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All interfaces > All interologs > Interface groups > group133 > 4Y4O_1G_1A vs 6S0Z_F_A

Interface analysis


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Common contacts -

4Y4O_1G
4Y4O_1A
6S0Z_F
6S0Z_A
Conserved?
1G:75 [LYS] 1A:2324 [U] F:72 [LYS] A:2339 [U] ✔
1G:88 [ILE] 1A:2323 [A] F:85 [ILE] A:2338 [A] ✔
1G:88 [ILE] 1A:2324 [U] F:85 [ILE] A:2339 [U] ✔
1G:128 [ARG] 1A:2327 [G] F:125 [ARG] A:2342 [U] ✔
1G:128 [ARG] 1A:2328 [C] F:125 [ARG] A:2343 [U] ✔
1G:156 [ASP] 1A:2316 [G] F:153 [ASP] A:2331 [G] ✔
1G:156 [ASP] 1A:2317 [A] F:153 [ASP] A:2332 [U] ✔
1G:156 [ASP] 1A:2325 [C] F:153 [ASP] A:2340 [C] ✔
1G:73 [ALA] 1A:2324 [U] F:70 [ALA] A:2339 [U] ✔
1G:36 [LYS] 1A:2326 [C] F:33 [LYS] A:2341 [A] ✔
1G:36 [LYS] 1A:2327 [G] F:33 [LYS] A:2342 [U] ✔
1G:154 [GLY] 1A:2317 [A] F:151 [GLY] A:2332 [U] ✔
1G:79 [ASN] 1A:2322 [A] F:76 [THR] A:2337 [A] ✔
1G:38 [VAL] 1A:2325 [C] F:35 [VAL] A:2340 [C] ✔
1G:38 [VAL] 1A:2326 [C] F:35 [VAL] A:2341 [A] ✔
1G:80 [PHE] 1A:2323 [A] F:77 [PHE] A:2338 [A] ✔
1G:124 [SER] 1A:2315 [G] F:121 [ALA] A:2330 [G] ✔
1G:124 [SER] 1A:2316 [G] F:121 [ALA] A:2331 [G] ✔
1G:41 [GLN] 1A:2317 [A] F:38 [MET] A:2332 [U] ✔
1G:71 [THR] 1A:2324 [U] F:68 [THR] A:2339 [U] ✔
1G:71 [THR] 1A:2325 [C] F:68 [THR] A:2340 [C] ✔
1G:132 [ASN] 1A:2315 [G] F:129 [THR] A:2330 [G] ✔
1G:132 [ASN] 1A:2316 [G] F:129 [THR] A:2331 [G] ✔
1G:125 [PHE] 1A:2314 [G] F:122 [PHE] A:2329 [U] ✔
1G:125 [PHE] 1A:2315 [G] F:122 [PHE] A:2330 [G] ✔
1G:74 [LYS] 1A:2324 [U] F:71 [LYS] A:2339 [U] ✔
1G:40 [ASN] 1A:2325 [C] F:37 [ASN] A:2340 [C] ✔
1G:42 [GLY] 1A:2317 [A] F:39 [GLY] A:2332 [U] ✔
1G:42 [GLY] 1A:2318 [C] F:39 [GLY] A:2333 [U] ✔
1G:42 [GLY] 1A:2324 [U] F:39 [GLY] A:2339 [U] ✔
1G:130 [ASN] 1A:2326 [C] F:127 [ASN] A:2341 [A] ✔
1G:130 [ASN] 1A:2327 [G] F:127 [ASN] A:2342 [U] ✔
1G:126 [ASP] 1A:2314 [G] F:123 [ASP] A:2329 [U] ✔
1G:126 [ASP] 1A:2315 [G] F:123 [ASP] A:2330 [G] ✔
1G:126 [ASP] 1A:2327 [G] F:123 [ASP] A:2342 [U] ✔
1G:91 [ARG] 1A:2325 [C] F:88 [LYS] A:2340 [C] ✔
1G:91 [ARG] 1A:2326 [C] F:88 [LYS] A:2341 [A] ✔
1G:77 [ILE] 1A:2322 [A] F:74 [ILE] A:2337 [A] ✔
1G:77 [ILE] 1A:2323 [A] F:74 [ILE] A:2338 [A] ✔
1G:158 [ALA] 1A:2325 [C] F:155 [VAL] A:2340 [C] ✔
1G:158 [ALA] 1A:2326 [C] F:155 [VAL] A:2341 [A] ✔
1G:134 [GLY] 1A:2316 [G] F:131 [GLY] A:2331 [G] ✔
1G:134 [GLY] 1A:2317 [A] F:131 [GLY] A:2332 [U] ✔
1G:135 [LEU] 1A:2317 [A] F:132 [VAL] A:2332 [U] ✔
1G:133 [LEU] 1A:2316 [G] F:130 [LEU] A:2331 [G] ✔
1G:160 [VAL] 1A:2326 [C] F:157 [VAL] A:2341 [A] ✔
1G:160 [VAL] 1A:2327 [G] F:157 [VAL] A:2342 [U] ✔
1G:89 [GLY] 1A:2324 [U] F:86 [GLY] A:2339 [U] ✔
1G:123 [ASN] 1A:2316 [G] F:120 [LYS] A:2331 [G] ✔
1G:155 [MET] 1A:2317 [A] F:152 [MET] A:2332 [U] ✔
1G:72 [ARG] 1A:2324 [U] F:69 [LYS] A:2339 [U] ✔
1G:43 [LEU] 1A:2317 [A] F:40 [VAL] A:2332 [U] ✔
1G:43 [LEU] 1A:2318 [C] F:40 [VAL] A:2333 [U] ✔
1G:43 [LEU] 1A:2323 [A] F:40 [VAL] A:2338 [A] ✔
1G:75 [LYS] 1A:2322 [A] F:72 [LYS] A:2337 [A] ❌ 6S0Z_F_A
1G:75 [LYS] 1A:2323 [A] F:72 [LYS] A:2338 [A] ❌ 6S0Z_F_A
1G:156 [ASP] 1A:2324 [U] F:153 [ASP] A:2339 [U] ❌ 6S0Z_F_A
