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All interfaces > All interologs > Interface groups > group133 > 6AZ3_D_2 vs 7K00_f_a

Interface analysis


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Common contacts -

6AZ3_D
6AZ3_2
7K00_f
7K00_a
Conserved?
D:126 [GLY] 2:1102 [A] f:151 [GLY] a:2305 [U] ✔
D:23 [ILE] 2:1109 [U] f:38 [MET] a:2312 [U] ✔
D:107 [GLY] 2:1101 [A] f:131 [GLY] a:2304 [G] ✔
D:107 [GLY] 2:1102 [A] f:131 [GLY] a:2305 [U] ✔
D:108 [ILE] 2:1102 [A] f:132 [VAL] a:2305 [U] ✔
D:52 [ALA] 2:1109 [U] f:70 [ALA] a:2312 [U] ✔
D:132 [VAL] 2:1111 [U] f:157 [THR] a:2314 [A] ✔
D:132 [VAL] 2:1112 [C] f:157 [THR] a:2315 [G] ✔
D:130 [TYR] 2:1100 [G] f:155 [THR] a:2303 [G] ✔
D:130 [TYR] 2:1111 [U] f:155 [THR] a:2314 [A] ✔
D:99 [SER] 2:1099 [G] f:123 [ASP] a:2302 [U] ✔
D:99 [SER] 2:1100 [G] f:123 [ASP] a:2303 [G] ✔
D:20 [CYS] 2:1110 [C] f:35 [THR] a:2313 [C] ✔
D:20 [CYS] 2:1111 [U] f:35 [THR] a:2314 [A] ✔
D:51 [ARG] 2:1109 [U] f:69 [LYS] a:2312 [U] ✔
D:53 [ARG] 2:1109 [U] f:72 [LYS] a:2312 [U] ✔
D:128 [ASP] 2:1101 [A] f:153 [ASP] a:2304 [G] ✔
D:128 [ASP] 2:1102 [A] f:153 [ASP] a:2305 [U] ✔
D:101 [THR] 2:1112 [C] f:125 [ARG] a:2315 [G] ✔
D:101 [THR] 2:1113 [A] f:125 [ARG] a:2316 [G] ✔
D:25 [VAL] 2:1104 [A] f:40 [VAL] a:2307 [G] ✔
D:125 [TYR] 2:1102 [A] f:150 [ARG] a:2305 [U] ✔
D:127 [MET] 2:1102 [A] f:152 [LEU] a:2305 [U] ✔
D:100 [ASP] 2:1099 [G] f:124 [GLY] a:2302 [U] ✔
D:106 [PHE] 2:1101 [A] f:130 [MET] a:2304 [G] ✔
D:106 [PHE] 2:1102 [A] f:130 [MET] a:2305 [U] ✔
D:59 [PHE] 2:1105 [G] f:77 [PHE] a:2308 [G] ✔
D:59 [PHE] 2:1107 [A] f:77 [PHE] a:2310 [C] ✔
D:59 [PHE] 2:1108 [A] f:77 [PHE] a:2311 [A] ✔
D:50 [SER] 2:1109 [U] f:68 [THR] a:2312 [U] ✔
D:50 [SER] 2:1110 [C] f:68 [THR] a:2313 [C] ✔
D:18 [LYS] 2:1111 [U] f:33 [LYS] a:2314 [A] ✔
D:18 [LYS] 2:1112 [C] f:33 [LYS] a:2315 [G] ✔
D:97 [ASN] 2:1100 [G] f:121 [SER] a:2303 [G] ✔
D:97 [ASN] 2:1101 [A] f:121 [SER] a:2304 [G] ✔
D:22 [ASN] 2:1101 [A] f:37 [ASN] a:2304 [G] ✔
D:22 [ASN] 2:1109 [U] f:37 [ASN] a:2312 [U] ✔
D:22 [ASN] 2:1110 [C] f:37 [ASN] a:2313 [C] ✔
D:26 [GLY] 2:1104 [A] f:41 [GLY] a:2307 [G] ✔
D:26 [GLY] 2:1108 [A] f:41 [GLY] a:2311 [A] ✔
D:98 [PHE] 2:1100 [G] f:122 [PHE] a:2303 [G] ✔
D:24 [CYS] 2:1103 [C] f:39 [GLY] a:2306 [C] ✔
D:24 [CYS] 2:1104 [A] f:39 [GLY] a:2307 [G] ✔
D:24 [CYS] 2:1109 [U] f:39 [GLY] a:2312 [U] ✔
D:105 [GLY] 2:1100 [G] f:129 [SER] a:2303 [G] ✔
D:105 [GLY] 2:1101 [A] f:129 [SER] a:2304 [G] ✔
D:68 [ALA] 2:1109 [U] f:86 [GLY] a:2312 [U] ✔
D:96 [TYR] 2:1100 [G] f:120 [LYS] a:2303 [G] ✔
D:96 [TYR] 2:1101 [A] f:120 [LYS] a:2304 [G] ✔
D:103 [SER] 2:1100 [G] f:127 [ASN] a:2303 [G] ✔
D:103 [SER] 2:1111 [U] f:127 [ASN] a:2314 [A] ✔
D:129 [PHE] 2:1101 [A] f:154 [ILE] a:2304 [G] ✔
D:109 [ASP] 2:1102 [A] f:133 [ARG] a:2305 [U] ✔
D:70 [HIS] 2:1110 [C] f:88 [LYS] a:2313 [C] ✔
D:70 [HIS] 2:1111 [U] f:88 [LYS] a:2314 [A] ✔
D:130 [TYR] 2:1099 [G] f:155 [THR] a:2302 [U] ❌ 7K00_f_a
