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All interfaces > All interologs > Interface groups > group133 > 6S0Z_F_A vs 7O7Y_BJ_B5

Interface analysis


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Licorice
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Common contacts -

6S0Z_F
6S0Z_A
7O7Y_BJ
7O7Y_B5
Conserved?
F:153 [ASP] A:2331 [G] BJ:130 [PHE] B5:3996 [G] ✔
F:38 [MET] A:2332 [U] BJ:23 [ASN] B5:3997 [A] ✔
F:131 [GLY] A:2331 [G] BJ:107 [PHE] B5:3996 [G] ✔
F:131 [GLY] A:2332 [U] BJ:107 [PHE] B5:3997 [A] ✔
F:132 [VAL] A:2332 [U] BJ:108 [GLY] B5:3997 [A] ✔
F:37 [ASN] A:2340 [C] BJ:22 [LEU] B5:4005 [C] ✔
F:69 [LYS] A:2339 [U] BJ:52 [LYS] B5:4004 [C] ✔
F:129 [THR] A:2330 [G] BJ:105 [PHE] B5:3995 [G] ✔
F:68 [THR] A:2339 [U] BJ:51 [SER] B5:4004 [C] ✔
F:68 [THR] A:2340 [C] BJ:51 [SER] B5:4005 [C] ✔
F:85 [ILE] A:2338 [A] BJ:68 [ILE] B5:4003 [A] ✔
F:85 [ILE] A:2339 [U] BJ:68 [ILE] B5:4004 [C] ✔
F:72 [LYS] A:2339 [U] BJ:54 [ARG] B5:4004 [C] ✔
F:77 [PHE] A:2338 [A] BJ:60 [PHE] B5:4003 [A] ✔
F:123 [ASP] A:2329 [U] BJ:101 [ASP] B5:3994 [A] ✔
F:40 [VAL] A:2332 [U] BJ:25 [CYS] B5:3997 [A] ✔
F:40 [VAL] A:2333 [U] BJ:25 [CYS] B5:3998 [C] ✔
F:40 [VAL] A:2338 [A] BJ:25 [CYS] B5:4003 [A] ✔
F:40 [VAL] A:2339 [U] BJ:25 [CYS] B5:4004 [C] ✔
F:70 [ALA] A:2339 [U] BJ:53 [ALA] B5:4004 [C] ✔
F:130 [LEU] A:2331 [G] BJ:106 [GLY] B5:3996 [G] ✔
F:39 [GLY] A:2332 [U] BJ:24 [ILE] B5:3997 [A] ✔
F:151 [GLY] A:2332 [U] BJ:128 [LEU] B5:3997 [A] ✔
F:121 [ALA] A:2330 [G] BJ:99 [PHE] B5:3995 [G] ✔
F:120 [LYS] A:2331 [G] BJ:98 [ASN] B5:3996 [G] ✔
F:75 [ALA] A:2338 [A] BJ:57 [VAL] B5:4003 [A] ✔
F:122 [PHE] A:2329 [U] BJ:100 [SER] B5:3994 [A] ✔
F:122 [PHE] A:2330 [G] BJ:100 [SER] B5:3995 [G] ✔
F:125 [ARG] A:2342 [U] BJ:102 [THR] B5:4007 [C] ✔
F:125 [ARG] A:2343 [U] BJ:102 [THR] B5:4008 [C] ✔
F:86 [GLY] A:2339 [U] BJ:69 [ALA] B5:4004 [C] ✔
F:152 [MET] A:2332 [U] BJ:129 [ASP] B5:3997 [A] ✔
F:153 [ASP] A:2330 [G] BJ:130 [PHE] B5:3995 [G] ❌ 7O7Y_BJ_B5
F:153 [ASP] A:2332 [U] BJ:130 [PHE] B5:3997 [A] ❌ 7O7Y_BJ_B5
F:153 [ASP] A:2334 [G] BJ:130 [PHE] B5:3999 [A] ❌ 7O7Y_BJ_B5
F:153 [ASP] A:2340 [C] BJ:130 [PHE] B5:4005 [C] ❌ 7O7Y_BJ_B5
F:129 [THR] A:2331 [G] BJ:105 [PHE] B5:3996 [G] ❌ 7O7Y_BJ_B5
F:129 [THR] A:2332 [U] BJ:105 [PHE] B5:3997 [A] ❌ 7O7Y_BJ_B5