1G:73 [ALA] 1A:2323 [A] F:70 [ALA] A:2338 [A] ❌ 6S0Z_F_A
1G:80 [PHE] 1A:2320 [G] F:77 [PHE] A:2335 [G] ❌ 6S0Z_F_A
1G:80 [PHE] 1A:2322 [A] F:77 [PHE] A:2337 [A] ❌ 6S0Z_F_A
1G:41 [GLN] 1A:2324 [U] F:38 [MET] A:2339 [U] ❌ 6S0Z_F_A
1G:132 [ASN] 1A:2314 [G] F:129 [THR] A:2329 [U] ❌ 6S0Z_F_A
1G:132 [ASN] 1A:2325 [C] F:129 [THR] A:2340 [C] ❌ 6S0Z_F_A
1G:132 [ASN] 1A:2326 [C] F:129 [THR] A:2341 [A] ❌ 6S0Z_F_A
1G:40 [ASN] 1A:2316 [G] F:37 [ASN] A:2331 [G] ❌ 6S0Z_F_A
1G:40 [ASN] 1A:2324 [U] F:37 [ASN] A:2339 [U] ❌ 6S0Z_F_A
1G:42 [GLY] 1A:2319 [G] F:39 [GLY] A:2334 [G] ❌ 6S0Z_F_A
1G:42 [GLY] 1A:2323 [A] F:39 [GLY] A:2338 [A] ❌ 6S0Z_F_A
1G:130 [ASN] 1A:2315 [G] F:127 [ASN] A:2330 [G] ❌ 6S0Z_F_A
1G:126 [ASP] 1A:2326 [C] F:123 [ASP] A:2341 [A] ❌ 6S0Z_F_A
1G:123 [ASN] 1A:2315 [G] F:120 [LYS] A:2330 [G] ❌ 6S0Z_F_A
1G:155 [MET] 1A:2316 [G] F:152 [MET] A:2331 [G] ❌ 6S0Z_F_A
1G:43 [LEU] 1A:2319 [G] F:40 [VAL] A:2334 [G] ❌ 6S0Z_F_A
1G:132 [ASN] 1A:2317 [A] F:129 [THR] A:2332 [U] ❌ 4Y4O_1G_1A
1G:133 [LEU] 1A:2317 [A] F:130 [LEU] A:2332 [U] ❌ 4Y4O_1G_1A
1G:156 [ASP] 1A:2319 [G] F:153 [ASP] A:2334 [G] ❌ 4Y4O_1G_1A
1G:156 [ASP] 1A:2315 [G] F:153 [ASP] A:2330 [G] ❌ 4Y4O_1G_1A
1G:158 [ALA] 1A:2315 [G] F:155 [VAL] A:2330 [G] ❌ 4Y4O_1G_1A
1G:43 [LEU] 1A:2324 [U] F:40 [VAL] A:2339 [U] ❌ 4Y4O_1G_1A
1G:43 [LEU] 1A:2320 [G] F:40 [VAL] A:2335 [G] ❌ 4Y4O_1G_1A
1G:74 [LYS] 1A:2325 [C] F:71 [LYS] A:2340 [C] ❌ 4Y4O_1G_1A
1G:77 [ILE] 1A:2324 [U] F:74 [ILE] A:2339 [U] ❌ 4Y4O_1G_1A
1G:79 [ASN] 1A:2323 [A] F:76 [THR] A:2338 [A] ❌ 4Y4O_1G_1A
1G:79 [ASN] 1A:2321 [A] F:76 [THR] A:2336 [A] ❌ 6S0Z_A:2336 no longer at interface
1G:157 [ILE] 1A:2316 [G] F:154 [ILE] A:2331 [G] ❌ 6S0Z_F:154 no longer at interface
1G:39 [ILE] 1A:2325 [C] F:36 [VAL] A:2340 [C] ❌ 6S0Z_F:36 no longer at interface
1G:121 [ASN] 1A:2316 [G] F:118 [SER] A:2331 [G] ❌ 6S0Z_F:118 no longer at interface
1G:127 [GLY] 1A:2314 [G] F:124 [GLY] A:2329 [U] ❌ 6S0Z_F:124 no longer at interface
1G:44 [GLY] 1A:2319 [G] F:41 [GLY] A:2334 [G] ❌ 6S0Z_F:41 no longer at interface
1G:44 [GLY] 1A:2323 [A] F:41 [GLY] A:2338 [A] ❌ 6S0Z_F:41 no longer at interface
1G:152 [LEU] 1A:2317 [A] F:149 [VAL] A:2332 [U] ❌ 6S0Z_F:149 no longer at interface
1G:82 [LEU] 1A:2323 [A] F:79 [LEU] A:2338 [A] ❌ 6S0Z_F:79 no longer at interface
1G:90 [LEU] 1A:2324 [U] F:87 [ALA] A:2339 [U] ❌ 6S0Z_F:87 no longer at interface
1G:153 [ARG] 1A:2317 [A] F:150 [ARG] A:2332 [U] ❌ 6S0Z_F:150 no longer at interface
1G:131 [TYR] 1A:2315 [G] F:128 [TYR] A:2330 [G] ❌ 6S0Z_F:128 no longer at interface
1G:136 [ARG] 1A:2317 [A] F:133 [LYS] A:2332 [U] ❌ 6S0Z_F:133 no longer at interface
1G:45 [GLU] 1A:2317 [A] F:42 [ASP] A:2332 [U] ❌ 6S0Z_F:42 no longer at interface
1G:45 [GLU] 1A:2318 [C] F:42 [ASP] A:2333 [U] ❌ 6S0Z_F:42 no longer at interface
1G:45 [GLU] 1A:2319 [G] F:42 [ASP] A:2334 [G] ❌ 6S0Z_F:42 no longer at interface
1G:45 [GLU] 1A:2323 [A] F:42 [ASP] A:2338 [A] ❌ 6S0Z_F:42 no longer at interface
1G:78 [SER] 1A:2323 [A] F:75 [ALA] A:2338 [A] ❌ 4Y4O_1G:78 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L5 Bacterial large subunit ribosomal RNA 0.96 1.7 0.57 0.91 0.97 0.97 1.0 0.67 0.47 0.21 0.38