D:130 [TYR] 2:1101 [A] f:155 [THR] a:2304 [G] ❌ 7K00_f_a
D:53 [ARG] 2:1110 [C] f:72 [LYS] a:2313 [C] ❌ 7K00_f_a
D:101 [THR] 2:1099 [G] f:125 [ARG] a:2302 [U] ❌ 7K00_f_a
D:97 [ASN] 2:1102 [A] f:121 [SER] a:2305 [U] ❌ 7K00_f_a
D:24 [CYS] 2:1108 [A] f:39 [GLY] a:2311 [A] ❌ 7K00_f_a
D:103 [SER] 2:1099 [G] f:127 [ASN] a:2302 [U] ❌ 7K00_f_a
D:98 [PHE] 2:1099 [G] f:122 [PHE] a:2302 [U] ❌ 6AZ3_D_2
D:99 [SER] 2:1112 [C] f:123 [ASP] a:2315 [G] ❌ 6AZ3_D_2
D:99 [SER] 2:1111 [U] f:123 [ASP] a:2314 [A] ❌ 6AZ3_D_2
D:103 [SER] 2:1112 [C] f:127 [ASN] a:2315 [G] ❌ 6AZ3_D_2
D:128 [ASP] 2:1110 [C] f:153 [ASP] a:2313 [C] ❌ 6AZ3_D_2
D:128 [ASP] 2:1109 [U] f:153 [ASP] a:2312 [U] ❌ 6AZ3_D_2
D:130 [TYR] 2:1110 [C] f:155 [THR] a:2313 [C] ❌ 6AZ3_D_2
D:22 [ASN] 2:1102 [A] f:37 [ASN] a:2305 [U] ❌ 6AZ3_D_2
D:23 [ILE] 2:1102 [A] f:38 [MET] a:2305 [U] ❌ 6AZ3_D_2
D:24 [CYS] 2:1102 [A] f:39 [GLY] a:2305 [U] ❌ 6AZ3_D_2
D:52 [ALA] 2:1108 [A] f:70 [ALA] a:2311 [A] ❌ 6AZ3_D_2
D:101 [THR] 2:1098 [G] f:125 [ARG] a:2301 [C] ❌ 7K00_a:2301 no longer at interface
D:53 [ARG] 2:1097 [U] f:72 [LYS] a:2300 [C] ❌ 6AZ3_2:1097 no longer at interface
D:53 [ARG] 2:1096 [G] f:72 [LYS] a:2299 [U] ❌ 6AZ3_2:1096 no longer at interface
D:53 [ARG] 2:1095 [A] f:72 [LYS] a:2298 [A] ❌ 6AZ3_2:1095 no longer at interface
D:57 [ARG] 2:1106 [A] f:76 [GLY] a:2309 [A] ❌ 6AZ3_D:57, 6AZ3_2:1106 no longer at interface
D:61 [ILE] 2:1108 [A] f:78 [LYS] a:2311 [A] ❌ 7K00_f:78 no longer at interface
D:56 [VAL] 2:1107 [A] f:75 [ALA] a:2310 [C] ❌ 7K00_f:75 no longer at interface
D:56 [VAL] 2:1108 [A] f:75 [ALA] a:2311 [A] ❌ 7K00_f:75 no longer at interface
D:104 [PHE] 2:1100 [G] f:128 [TYR] a:2303 [G] ❌ 7K00_f:128 no longer at interface
D:72 [THR] 2:1111 [U] f:90 [THR] a:2314 [A] ❌ 7K00_f:90 no longer at interface
D:89 [LYS] 2:1102 [A] f:111 [ILE] a:2305 [U] ❌ 7K00_f:111 no longer at interface
D:54 [LEU] 2:1109 [U] f:73 [SER] a:2312 [U] ❌ 7K00_f:73 no longer at interface
D:17 [LYS] 2:1112 [C] f:32 [GLU] a:2315 [G] ❌ 6AZ3_D:17 no longer at interface
D:27 [GLU] 2:1108 [A] f:42 [GLU] a:2311 [A] ❌ 6AZ3_D:27 no longer at interface
D:27 [GLU] 2:1103 [C] f:42 [GLU] a:2306 [C] ❌ 6AZ3_D:27 no longer at interface
D:27 [GLU] 2:1104 [A] f:42 [GLU] a:2307 [G] ❌ 6AZ3_D:27 no longer at interface
D:55 [THR] 2:1108 [A] f:74 [VAL] a:2311 [A] ❌ 6AZ3_D:55 no longer at interface
D:55 [THR] 2:1107 [A] f:74 [VAL] a:2310 [C] ❌ 6AZ3_D:55 no longer at interface
D:57 [ARG] 2:1107 [A] f:76 [GLY] a:2310 [C] ❌ 6AZ3_D:57 no longer at interface
D:62 [ARG] 2:1108 [A] f:79 [ILE] a:2311 [A] ❌ 6AZ3_D:62 no longer at interface
D:67 [ILE] 2:1108 [A] f:85 [ILE] a:2311 [A] ❌ 6AZ3_D:67 no longer at interface
D:67 [ILE] 2:1109 [U] f:85 [ILE] a:2312 [U] ❌ 6AZ3_D:67 no longer at interface
D:69 [VAL] 2:1109 [U] f:87 [CYS] a:2312 [U] ❌ 6AZ3_D:69 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L5 0.83 2.15 0.24 0.75 0.83 0.79 0.78 0.79 0.69 0.20 0.56