F:123 [ASP] A:2330 [G] BJ:101 [ASP] B5:3995 [G] ❌ 7O7Y_BJ_B5
F:123 [ASP] A:2342 [U] BJ:101 [ASP] B5:4007 [C] ❌ 7O7Y_BJ_B5
F:40 [VAL] A:2335 [G] BJ:25 [CYS] B5:4000 [G] ❌ 7O7Y_BJ_B5
F:130 [LEU] A:2332 [U] BJ:106 [GLY] B5:3997 [A] ❌ 7O7Y_BJ_B5
F:39 [GLY] A:2333 [U] BJ:24 [ILE] B5:3998 [C] ❌ 7O7Y_BJ_B5
F:39 [GLY] A:2339 [U] BJ:24 [ILE] B5:4004 [C] ❌ 7O7Y_BJ_B5
F:121 [ALA] A:2331 [G] BJ:99 [PHE] B5:3996 [G] ❌ 7O7Y_BJ_B5
F:130 [LEU] A:2330 [G] BJ:106 [GLY] B5:3995 [G] ❌ 6S0Z_F_A
F:132 [VAL] A:2331 [G] BJ:108 [GLY] B5:3996 [G] ❌ 6S0Z_F_A
F:152 [MET] A:2339 [U] BJ:129 [ASP] B5:4004 [C] ❌ 6S0Z_F_A
F:152 [MET] A:2331 [G] BJ:129 [ASP] B5:3996 [G] ❌ 6S0Z_F_A
F:38 [MET] A:2339 [U] BJ:23 [ASN] B5:4004 [C] ❌ 6S0Z_F_A
F:38 [MET] A:2340 [C] BJ:23 [ASN] B5:4005 [C] ❌ 6S0Z_F_A
F:38 [MET] A:2331 [G] BJ:23 [ASN] B5:3996 [G] ❌ 6S0Z_F_A
F:40 [VAL] A:2334 [G] BJ:25 [CYS] B5:3999 [A] ❌ 6S0Z_F_A
F:70 [ALA] A:2338 [A] BJ:53 [ALA] B5:4003 [A] ❌ 6S0Z_F_A
F:72 [LYS] A:2338 [A] BJ:54 [ARG] B5:4003 [A] ❌ 6S0Z_F_A
F:75 [ALA] A:2337 [A] BJ:57 [VAL] B5:4002 [A] ❌ 6S0Z_F_A
F:77 [PHE] A:2335 [G] BJ:60 [PHE] B5:4000 [G] ❌ 6S0Z_F_A
F:77 [PHE] A:2337 [A] BJ:60 [PHE] B5:4002 [A] ❌ 6S0Z_F_A
F:120 [LYS] A:2330 [G] BJ:98 [ASN] B5:3995 [G] ❌ 6S0Z_F_A
F:121 [ALA] A:2329 [U] BJ:99 [PHE] B5:3994 [A] ❌ 6S0Z_F_A
F:123 [ASP] A:2328 [A] BJ:101 [ASP] B5:3993 [G] ❌ 6S0Z_A:2328 no longer at interface
F:125 [ARG] A:2328 [A] BJ:102 [THR] B5:3993 [G] ❌ 6S0Z_A:2328 no longer at interface
F:74 [ILE] A:2337 [A] BJ:56 [THR] B5:4002 [A] ❌ 7O7Y_BJ:56 no longer at interface
F:74 [ILE] A:2338 [A] BJ:56 [THR] B5:4003 [A] ❌ 7O7Y_BJ:56 no longer at interface
F:74 [ILE] A:2339 [U] BJ:56 [THR] B5:4004 [C] ❌ 7O7Y_BJ:56 no longer at interface
F:127 [ASN] A:2341 [A] BJ:103 [GLY] B5:4006 [U] ❌ 7O7Y_BJ:103 no longer at interface
F:127 [ASN] A:2342 [U] BJ:103 [GLY] B5:4007 [C] ❌ 7O7Y_BJ:103 no longer at interface
F:88 [LYS] A:2340 [C] BJ:72 [CYS] B5:4005 [C] ❌ 7O7Y_BJ:72 no longer at interface
F:88 [LYS] A:2341 [A] BJ:72 [CYS] B5:4006 [U] ❌ 7O7Y_BJ:72 no longer at interface
F:76 [THR] A:2337 [A] BJ:58 [ARG] B5:4002 [A] ❌ 7O7Y_BJ:58 no longer at interface
F:76 [THR] A:2338 [A] BJ:58 [ARG] B5:4003 [A] ❌ 7O7Y_BJ:58 no longer at interface
F:155 [VAL] A:2330 [G] BJ:132 [VAL] B5:3995 [G] ❌ 7O7Y_BJ:132 no longer at interface
