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All interfaces > All interologs > Interface groups > group133 > 4Y4O_1G_1A vs 6AZ3_D_2

Interface analysis


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Common contacts -

4Y4O_1G
4Y4O_1A
6AZ3_D
6AZ3_2
Conserved?
1G:157 [ILE] 1A:2316 [G] D:129 [PHE] 2:1101 [A] ✔
1G:75 [LYS] 1A:2324 [U] D:53 [ARG] 2:1109 [U] ✔
1G:128 [ARG] 1A:2327 [G] D:101 [THR] 2:1112 [C] ✔
1G:128 [ARG] 1A:2328 [C] D:101 [THR] 2:1113 [A] ✔
1G:156 [ASP] 1A:2316 [G] D:128 [ASP] 2:1101 [A] ✔
1G:156 [ASP] 1A:2317 [A] D:128 [ASP] 2:1102 [A] ✔
1G:73 [ALA] 1A:2324 [U] D:52 [ALA] 2:1109 [U] ✔
1G:36 [LYS] 1A:2326 [C] D:18 [LYS] 2:1111 [U] ✔
1G:36 [LYS] 1A:2327 [G] D:18 [LYS] 2:1112 [C] ✔
1G:154 [GLY] 1A:2317 [A] D:126 [GLY] 2:1102 [A] ✔
1G:38 [VAL] 1A:2325 [C] D:20 [CYS] 2:1110 [C] ✔
1G:38 [VAL] 1A:2326 [C] D:20 [CYS] 2:1111 [U] ✔
1G:80 [PHE] 1A:2320 [G] D:59 [PHE] 2:1105 [G] ✔
1G:80 [PHE] 1A:2322 [A] D:59 [PHE] 2:1107 [A] ✔
1G:80 [PHE] 1A:2323 [A] D:59 [PHE] 2:1108 [A] ✔
1G:127 [GLY] 1A:2314 [G] D:100 [ASP] 2:1099 [G] ✔
1G:44 [GLY] 1A:2319 [G] D:26 [GLY] 2:1104 [A] ✔
1G:44 [GLY] 1A:2323 [A] D:26 [GLY] 2:1108 [A] ✔
1G:124 [SER] 1A:2315 [G] D:97 [ASN] 2:1100 [G] ✔
1G:124 [SER] 1A:2316 [G] D:97 [ASN] 2:1101 [A] ✔
1G:41 [GLN] 1A:2324 [U] D:23 [ILE] 2:1109 [U] ✔
1G:71 [THR] 1A:2324 [U] D:50 [SER] 2:1109 [U] ✔
1G:71 [THR] 1A:2325 [C] D:50 [SER] 2:1110 [C] ✔
1G:132 [ASN] 1A:2315 [G] D:105 [GLY] 2:1100 [G] ✔
1G:132 [ASN] 1A:2316 [G] D:105 [GLY] 2:1101 [A] ✔
1G:125 [PHE] 1A:2315 [G] D:98 [PHE] 2:1100 [G] ✔
1G:153 [ARG] 1A:2317 [A] D:125 [TYR] 2:1102 [A] ✔
1G:40 [ASN] 1A:2316 [G] D:22 [ASN] 2:1101 [A] ✔
1G:40 [ASN] 1A:2324 [U] D:22 [ASN] 2:1109 [U] ✔
1G:40 [ASN] 1A:2325 [C] D:22 [ASN] 2:1110 [C] ✔
1G:42 [GLY] 1A:2318 [C] D:24 [CYS] 2:1103 [C] ✔
1G:42 [GLY] 1A:2319 [G] D:24 [CYS] 2:1104 [A] ✔
1G:42 [GLY] 1A:2323 [A] D:24 [CYS] 2:1108 [A] ✔
1G:42 [GLY] 1A:2324 [U] D:24 [CYS] 2:1109 [U] ✔
1G:130 [ASN] 1A:2315 [G] D:103 [SER] 2:1100 [G] ✔
