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All interfaces > All interologs > Interface groups > group133 > 1YHQ_D_0 vs 7O7Y_BJ_B5

Interface analysis


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Common contacts -

1YHQ_D
1YHQ_0
7O7Y_BJ
7O7Y_B5
Conserved?
D:24 [HIS] 0:2347 [C] BJ:22 [LEU] B5:4005 [C] ✔
D:54 [ALA] 0:2346 [C] BJ:52 [LYS] B5:4004 [C] ✔
D:107 [GLY] 0:2338 [G] BJ:107 [PHE] B5:3996 [G] ✔
D:60 [GLU] 0:2344 [G] BJ:60 [PHE] B5:4002 [A] ✔
D:60 [GLU] 0:2345 [A] BJ:60 [PHE] B5:4003 [A] ✔
D:96 [SER] 0:2337 [G] BJ:97 [ASN] B5:3995 [G] ✔
D:96 [SER] 0:2338 [G] BJ:97 [ASN] B5:3996 [G] ✔
D:27 [ILE] 0:2345 [A] BJ:25 [CYS] B5:4003 [A] ✔
D:150 [SER] 0:2351 [C] BJ:150 [CYS] B5:4009 [C] ✔
D:99 [ASP] 0:2336 [G] BJ:101 [ASP] B5:3994 [A] ✔
D:145 [ASP] 0:2329 [C] BJ:145 [LYS] B5:3987 [C] ✔
D:145 [ASP] 0:2368 [A] BJ:145 [LYS] B5:4026 [A] ✔
D:104 [PHE] 0:2337 [G] BJ:104 [ASN] B5:3995 [G] ✔
D:53 [LYS] 0:2346 [C] BJ:51 [SER] B5:4004 [C] ✔
D:53 [LYS] 0:2347 [C] BJ:51 [SER] B5:4005 [C] ✔
D:69 [ILE] 0:2346 [C] BJ:69 [ALA] B5:4004 [C] ✔
D:106 [PHE] 0:2338 [G] BJ:106 [GLY] B5:3996 [G] ✔
D:105 [SER] 0:2337 [G] BJ:105 [PHE] B5:3995 [G] ✔
D:55 [LYS] 0:2345 [A] BJ:53 [ALA] B5:4003 [A] ✔
D:55 [LYS] 0:2346 [C] BJ:53 [ALA] B5:4004 [C] ✔
D:129 [ASP] 0:2338 [G] BJ:130 [PHE] B5:3996 [G] ✔
D:98 [PHE] 0:2336 [G] BJ:100 [SER] B5:3994 [A] ✔
D:98 [PHE] 0:2337 [G] BJ:100 [SER] B5:3995 [G] ✔
D:130 [VAL] 0:2338 [G] BJ:131 [TYR] B5:3996 [G] ✔
D:97 [GLN] 0:2337 [G] BJ:99 [PHE] B5:3995 [G] ✔
D:24 [HIS] 0:2338 [G] BJ:22 [LEU] B5:3996 [G] ❌ 7O7Y_BJ_B5
D:24 [HIS] 0:2346 [C] BJ:22 [LEU] B5:4004 [C] ❌ 7O7Y_BJ_B5
D:54 [ALA] 0:2345 [A] BJ:52 [LYS] B5:4003 [A] ❌ 7O7Y_BJ_B5
D:99 [ASP] 0:2337 [G] BJ:101 [ASP] B5:3995 [G] ❌ 7O7Y_BJ_B5
D:99 [ASP] 0:2348 [C] BJ:101 [ASP] B5:4006 [U] ❌ 7O7Y_BJ_B5
D:99 [ASP] 0:2349 [G] BJ:101 [ASP] B5:4007 [C] ❌ 7O7Y_BJ_B5
D:100 [ASP] 0:2336 [G] BJ:102 [THR] B5:3994 [A] ❌ 7O7Y_BJ_B5
D:69 [ILE] 0:2345 [A] BJ:69 [ALA] B5:4003 [A] ❌ 7O7Y_BJ_B5
D:105 [SER] 0:2338 [G] BJ:105 [PHE] B5:3996 [G] ❌ 7O7Y_BJ_B5
D:129 [ASP] 0:2346 [C] BJ:130 [PHE] B5:4004 [C] ❌ 7O7Y_BJ_B5
D:26 [GLY] 0:2345 [A] BJ:24 [ILE] B5:4003 [A] ❌ 7O7Y_BJ_B5
D:26 [GLY] 0:2346 [C] BJ:24 [ILE] B5:4004 [C] ❌ 7O7Y_BJ_B5
D:97 [GLN] 0:2338 [G] BJ:99 [PHE] B5:3996 [G] ❌ 7O7Y_BJ_B5
