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All interfaces > All interologs > Interface groups > group133 > 6AZ3_D_2 vs 6S0Z_F_A

Interface analysis


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Common contacts -

6AZ3_D
6AZ3_2
6S0Z_F
6S0Z_A
Conserved?
D:23 [ILE] 2:1109 [U] F:39 [GLY] A:2339 [U] ✔
D:107 [GLY] 2:1101 [A] F:131 [GLY] A:2331 [G] ✔
D:107 [GLY] 2:1102 [A] F:131 [GLY] A:2332 [U] ✔
D:108 [ILE] 2:1102 [A] F:132 [VAL] A:2332 [U] ✔
D:52 [ALA] 2:1109 [U] F:70 [ALA] A:2339 [U] ✔
D:99 [SER] 2:1099 [G] F:123 [ASP] A:2329 [U] ✔
D:99 [SER] 2:1100 [G] F:123 [ASP] A:2330 [G] ✔
D:51 [ARG] 2:1109 [U] F:69 [LYS] A:2339 [U] ✔
D:53 [ARG] 2:1109 [U] F:72 [LYS] A:2339 [U] ✔
D:128 [ASP] 2:1102 [A] F:152 [MET] A:2332 [U] ✔
D:101 [THR] 2:1112 [C] F:125 [ARG] A:2342 [U] ✔
D:101 [THR] 2:1113 [A] F:125 [ARG] A:2343 [U] ✔
D:127 [MET] 2:1102 [A] F:151 [GLY] A:2332 [U] ✔
D:56 [VAL] 2:1108 [A] F:75 [ALA] A:2338 [A] ✔
D:106 [PHE] 2:1101 [A] F:130 [LEU] A:2331 [G] ✔
D:106 [PHE] 2:1102 [A] F:130 [LEU] A:2332 [U] ✔
D:59 [PHE] 2:1108 [A] F:77 [PHE] A:2338 [A] ✔
D:50 [SER] 2:1109 [U] F:68 [THR] A:2339 [U] ✔
D:50 [SER] 2:1110 [C] F:68 [THR] A:2340 [C] ✔
D:97 [ASN] 2:1100 [G] F:121 [ALA] A:2330 [G] ✔
D:97 [ASN] 2:1101 [A] F:121 [ALA] A:2331 [G] ✔
D:98 [PHE] 2:1100 [G] F:122 [PHE] A:2330 [G] ✔
D:24 [CYS] 2:1103 [C] F:40 [VAL] A:2333 [U] ✔
D:24 [CYS] 2:1108 [A] F:40 [VAL] A:2338 [A] ✔
D:24 [CYS] 2:1109 [U] F:40 [VAL] A:2339 [U] ✔
D:105 [GLY] 2:1100 [G] F:129 [THR] A:2330 [G] ✔
D:105 [GLY] 2:1101 [A] F:129 [THR] A:2331 [G] ✔
D:68 [ALA] 2:1109 [U] F:86 [GLY] A:2339 [U] ✔
D:96 [TYR] 2:1101 [A] F:120 [LYS] A:2331 [G] ✔
D:103 [SER] 2:1111 [U] F:127 [ASN] A:2341 [A] ✔
D:129 [PHE] 2:1101 [A] F:153 [ASP] A:2331 [G] ✔
D:70 [HIS] 2:1110 [C] F:88 [LYS] A:2340 [C] ✔
D:70 [HIS] 2:1111 [U] F:88 [LYS] A:2341 [A] ✔
D:53 [ARG] 2:1110 [C] F:72 [LYS] A:2340 [C] ❌ 6S0Z_F_A
D:128 [ASP] 2:1101 [A] F:152 [MET] A:2331 [G] ❌ 6S0Z_F_A
D:101 [THR] 2:1099 [G] F:125 [ARG] A:2329 [U] ❌ 6S0Z_F_A
D:56 [VAL] 2:1107 [A] F:75 [ALA] A:2337 [A] ❌ 6S0Z_F_A
D:59 [PHE] 2:1105 [G] F:77 [PHE] A:2335 [G] ❌ 6S0Z_F_A
D:59 [PHE] 2:1107 [A] F:77 [PHE] A:2337 [A] ❌ 6S0Z_F_A
D:97 [ASN] 2:1102 [A] F:121 [ALA] A:2332 [U] ❌ 6S0Z_F_A
D:22 [ASN] 2:1101 [A] F:38 [MET] A:2331 [G] ❌ 6S0Z_F_A
D:22 [ASN] 2:1109 [U] F:38 [MET] A:2339 [U] ❌ 6S0Z_F_A
D:22 [ASN] 2:1110 [C] F:38 [MET] A:2340 [C] ❌ 6S0Z_F_A
D:24 [CYS] 2:1104 [A] F:40 [VAL] A:2334 [G] ❌ 6S0Z_F_A
D:96 [TYR] 2:1100 [G] F:120 [LYS] A:2330 [G] ❌ 6S0Z_F_A
D:103 [SER] 2:1099 [G] F:127 [ASN] A:2329 [U] ❌ 6S0Z_F_A
D:103 [SER] 2:1100 [G] F:127 [ASN] A:2330 [G] ❌ 6S0Z_F_A
D:98 [PHE] 2:1099 [G] F:122 [PHE] A:2329 [U] ❌ 6AZ3_D_2
D:99 [SER] 2:1112 [C] F:123 [ASP] A:2342 [U] ❌ 6AZ3_D_2
D:103 [SER] 2:1112 [C] F:127 [ASN] A:2342 [U] ❌ 6AZ3_D_2
D:105 [GLY] 2:1102 [A] F:129 [THR] A:2332 [U] ❌ 6AZ3_D_2
D:129 [PHE] 2:1104 [A] F:153 [ASP] A:2334 [G] ❌ 6AZ3_D_2
D:129 [PHE] 2:1100 [G] F:153 [ASP] A:2330 [G] ❌ 6AZ3_D_2
D:129 [PHE] 2:1102 [A] F:153 [ASP] A:2332 [U] ❌ 6AZ3_D_2
D:129 [PHE] 2:1110 [C] F:153 [ASP] A:2340 [C] ❌ 6AZ3_D_2
D:22 [ASN] 2:1102 [A] F:38 [MET] A:2332 [U] ❌ 6AZ3_D_2
D:23 [ILE] 2:1102 [A] F:39 [GLY] A:2332 [U] ❌ 6AZ3_D_2
D:23 [ILE] 2:1103 [C] F:39 [GLY] A:2333 [U] ❌ 6AZ3_D_2
D:24 [CYS] 2:1102 [A] F:40 [VAL] A:2332 [U] ❌ 6AZ3_D_2
D:24 [CYS] 2:1105 [G] F:40 [VAL] A:2335 [G] ❌ 6AZ3_D_2