1G:130 [ASN] 1A:2326 [C] D:103 [SER] 2:1111 [U] ✔
1G:126 [ASP] 1A:2314 [G] D:99 [SER] 2:1099 [G] ✔
1G:126 [ASP] 1A:2315 [G] D:99 [SER] 2:1100 [G] ✔
1G:91 [ARG] 1A:2325 [C] D:70 [HIS] 2:1110 [C] ✔
1G:91 [ARG] 1A:2326 [C] D:70 [HIS] 2:1111 [U] ✔
1G:158 [ALA] 1A:2326 [C] D:130 [TYR] 2:1111 [U] ✔
1G:134 [GLY] 1A:2316 [G] D:107 [GLY] 2:1101 [A] ✔
1G:134 [GLY] 1A:2317 [A] D:107 [GLY] 2:1102 [A] ✔
1G:131 [TYR] 1A:2315 [G] D:104 [PHE] 2:1100 [G] ✔
1G:135 [LEU] 1A:2317 [A] D:108 [ILE] 2:1102 [A] ✔
1G:136 [ARG] 1A:2317 [A] D:109 [ASP] 2:1102 [A] ✔
1G:133 [LEU] 1A:2316 [G] D:106 [PHE] 2:1101 [A] ✔
1G:160 [VAL] 1A:2326 [C] D:132 [VAL] 2:1111 [U] ✔
1G:160 [VAL] 1A:2327 [G] D:132 [VAL] 2:1112 [C] ✔
1G:89 [GLY] 1A:2324 [U] D:68 [ALA] 2:1109 [U] ✔
1G:123 [ASN] 1A:2315 [G] D:96 [TYR] 2:1100 [G] ✔
1G:123 [ASN] 1A:2316 [G] D:96 [TYR] 2:1101 [A] ✔
1G:155 [MET] 1A:2317 [A] D:127 [MET] 2:1102 [A] ✔
1G:72 [ARG] 1A:2324 [U] D:51 [ARG] 2:1109 [U] ✔
1G:43 [LEU] 1A:2319 [G] D:25 [VAL] 2:1104 [A] ✔
1G:75 [LYS] 1A:2322 [A] D:53 [ARG] 2:1107 [A] ❌ 6AZ3_D_2
1G:75 [LYS] 1A:2323 [A] D:53 [ARG] 2:1108 [A] ❌ 6AZ3_D_2
1G:156 [ASP] 1A:2324 [U] D:128 [ASP] 2:1109 [U] ❌ 6AZ3_D_2
1G:156 [ASP] 1A:2325 [C] D:128 [ASP] 2:1110 [C] ❌ 6AZ3_D_2
1G:73 [ALA] 1A:2323 [A] D:52 [ALA] 2:1108 [A] ❌ 6AZ3_D_2
1G:41 [GLN] 1A:2317 [A] D:23 [ILE] 2:1102 [A] ❌ 6AZ3_D_2
1G:132 [ASN] 1A:2314 [G] D:105 [GLY] 2:1099 [G] ❌ 6AZ3_D_2
1G:132 [ASN] 1A:2325 [C] D:105 [GLY] 2:1110 [C] ❌ 6AZ3_D_2
1G:132 [ASN] 1A:2326 [C] D:105 [GLY] 2:1111 [U] ❌ 6AZ3_D_2
1G:125 [PHE] 1A:2314 [G] D:98 [PHE] 2:1099 [G] ❌ 6AZ3_D_2
1G:42 [GLY] 1A:2317 [A] D:24 [CYS] 2:1102 [A] ❌ 6AZ3_D_2
1G:130 [ASN] 1A:2327 [G] D:103 [SER] 2:1112 [C] ❌ 6AZ3_D_2
1G:126 [ASP] 1A:2326 [C] D:99 [SER] 2:1111 [U] ❌ 6AZ3_D_2
1G:126 [ASP] 1A:2327 [G] D:99 [SER] 2:1112 [C] ❌ 6AZ3_D_2
1G:158 [ALA] 1A:2325 [C] D:130 [TYR] 2:1110 [C] ❌ 6AZ3_D_2
1G:155 [MET] 1A:2316 [G] D:127 [MET] 2:1101 [A] ❌ 6AZ3_D_2
1G:43 [LEU] 1A:2317 [A] D:25 [VAL] 2:1102 [A] ❌ 6AZ3_D_2