F:155 [VAL] A:2340 [C] BJ:132 [VAL] B5:4005 [C] ❌ 7O7Y_BJ:132 no longer at interface
F:155 [VAL] A:2341 [A] BJ:132 [VAL] B5:4006 [U] ❌ 7O7Y_BJ:132 no longer at interface
F:157 [VAL] A:2341 [A] BJ:134 [LEU] B5:4006 [U] ❌ 7O7Y_BJ:134 no longer at interface
F:157 [VAL] A:2342 [U] BJ:134 [LEU] B5:4007 [C] ❌ 7O7Y_BJ:134 no longer at interface
F:33 [LYS] A:2341 [A] BJ:18 [ARG] B5:4006 [U] ❌ 7O7Y_BJ:18 no longer at interface
F:33 [LYS] A:2342 [U] BJ:18 [ARG] B5:4007 [C] ❌ 7O7Y_BJ:18 no longer at interface
F:35 [VAL] A:2340 [C] BJ:20 [LEU] B5:4005 [C] ❌ 7O7Y_BJ:20 no longer at interface
F:35 [VAL] A:2341 [A] BJ:20 [LEU] B5:4006 [U] ❌ 7O7Y_BJ:20 no longer at interface
F:128 [TYR] A:2330 [G] BJ:104 [ASN] B5:3995 [G] ❌ 6S0Z_F:128 no longer at interface
F:128 [TYR] A:2342 [U] BJ:104 [ASN] B5:4007 [C] ❌ 6S0Z_F:128 no longer at interface
F:128 [TYR] A:2341 [A] BJ:104 [ASN] B5:4006 [U] ❌ 6S0Z_F:128 no longer at interface
F:133 [LYS] A:2332 [U] BJ:109 [ILE] B5:3997 [A] ❌ 6S0Z_F:133 no longer at interface
F:134 [GLU] A:2332 [U] BJ:110 [GLN] B5:3997 [A] ❌ 6S0Z_F:134 no longer at interface
F:149 [VAL] A:2332 [U] BJ:126 [TYR] B5:3997 [A] ❌ 6S0Z_F:149 no longer at interface
F:150 [ARG] A:2332 [U] BJ:127 [GLY] B5:3997 [A] ❌ 6S0Z_F:150 no longer at interface
F:154 [ILE] A:2330 [G] BJ:131 [TYR] B5:3995 [G] ❌ 6S0Z_F:154 no longer at interface
F:154 [ILE] A:2331 [G] BJ:131 [TYR] B5:3996 [G] ❌ 6S0Z_F:154 no longer at interface
F:154 [ILE] A:2329 [U] BJ:131 [TYR] B5:3994 [A] ❌ 6S0Z_F:154 no longer at interface
F:154 [ILE] A:2341 [A] BJ:131 [TYR] B5:4006 [U] ❌ 6S0Z_F:154 no longer at interface
F:156 [ILE] A:2342 [U] BJ:133 [VAL] B5:4007 [C] ❌ 6S0Z_F:156 no longer at interface
F:156 [ILE] A:2341 [A] BJ:133 [VAL] B5:4006 [U] ❌ 6S0Z_F:156 no longer at interface
F:34 [ILE] A:2342 [U] BJ:19 [LYS] B5:4007 [C] ❌ 6S0Z_F:34 no longer at interface
F:34 [ILE] A:2341 [A] BJ:19 [LYS] B5:4006 [U] ❌ 6S0Z_F:34 no longer at interface
F:36 [VAL] A:2340 [C] BJ:21 [CYS] B5:4005 [C] ❌ 6S0Z_F:36 no longer at interface
F:36 [VAL] A:2341 [A] BJ:21 [CYS] B5:4006 [U] ❌ 6S0Z_F:36 no longer at interface
F:41 [GLY] A:2332 [U] BJ:26 [VAL] B5:3997 [A] ❌ 6S0Z_F:41 no longer at interface
F:41 [GLY] A:2334 [G] BJ:26 [VAL] B5:3999 [A] ❌ 6S0Z_F:41 no longer at interface