D:101 [THR] 2:1098 [G] F:125 [ARG] A:2328 [A] ❌ 6S0Z_A:2328 no longer at interface
D:126 [GLY] 2:1102 [A] F:150 [ARG] A:2332 [U] ❌ 6S0Z_F:150 no longer at interface
D:61 [ILE] 2:1108 [A] F:78 [ARG] A:2338 [A] ❌ 6S0Z_F:78 no longer at interface
D:132 [VAL] 2:1111 [U] F:156 [ILE] A:2341 [A] ❌ 6S0Z_F:156 no longer at interface
D:132 [VAL] 2:1112 [C] F:156 [ILE] A:2342 [U] ❌ 6S0Z_F:156 no longer at interface
D:130 [TYR] 2:1099 [G] F:154 [ILE] A:2329 [U] ❌ 6S0Z_F:154 no longer at interface
D:130 [TYR] 2:1100 [G] F:154 [ILE] A:2330 [G] ❌ 6S0Z_F:154 no longer at interface
D:130 [TYR] 2:1101 [A] F:154 [ILE] A:2331 [G] ❌ 6S0Z_F:154 no longer at interface
D:130 [TYR] 2:1111 [U] F:154 [ILE] A:2341 [A] ❌ 6S0Z_F:154 no longer at interface
D:20 [CYS] 2:1110 [C] F:36 [VAL] A:2340 [C] ❌ 6S0Z_F:36 no longer at interface
D:20 [CYS] 2:1111 [U] F:36 [VAL] A:2341 [A] ❌ 6S0Z_F:36 no longer at interface
D:25 [VAL] 2:1104 [A] F:41 [GLY] A:2334 [G] ❌ 6S0Z_F:41 no longer at interface
D:125 [TYR] 2:1102 [A] F:149 [VAL] A:2332 [U] ❌ 6S0Z_F:149 no longer at interface
D:100 [ASP] 2:1099 [G] F:124 [GLY] A:2329 [U] ❌ 6S0Z_F:124 no longer at interface
D:104 [PHE] 2:1100 [G] F:128 [TYR] A:2330 [G] ❌ 6S0Z_F:128 no longer at interface
D:18 [LYS] 2:1111 [U] F:34 [ILE] A:2341 [A] ❌ 6S0Z_F:34 no longer at interface
D:18 [LYS] 2:1112 [C] F:34 [ILE] A:2342 [U] ❌ 6S0Z_F:34 no longer at interface
D:26 [GLY] 2:1104 [A] F:42 [ASP] A:2334 [G] ❌ 6S0Z_F:42 no longer at interface
D:26 [GLY] 2:1108 [A] F:42 [ASP] A:2338 [A] ❌ 6S0Z_F:42 no longer at interface
D:72 [THR] 2:1111 [U] F:90 [THR] A:2341 [A] ❌ 6S0Z_F:90 no longer at interface
D:89 [LYS] 2:1102 [A] F:108 [LEU] A:2332 [U] ❌ 6S0Z_F:108 no longer at interface
D:54 [LEU] 2:1109 [U] F:73 [SER] A:2339 [U] ❌ 6S0Z_F:73 no longer at interface
D:109 [ASP] 2:1102 [A] F:133 [LYS] A:2332 [U] ❌ 6S0Z_F:133 no longer at interface
D:131 [VAL] 2:1111 [U] F:155 [VAL] A:2341 [A] ❌ 6AZ3_D:131 no longer at interface
D:131 [VAL] 2:1100 [G] F:155 [VAL] A:2330 [G] ❌ 6AZ3_D:131 no longer at interface
D:131 [VAL] 2:1110 [C] F:155 [VAL] A:2340 [C] ❌ 6AZ3_D:131 no longer at interface
D:133 [LEU] 2:1111 [U] F:157 [VAL] A:2341 [A] ❌ 6AZ3_D:133 no longer at interface
D:133 [LEU] 2:1112 [C] F:157 [VAL] A:2342 [U] ❌ 6AZ3_D:133 no longer at interface
D:17 [LYS] 2:1111 [U] F:33 [LYS] A:2341 [A] ❌ 6AZ3_D:17 no longer at interface
D:17 [LYS] 2:1112 [C] F:33 [LYS] A:2342 [U] ❌ 6AZ3_D:17 no longer at interface
D:19 [LEU] 2:1111 [U] F:35 [VAL] A:2341 [A] ❌ 6AZ3_D:19 no longer at interface
D:19 [LEU] 2:1110 [C] F:35 [VAL] A:2340 [C] ❌ 6AZ3_D:19 no longer at interface
D:21 [ILE] 2:1110 [C] F:37 [ASN] A:2340 [C] ❌ 6AZ3_D:21 no longer at interface
D:55 [THR] 2:1107 [A] F:74 [ILE] A:2337 [A] ❌ 6AZ3_D:55 no longer at interface
D:55 [THR] 2:1108 [A] F:74 [ILE] A:2338 [A] ❌ 6AZ3_D:55 no longer at interface
D:55 [THR] 2:1109 [U] F:74 [ILE] A:2339 [U] ❌ 6AZ3_D:55 no longer at interface
D:57 [ARG] 2:1107 [A] F:76 [THR] A:2337 [A] ❌ 6AZ3_D:57 no longer at interface
D:57 [ARG] 2:1108 [A] F:76 [THR] A:2338 [A] ❌ 6AZ3_D:57 no longer at interface
D:67 [ILE] 2:1108 [A] F:85 [ILE] A:2338 [A] ❌ 6AZ3_D:67 no longer at interface
D:67 [ILE] 2:1109 [U] F:85 [ILE] A:2339 [U] ❌ 6AZ3_D:67 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L5 0.82 3.19 0.12 0.73 0.82 0.73 1.0 0.39 0.24 0.12 0.60