1G:43 [LEU] 1A:2318 [C] D:25 [VAL] 2:1103 [C] ❌ 6AZ3_D_2
1G:43 [LEU] 1A:2323 [A] D:25 [VAL] 2:1108 [A] ❌ 6AZ3_D_2
1G:128 [ARG] 1A:2314 [G] D:101 [THR] 2:1099 [G] ❌ 4Y4O_1G_1A
1G:130 [ASN] 1A:2314 [G] D:103 [SER] 2:1099 [G] ❌ 4Y4O_1G_1A
1G:133 [LEU] 1A:2317 [A] D:106 [PHE] 2:1102 [A] ❌ 4Y4O_1G_1A
1G:158 [ALA] 1A:2315 [G] D:130 [TYR] 2:1100 [G] ❌ 4Y4O_1G_1A
1G:158 [ALA] 1A:2314 [G] D:130 [TYR] 2:1099 [G] ❌ 4Y4O_1G_1A
1G:158 [ALA] 1A:2316 [G] D:130 [TYR] 2:1101 [A] ❌ 4Y4O_1G_1A
1G:75 [LYS] 1A:2325 [C] D:53 [ARG] 2:1110 [C] ❌ 4Y4O_1G_1A
1G:124 [SER] 1A:2317 [A] D:97 [ASN] 2:1102 [A] ❌ 4Y4O_1G_1A
1G:79 [ASN] 1A:2321 [A] D:57 [ARG] 2:1106 [A] ❌ 6AZ3_D:57, 6AZ3_2:1106 no longer at interface
1G:128 [ARG] 1A:2313 [C] D:101 [THR] 2:1098 [G] ❌ 4Y4O_1A:2313 no longer at interface
1G:39 [ILE] 1A:2325 [C] D:21 [ILE] 2:1110 [C] ❌ 6AZ3_D:21 no longer at interface
1G:88 [ILE] 1A:2323 [A] D:67 [ILE] 2:1108 [A] ❌ 6AZ3_D:67 no longer at interface
1G:88 [ILE] 1A:2324 [U] D:67 [ILE] 2:1109 [U] ❌ 6AZ3_D:67 no longer at interface
1G:121 [ASN] 1A:2316 [G] D:94 [LYS] 2:1101 [A] ❌ 6AZ3_D:94 no longer at interface
1G:79 [ASN] 1A:2322 [A] D:57 [ARG] 2:1107 [A] ❌ 6AZ3_D:57 no longer at interface
1G:152 [LEU] 1A:2317 [A] D:124 [ILE] 2:1102 [A] ❌ 6AZ3_D:124 no longer at interface
1G:82 [LEU] 1A:2323 [A] D:62 [ARG] 2:1108 [A] ❌ 6AZ3_D:62 no longer at interface
1G:90 [LEU] 1A:2324 [U] D:69 [VAL] 2:1109 [U] ❌ 6AZ3_D:69 no longer at interface
1G:77 [ILE] 1A:2322 [A] D:55 [THR] 2:1107 [A] ❌ 6AZ3_D:55 no longer at interface
1G:77 [ILE] 1A:2323 [A] D:55 [THR] 2:1108 [A] ❌ 6AZ3_D:55 no longer at interface
1G:45 [GLU] 1A:2317 [A] D:27 [GLU] 2:1102 [A] ❌ 6AZ3_D:27 no longer at interface
1G:45 [GLU] 1A:2318 [C] D:27 [GLU] 2:1103 [C] ❌ 6AZ3_D:27 no longer at interface
1G:45 [GLU] 1A:2319 [G] D:27 [GLU] 2:1104 [A] ❌ 6AZ3_D:27 no longer at interface
1G:45 [GLU] 1A:2323 [A] D:27 [GLU] 2:1108 [A] ❌ 6AZ3_D:27 no longer at interface
1G:76 [SER] 1A:2324 [U] D:54 [LEU] 2:1109 [U] ❌ 4Y4O_1G:76 no longer at interface