D:100 [ASP] 0:2350 [G] BJ:102 [THR] B5:4008 [C] ❌ 1YHQ_D_0
D:100 [ASP] 0:2349 [G] BJ:102 [THR] B5:4007 [C] ❌ 1YHQ_D_0
D:104 [PHE] 0:2349 [G] BJ:104 [ASN] B5:4007 [C] ❌ 1YHQ_D_0
D:104 [PHE] 0:2348 [C] BJ:104 [ASN] B5:4006 [U] ❌ 1YHQ_D_0
D:106 [PHE] 0:2337 [G] BJ:106 [GLY] B5:3995 [G] ❌ 1YHQ_D_0
D:130 [VAL] 0:2337 [G] BJ:131 [TYR] B5:3995 [G] ❌ 1YHQ_D_0
D:130 [VAL] 0:2336 [G] BJ:131 [TYR] B5:3994 [A] ❌ 1YHQ_D_0
D:130 [VAL] 0:2348 [C] BJ:131 [TYR] B5:4006 [U] ❌ 1YHQ_D_0
D:27 [ILE] 0:2346 [C] BJ:25 [CYS] B5:4004 [C] ❌ 1YHQ_D_0
D:56 [ARG] 0:2346 [C] BJ:54 [ARG] B5:4004 [C] ❌ 1YHQ_D_0
D:56 [ARG] 0:2345 [A] BJ:54 [ARG] B5:4003 [A] ❌ 1YHQ_D_0
D:97 [GLN] 0:2336 [G] BJ:99 [PHE] B5:3994 [A] ❌ 1YHQ_D_0
D:56 [ARG] 0:2332 [A] BJ:54 [ARG] B5:3990 [A] ❌ 7O7Y_B5:3990 no longer at interface
D:56 [ARG] 0:2333 [G] BJ:54 [ARG] B5:3991 [G] ❌ 7O7Y_B5:3991 no longer at interface
D:53 [LYS] 0:2373 [U] BJ:51 [SER] B5:4031 [U] ❌ 7O7Y_B5:4031 no longer at interface
D:53 [LYS] 0:2374 [G] BJ:51 [SER] B5:4032 [C] ❌ 7O7Y_B5:4032 no longer at interface
D:55 [LYS] 0:2332 [A] BJ:53 [ALA] B5:3990 [A] ❌ 7O7Y_B5:3990 no longer at interface
D:65 [GLU] 0:2373 [U] BJ:66 [GLU] B5:4031 [U] ❌ 7O7Y_BJ:66, 7O7Y_B5:4031 no longer at interface
D:99 [ASP] 0:2335 [C] BJ:101 [ASP] B5:3993 [G] ❌ 1YHQ_0:2335 no longer at interface
D:100 [ASP] 0:2335 [C] BJ:102 [THR] B5:3993 [G] ❌ 1YHQ_0:2335 no longer at interface
D:145 [ASP] 0:2328 [U] BJ:145 [LYS] B5:3986 [G] ❌ 1YHQ_0:2328 no longer at interface
D:131 [THR] 0:2337 [G] BJ:132 [VAL] B5:3995 [G] ❌ 7O7Y_BJ:132 no longer at interface
D:131 [THR] 0:2347 [C] BJ:132 [VAL] B5:4005 [C] ❌ 7O7Y_BJ:132 no longer at interface
D:131 [THR] 0:2348 [C] BJ:132 [VAL] B5:4006 [U] ❌ 7O7Y_BJ:132 no longer at interface
D:133 [ASN] 0:2348 [C] BJ:134 [LEU] B5:4006 [U] ❌ 7O7Y_BJ:134 no longer at interface
D:133 [ASN] 0:2349 [G] BJ:134 [LEU] B5:4007 [C] ❌ 7O7Y_BJ:134 no longer at interface
D:58 [VAL] 0:2344 [G] BJ:56 [THR] B5:4002 [A] ❌ 7O7Y_BJ:56 no longer at interface
D:58 [VAL] 0:2345 [A] BJ:56 [THR] B5:4003 [A] ❌ 7O7Y_BJ:56 no longer at interface
D:70 [GLY] 0:2346 [C] BJ:70 [VAL] B5:4004 [C] ❌ 7O7Y_BJ:70 no longer at interface
D:22 [VAL] 0:2347 [C] BJ:20 [LEU] B5:4005 [C] ❌ 7O7Y_BJ:20 no longer at interface
D:22 [VAL] 0:2348 [C] BJ:20 [LEU] B5:4006 [U] ❌ 7O7Y_BJ:20 no longer at interface