Other pairs involving 6AZ3_D_2 or 7K00_f_a

Total number of entries: 17

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
4Y4O_1G_1A 6AZ3_D_2 0.74 0.83 2.7 0.27 Ribosomal protein L5 compare
1VQ8_D_0 6AZ3_D_2 0.50 0.8 2.77 0.21 Ribosomal protein L5 compare
5NS3_A_C 6AZ3_D_2 0.54 0.65 1.87 0.2 Ribosomal protein L5 compare
5NS4_A_C 6AZ3_D_2 0.56 0.67 1.9 0.18 Ribosomal protein L5 compare
1YHQ_D_0 6AZ3_D_2 0.66 0.81 2.69 0.24 Ribosomal protein L5 compare
6AZ3_D_2 6S0Z_F_A 0.39 0.82 3.19 0.12 Ribosomal protein L5 compare
6AZ3_D_2 7ASM_F_A 0.36 0.82 3.6 0.06 Ribosomal protein L5 compare
4Y4O_1G_1A 7K00_f_a 0.92 0.97 1.89 0.55 Ribosomal protein L5 Bacterial large subunit ribosomal RNA compare
7ASM_F_A 7K00_f_a 0.34 0.96 3.21 0.11 Ribosomal protein L5 Bacterial large subunit ribosomal RNA compare
6AZ3_D_2 7K00_f_a 0.79 0.83 2.15 0.24 Ribosomal protein L5 compare
1VQ8_D_0 7K00_f_a 0.35 0.9 3.47 0.08 Ribosomal protein L5 compare
1YHQ_D_0 7K00_f_a 0.40 0.9 3.5 0.14 Ribosomal protein L5 compare
6S0Z_F_A 7K00_f_a 0.59 0.97 2.39 0.52 Ribosomal protein L5 Bacterial large subunit ribosomal RNA compare
6AZ3_D_2 7O7Y_BJ_B5 0.92 0.92 0.74 0.75 Ribosomal protein L5 Eukaryotic large subunit ribosomal RNA compare
7K00_f_a 7O7Y_BJ_B5 0.84 0.89 3.13 0.33 Ribosomal protein L5 compare
6AZ3_D_2 7RYG_F_A 0.53 0.81 3.21 0.21 Ribosomal protein L5 compare
7K00_f_a 7RYG_F_A 0.83 0.99 3.23 0.76 Ribosomal protein L5 Bacterial large subunit ribosomal RNA compare