1G:78 [SER] 1A:2323 [A] D:56 [VAL] 2:1108 [A] ❌ 4Y4O_1G:78 no longer at interface
1G:78 [SER] 1A:2322 [A] D:56 [VAL] 2:1107 [A] ❌ 4Y4O_1G:78 no longer at interface
1G:81 [LYS] 1A:2323 [A] D:61 [ILE] 2:1108 [A] ❌ 4Y4O_1G:81 no longer at interface
1G:93 [THR] 1A:2326 [C] D:72 [THR] 2:1111 [U] ❌ 4Y4O_1G:93 no longer at interface
1G:114 [ILE] 1A:2317 [A] D:89 [LYS] 2:1102 [A] ❌ 4Y4O_1G:114 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L5 0.83 2.7 0.27 0.76 0.83 0.77 0.93 0.74 0.68 0.26 0.45


Other pairs involving 4Y4O_1G_1A or 6AZ3_D_2

Total number of entries: 17

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
4Y4O_1G_1A 6AZ3_D_2 0.74 0.83 2.7 0.27 Ribosomal protein L5 compare
4Y4O_1G_1A 7RYG_F_A 0.78 0.96 3.49 0.53 Ribosomal protein L5 Bacterial large subunit ribosomal RNA compare
4Y4O_1G_1A 7ASM_F_A 0.41 0.95 3.56 0.49 Ribosomal protein L5 Bacterial large subunit ribosomal RNA compare
4Y4O_1G_1A 6S0Z_F_A 0.67 0.96 1.7 0.57 Ribosomal protein L5 Bacterial large subunit ribosomal RNA compare
4Y4O_1G_1A 7O7Y_BJ_B5 0.48 0.89 4.25 0.09 Ribosomal protein L5 compare
4Y4O_1G_1A 7K00_f_a 0.92 0.97 1.89 0.55 Ribosomal protein L5 Bacterial large subunit ribosomal RNA compare
6AZ3_D_2 7RYG_F_A 0.53 0.81 3.21 0.21 Ribosomal protein L5 compare
6AZ3_D_2 7K00_f_a 0.79 0.83 2.15 0.24 Ribosomal protein L5 compare
6AZ3_D_2 6S0Z_F_A 0.39 0.82 3.19 0.12 Ribosomal protein L5 compare
6AZ3_D_2 7O7Y_BJ_B5 0.92 0.92 0.74 0.75 Ribosomal protein L5 Eukaryotic large subunit ribosomal RNA compare
6AZ3_D_2 7ASM_F_A 0.36 0.82 3.6 0.06 Ribosomal protein L5 compare
1VQ8_D_0 4Y4O_1G_1A 0.75 0.93 3.28 0.21 Ribosomal protein L5 compare
1VQ8_D_0 6AZ3_D_2 0.50 0.8 2.77 0.21 Ribosomal protein L5 compare
5NS3_A_C 6AZ3_D_2 0.54 0.65 1.87 0.2 Ribosomal protein L5 compare
5NS4_A_C 6AZ3_D_2 0.56 0.67 1.9 0.18 Ribosomal protein L5 compare
1YHQ_D_0 6AZ3_D_2 0.66 0.81 2.69 0.24 Ribosomal protein L5 compare
1YHQ_D_0 4Y4O_1G_1A 0.73 0.93 3.03 0.22 Ribosomal protein L5 compare