D:72 [LYS] 0:2347 [C] BJ:72 [CYS] B5:4005 [C] ❌ 7O7Y_BJ:72 no longer at interface
D:72 [LYS] 0:2348 [C] BJ:72 [CYS] B5:4006 [U] ❌ 7O7Y_BJ:72 no longer at interface
D:103 [ASN] 0:2348 [C] BJ:103 [GLY] B5:4006 [U] ❌ 7O7Y_BJ:103 no longer at interface
D:103 [ASN] 0:2349 [G] BJ:103 [GLY] B5:4007 [C] ❌ 7O7Y_BJ:103 no longer at interface
D:20 [LYS] 0:2348 [C] BJ:18 [ARG] B5:4006 [U] ❌ 7O7Y_BJ:18 no longer at interface
D:20 [LYS] 0:2349 [G] BJ:18 [ARG] B5:4007 [C] ❌ 7O7Y_BJ:18 no longer at interface
D:52 [THR] 0:2346 [C] BJ:50 [PHE] B5:4004 [C] ❌ 7O7Y_BJ:50 no longer at interface
D:52 [THR] 0:2347 [C] BJ:50 [PHE] B5:4005 [C] ❌ 7O7Y_BJ:50 no longer at interface
D:139 [TYR] 0:2349 [G] BJ:139 [PHE] B5:4007 [C] ❌ 7O7Y_BJ:139 no longer at interface
D:139 [TYR] 0:2350 [G] BJ:139 [PHE] B5:4008 [C] ❌ 7O7Y_BJ:139 no longer at interface
D:143 [LYS] 0:2349 [G] BJ:143 [ASP] B5:4007 [C] ❌ 7O7Y_BJ:143 no longer at interface
D:62 [ASP] 0:2345 [A] BJ:63 [ARG] B5:4003 [A] ❌ 7O7Y_BJ:63 no longer at interface
D:156 [ARG] 0:2350 [G] BJ:155 [HIS] B5:4008 [C] ❌ 7O7Y_BJ:155 no longer at interface
D:156 [ARG] 0:2351 [C] BJ:155 [HIS] B5:4009 [C] ❌ 7O7Y_BJ:155 no longer at interface
D:128 [LEU] 0:2346 [C] BJ:129 [ASP] B5:4004 [C] ❌ 1YHQ_D:128 no longer at interface
D:128 [LEU] 0:2338 [G] BJ:129 [ASP] B5:3996 [G] ❌ 1YHQ_D:128 no longer at interface
D:132 [VAL] 0:2349 [G] BJ:133 [VAL] B5:4007 [C] ❌ 1YHQ_D:132 no longer at interface
D:132 [VAL] 0:2348 [C] BJ:133 [VAL] B5:4006 [U] ❌ 1YHQ_D:132 no longer at interface
D:142 [ALA] 0:2350 [G] BJ:142 [ALA] B5:4008 [C] ❌ 1YHQ_D:142 no longer at interface
D:146 [LYS] 0:2368 [A] BJ:146 [ARG] B5:4026 [A] ❌ 1YHQ_D:146 no longer at interface
D:21 [VAL] 0:2349 [G] BJ:19 [LYS] B5:4007 [C] ❌ 1YHQ_D:21 no longer at interface
D:21 [VAL] 0:2348 [C] BJ:19 [LYS] B5:4006 [U] ❌ 1YHQ_D:21 no longer at interface
D:23 [VAL] 0:2347 [C] BJ:21 [CYS] B5:4005 [C] ❌ 1YHQ_D:23 no longer at interface
D:23 [VAL] 0:2348 [C] BJ:21 [CYS] B5:4006 [U] ❌ 1YHQ_D:23 no longer at interface
D:25 [MET] 0:2346 [C] BJ:23 [ASN] B5:4004 [C] ❌ 1YHQ_D:25 no longer at interface
D:25 [MET] 0:2347 [C] BJ:23 [ASN] B5:4005 [C] ❌ 1YHQ_D:25 no longer at interface
D:25 [MET] 0:2338 [G] BJ:23 [ASN] B5:3996 [G] ❌ 1YHQ_D:25 no longer at interface