F:42 [ASP] A:2338 [A] BJ:27 [GLY] B5:4003 [A] ❌ 6S0Z_F:42 no longer at interface
F:42 [ASP] A:2334 [G] BJ:27 [GLY] B5:3999 [A] ❌ 6S0Z_F:42 no longer at interface
F:73 [SER] A:2339 [U] BJ:55 [TYR] B5:4004 [C] ❌ 6S0Z_F:73 no longer at interface
F:78 [ARG] A:2338 [A] BJ:62 [ILE] B5:4003 [A] ❌ 6S0Z_F:78 no longer at interface
F:87 [ALA] A:2340 [C] BJ:71 [HIS] B5:4005 [C] ❌ 6S0Z_F:87 no longer at interface
F:87 [ALA] A:2341 [A] BJ:71 [HIS] B5:4006 [U] ❌ 6S0Z_F:87 no longer at interface
F:89 [VAL] A:2341 [A] BJ:73 [THR] B5:4006 [U] ❌ 6S0Z_F:89 no longer at interface
F:119 [LYS] A:2330 [G] BJ:97 [ASN] B5:3995 [G] ❌ 6S0Z_F:119 no longer at interface
F:119 [LYS] A:2331 [G] BJ:97 [ASN] B5:3996 [G] ❌ 6S0Z_F:119 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L5 0.89 4.72 0.15 0.72 0.89 0.73 1.0 0.35 0.20 0.13 0.63


Other pairs involving 6S0Z_F_A or 7O7Y_BJ_B5

Total number of entries: 16

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
4Y4O_1G_1A 6S0Z_F_A 0.67 0.96 1.7 0.57 Ribosomal protein L5 Bacterial large subunit ribosomal RNA compare
4Y4O_1G_1A 7O7Y_BJ_B5 0.48 0.89 4.25 0.09 Ribosomal protein L5 compare
7ASM_F_A 7O7Y_BJ_B5 0.34 0.89 4.56 0.14 Ribosomal protein L5 compare
6AZ3_D_2 6S0Z_F_A 0.39 0.82 3.19 0.12 Ribosomal protein L5 compare
6AZ3_D_2 7O7Y_BJ_B5 0.92 0.92 0.74 0.75 Ribosomal protein L5 Eukaryotic large subunit ribosomal RNA compare
7K00_f_a 7O7Y_BJ_B5 0.84 0.89 3.13 0.33 Ribosomal protein L5 compare
1VQ8_D_0 7O7Y_BJ_B5 0.34 0.93 3.98 0.05 Ribosomal protein L5 compare
1VQ8_D_0 6S0Z_F_A 0.67 0.93 3.72 0.29 Ribosomal protein L5 compare
5NS3_A_C 7O7Y_BJ_B5 0.60 0.66 1.88 0.3 Ribosomal protein L5 compare
5NS4_A_C 7O7Y_BJ_B5 0.64 0.68 1.95 0.27 Ribosomal protein L5 compare
1YHQ_D_0 7O7Y_BJ_B5 0.31 0.93 3.99 0.05 Ribosomal protein L5 compare
1YHQ_D_0 6S0Z_F_A 0.68 0.93 3.49 0.29 Ribosomal protein L5 compare
6S0Z_F_A 7K00_f_a 0.59 0.97 2.39 0.52 Ribosomal protein L5 Bacterial large subunit ribosomal RNA compare
6S0Z_F_A 7ASM_F_A 0.57 0.98 2.05 0.88 Ribosomal protein L5 Bacterial large subunit ribosomal RNA compare
6S0Z_F_A 7O7Y_BJ_B5 0.35 0.89 4.72 0.15 Ribosomal protein L5 compare
6S0Z_F_A 7RYG_F_A 0.59 0.97 3.23 0.48 Ribosomal protein L5 Bacterial large subunit ribosomal RNA compare