92 0.21 Ribosomal protein L5 Bacterial large subunit ribosomal RNA compare
7ASM_F_A 7K00_f_a 0.34 0.96 3.21 0.11 Ribosomal protein L5 Bacterial large subunit ribosomal RNA compare
7ASM_F_A 7O7Y_BJ_B5 0.34 0.89 4.56 0.14 Ribosomal protein L5 compare
6AZ3_D_2 7ASM_F_A 0.36 0.82 3.6 0.06 Ribosomal protein L5 compare
1VQ8_D_0 7ASM_F_A 0.45 0.91 3.35 0.31 Ribosomal protein L5 compare
1MJI_A_C 1VQ8_D_0 0.69 0.56 1.45 0.06 Ribosomal protein L5 compare
1MJI_A_C 5NS4_A_C 0.94 0.98 0.49 0.82 Ribosomal protein L5 compare
1MJI_A_C 7ASM_F_A 0.39 0.7 1.49 0.17 Ribosomal protein L5 compare
1MJI_A_C 5NS3_A_C 0.98 0.98 0.47 0.8 Ribosomal protein L5 compare
1YHQ_D_0 7ASM_F_A 0.46 0.91 3.22 0.31 Ribosomal protein L5 compare
6S0Z_F_A 7ASM_F_A 0.57 0.98 2.05 0.88 Ribosomal protein L5 Bacterial large subunit ribosomal RNA compare