Other pairs involving 6AZ3_D_2 or 6S0Z_F_A

Total number of entries: 17

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
4Y4O_1G_1A 6AZ3_D_2 0.74 0.83 2.7 0.27 Ribosomal protein L5 compare
4Y4O_1G_1A 6S0Z_F_A 0.67 0.96 1.7 0.57 Ribosomal protein L5 Bacterial large subunit ribosomal RNA compare
6AZ3_D_2 7RYG_F_A 0.53 0.81 3.21 0.21 Ribosomal protein L5 compare
6AZ3_D_2 7K00_f_a 0.79 0.83 2.15 0.24 Ribosomal protein L5 compare
6AZ3_D_2 6S0Z_F_A 0.39 0.82 3.19 0.12 Ribosomal protein L5 compare
6AZ3_D_2 7O7Y_BJ_B5 0.92 0.92 0.74 0.75 Ribosomal protein L5 Eukaryotic large subunit ribosomal RNA compare
6AZ3_D_2 7ASM_F_A 0.36 0.82 3.6 0.06 Ribosomal protein L5 compare
1VQ8_D_0 6S0Z_F_A 0.67 0.93 3.72 0.29 Ribosomal protein L5 compare
1VQ8_D_0 6AZ3_D_2 0.50 0.8 2.77 0.21 Ribosomal protein L5 compare
5NS3_A_C 6AZ3_D_2 0.54 0.65 1.87 0.2 Ribosomal protein L5 compare
5NS4_A_C 6AZ3_D_2 0.56 0.67 1.9 0.18 Ribosomal protein L5 compare
1YHQ_D_0 6AZ3_D_2 0.66 0.81 2.69 0.24 Ribosomal protein L5 compare
1YHQ_D_0 6S0Z_F_A 0.68 0.93 3.49 0.29 Ribosomal protein L5 compare
6S0Z_F_A 7K00_f_a 0.59 0.97 2.39 0.52 Ribosomal protein L5 Bacterial large subunit ribosomal RNA compare
6S0Z_F_A 7ASM_F_A 0.57 0.98 2.05 0.88 Ribosomal protein L5 Bacterial large subunit ribosomal RNA compare
6S0Z_F_A 7O7Y_BJ_B5 0.35 0.89 4.72 0.15 Ribosomal protein L5 compare
6S0Z_F_A 7RYG_F_A 0.59 0.97 3.23 0.48 Ribosomal protein L5 Bacterial large subunit ribosomal RNA compare