D:28 [GLY] 0:2345 [A] BJ:27 [GLY] B5:4003 [A] ❌ 1YHQ_D:28 no longer at interface
D:57 [THR] 0:2346 [C] BJ:55 [TYR] B5:4004 [C] ❌ 1YHQ_D:57 no longer at interface
D:59 [GLY] 0:2345 [A] BJ:57 [VAL] B5:4003 [A] ❌ 1YHQ_D:59 no longer at interface
D:59 [GLY] 0:2344 [G] BJ:57 [VAL] B5:4002 [A] ❌ 1YHQ_D:59 no longer at interface
D:61 [PHE] 0:2345 [A] BJ:62 [ILE] B5:4003 [A] ❌ 1YHQ_D:61 no longer at interface
D:68 [PRO] 0:2346 [C] BJ:68 [ILE] B5:4004 [C] ❌ 1YHQ_D:68 no longer at interface
D:68 [PRO] 0:2345 [A] BJ:68 [ILE] B5:4003 [A] ❌ 1YHQ_D:68 no longer at interface
D:71 [ALA] 0:2347 [C] BJ:71 [HIS] B5:4005 [C] ❌ 1YHQ_D:71 no longer at interface
D:71 [ALA] 0:2348 [C] BJ:71 [HIS] B5:4006 [U] ❌ 1YHQ_D:71 no longer at interface
D:73 [VAL] 0:2348 [C] BJ:73 [THR] B5:4006 [U] ❌ 1YHQ_D:73 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L5 0.93 3.99 0.05 0.92 0.94 0.59 0.76 0.31 0.21 0.04 0.69


Other pairs involving 1YHQ_D_0 or 7O7Y_BJ_B5

Total number of entries: 18

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1VQ8_D_0 1YHQ_D_0 0.99 1.0 0.39 0.94 Ribosomal protein L5 Archaeal large subunit ribosomal RNA compare
1YHQ_D_0 4Y4O_1G_1A 0.73 0.93 3.03 0.22 Ribosomal protein L5 compare
1YHQ_D_0 5NS3_A_C 0.68 0.64 1.27 0.1 Ribosomal protein L5 compare
1YHQ_D_0 5NS4_A_C 0.72 0.65 1.31 0.09 Ribosomal protein L5 compare
1YHQ_D_0 6AZ3_D_2 0.66 0.81 2.69 0.24 Ribosomal protein L5 compare
1YHQ_D_0 6S0Z_F_A 0.68 0.93 3.49 0.29 Ribosomal protein L5 compare
1YHQ_D_0 7ASM_F_A 0.46 0.91 3.22 0.31 Ribosomal protein L5 compare
1YHQ_D_0 7K00_f_a 0.40 0.9 3.5 0.14 Ribosomal protein L5 compare
4Y4O_1G_1A 7O7Y_BJ_B5 0.48 0.89 4.25 0.09 Ribosomal protein L5 compare
7ASM_F_A 7O7Y_BJ_B5 0.34 0.89 4.56 0.14 Ribosomal protein L5 compare
6AZ3_D_2 7O7Y_BJ_B5 0.92 0.92 0.74 0.75 Ribosomal protein L5 Eukaryotic large subunit ribosomal RNA compare
7K00_f_a 7O7Y_BJ_B5 0.84 0.89 3.13 0.33 Ribosomal protein L5 compare
1VQ8_D_0 7O7Y_BJ_B5 0.34 0.93 3.98 0.05 Ribosomal protein L5 compare
5NS3_A_C 7O7Y_BJ_B5 0.60 0.66 1.88 0.3 Ribosomal protein L5 compare
5NS4_A_C 7O7Y_BJ_B5 0.64 0.68 1.95 0.27 Ribosomal protein L5 compare
1YHQ_D_0 7O7Y_BJ_B5 0.31 0.93 3.99 0.05 Ribosomal protein L5 compare
6S0Z_F_A 7O7Y_BJ_B5 0.35 0.89 4.72 0.15 Ribosomal protein L5 compare
1YHQ_D_0 7RYG_F_A 0.71 0.9 2.81 0.38 Ribosomal protein L5 compare