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All interfaces > All interologs > Interface groups > group133 > 5NS4_A_C vs 6AZ3_D_2

Interface analysis


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Common contacts -

5NS4_A
5NS4_C
6AZ3_D
6AZ3_2
Conserved?
A:128 [ARG] C:30 [C] D:101 [THR] 2:1112 [C] ✔
A:128 [ARG] C:31 [C] D:101 [THR] 2:1113 [A] ✔
A:36 [LYS] C:29 [A] D:18 [LYS] 2:1111 [U] ✔
A:36 [LYS] C:30 [C] D:18 [LYS] 2:1112 [C] ✔
A:38 [VAL] C:28 [C] D:20 [CYS] 2:1110 [C] ✔
A:38 [VAL] C:29 [A] D:20 [CYS] 2:1111 [U] ✔
A:71 [THR] C:28 [C] D:50 [SER] 2:1110 [C] ✔
A:40 [ASN] C:27 [G] D:22 [ASN] 2:1109 [U] ✔
A:40 [ASN] C:28 [C] D:22 [ASN] 2:1110 [C] ✔
A:130 [ASN] C:29 [A] D:103 [SER] 2:1111 [U] ✔
A:91 [ARG] C:28 [C] D:70 [HIS] 2:1110 [C] ✔
A:91 [ARG] C:29 [A] D:70 [HIS] 2:1111 [U] ✔
A:158 [ALA] C:29 [A] D:130 [TYR] 2:1111 [U] ✔
A:160 [VAL] C:29 [A] D:132 [VAL] 2:1111 [U] ✔
A:160 [VAL] C:30 [C] D:132 [VAL] 2:1112 [C] ✔
A:128 [ARG] C:32 [U] D:101 [THR] 2:1114 [C] ❌ 6AZ3_D_2
A:156 [ASP] C:27 [G] D:128 [ASP] 2:1109 [U] ❌ 6AZ3_D_2
A:156 [ASP] C:28 [C] D:128 [ASP] 2:1110 [C] ❌ 6AZ3_D_2
A:132 [ASN] C:29 [A] D:105 [GLY] 2:1111 [U] ❌ 6AZ3_D_2
A:130 [ASN] C:30 [C] D:103 [SER] 2:1112 [C] ❌ 6AZ3_D_2
A:126 [ASP] C:29 [A] D:99 [SER] 2:1111 [U] ❌ 6AZ3_D_2
A:126 [ASP] C:30 [C] D:99 [SER] 2:1112 [C] ❌ 6AZ3_D_2
A:71 [THR] C:27 [G] D:50 [SER] 2:1109 [U] ❌ 5NS4_A_C
A:42 [GLY] C:26 [U] D:24 [CYS] 2:1108 [A] ❌ 5NS4_A:42, 5NS4_C:26 no longer at interface
A:88 [ILE] C:27 [G] D:67 [ILE] 2:1109 [U] ❌ 6AZ3_D:67 no longer at interface
A:41 [GLN] C:27 [G] D:23 [ILE] 2:1109 [U] ❌ 5NS4_A:41 no longer at interface
A:42 [GLY] C:27 [G] D:24 [CYS] 2:1109 [U] ❌ 5NS4_A:42 no longer at interface
A:72 [ARG] C:27 [G] D:51 [ARG] 2:1109 [U] ❌ 5NS4_A:72 no longer at interface
A:73 [ALA] C:27 [G] D:52 [ALA] 2:1109 [U] ❌ 5NS4_A:73 no longer at interface
A:89 [GLY] C:27 [G] D:68 [ALA] 2:1109 [U] ❌ 5NS4_A:89 no longer at interface
A:93 [THR] C:29 [A] D:72 [THR] 2:1111 [U] ❌ 5NS4_A:93 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L5 0.67 1.9 0.18 0.73 0.24 0.91 0.55 0.56 0.48 0.29 0.50


Other pairs involving 5NS4_A_C or 6AZ3_D_2

Total number of entries: 15

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1MJI_A_C 5NS4_A_C 0.94 0.98 0.49 0.82 Ribosomal protein L5 compare
1VQ8_D_0 5NS4_A_C 0.72 0.64 1.29 0.09 Ribosomal protein L5 compare
1VQ8_D_0 6AZ3_D_2 0.50 0.8 2.77 0.21 Ribosomal protein L5 compare
1YHQ_D_0 5NS4_A_C 0.72 0.65 1.31 0.09 Ribosomal protein L5 compare
1YHQ_D_0 6AZ3_D_2 0.66 0.81 2.69 0.24 Ribosomal protein L5 compare
4Y4O_1G_1A 6AZ3_D_2 0.74 0.83 2.7 0.27 Ribosomal protein L5 compare
5NS3_A_C 5NS4_A_C 0.99 0.97 0.23 0.9 Ribosomal protein L5 compare
5NS3_A_C 6AZ3_D_2 0.54 0.65 1.87 0.2 Ribosomal protein L5 compare
5NS4_A_C 6AZ3_D_2 0.56 0.67 1.9 0.18 Ribosomal protein L5 compare
5NS4_A_C 7O7Y_BJ_B5 0.64 0.68 1.95 0.27 Ribosomal protein L5 compare
6AZ3_D_2 7RYG_F_A 0.53 0.81 3.21 0.21 Ribosomal protein L5 compare
6AZ3_D_2 7K00_f_a 0.79 0.83 2.15 0.24 Ribosomal protein L5 compare
6AZ3_D_2 6S0Z_F_A 0.39 0.82 3.19 0.12 Ribosomal protein L5 compare
6AZ3_D_2 7O7Y_BJ_B5 0.92 0.92 0.74 0.75 Ribosomal protein L5 Eukaryotic large subunit ribosomal RNA compare
6AZ3_D_2 7ASM_F_A 0.36 0.82 3.6 0.06 Ribosomal protein L5 compare