Other pairs involving 4Y4O_1G_1A or 6S0Z_F_A

Total number of entries: 15

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
4Y4O_1G_1A 6AZ3_D_2 0.74 0.83 2.7 0.27 Ribosomal protein L5 compare
4Y4O_1G_1A 7RYG_F_A 0.78 0.96 3.49 0.53 Ribosomal protein L5 Bacterial large subunit ribosomal RNA compare
4Y4O_1G_1A 7ASM_F_A 0.41 0.95 3.56 0.49 Ribosomal protein L5 Bacterial large subunit ribosomal RNA compare
4Y4O_1G_1A 6S0Z_F_A 0.67 0.96 1.7 0.57 Ribosomal protein L5 Bacterial large subunit ribosomal RNA compare
4Y4O_1G_1A 7O7Y_BJ_B5 0.48 0.89 4.25 0.09 Ribosomal protein L5 compare
4Y4O_1G_1A 7K00_f_a 0.92 0.97 1.89 0.55 Ribosomal protein L5 Bacterial large subunit ribosomal RNA compare
6AZ3_D_2 6S0Z_F_A 0.39 0.82 3.19 0.12 Ribosomal protein L5 compare
1VQ8_D_0 4Y4O_1G_1A 0.75 0.93 3.28 0.21 Ribosomal protein L5 compare
1VQ8_D_0 6S0Z_F_A 0.67 0.93 3.72 0.29 Ribosomal protein L5 compare
1YHQ_D_0 6S0Z_F_A 0.68 0.93 3.49 0.29 Ribosomal protein L5 compare
1YHQ_D_0 4Y4O_1G_1A 0.73 0.93 3.03 0.22 Ribosomal protein L5 compare
6S0Z_F_A 7K00_f_a 0.59 0.97 2.39 0.52 Ribosomal protein L5 Bacterial large subunit ribosomal RNA compare
6S0Z_F_A 7ASM_F_A 0.57 0.98 2.05 0.88 Ribosomal protein L5 Bacterial large subunit ribosomal RNA compare
6S0Z_F_A 7O7Y_BJ_B5 0.35 0.89 4.72 0.15 Ribosomal protein L5 compare
6S0Z_F_A 7RYG_F_A 0.59 0.97 3.23 0.48 Ribosomal protein L5 Bacterial large subunit ribosomal RNA compare