Interface analysis
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Protein
CartoonLicorice
Surface
RNA
CartoonLicorice
Surface
Color
StructureStructure (with hetatm)
Chain
Chainbow
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InterfaceRNA
Protein
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Interface
show interface as licoriceCommon contacts -
| 7ASM_F
|
7ASM_A
|
7K00_f
|
7K00_a
|
Conserved?
|
|---|---|---|---|---|
| F:74 [ILE] | A:2337 [A] | f:74 [VAL] | a:2310 [C] | ✔ |
| F:74 [ILE] | A:2338 [A] | f:74 [VAL] | a:2311 [A] | ✔ |
| F:38 [MET] | A:2332 [U] | f:37 [ASN] | a:2305 [U] | ✔ |
| F:131 [GLY] | A:2331 [G] | f:130 [MET] | a:2304 [G] | ✔ |
| F:131 [GLY] | A:2332 [U] | f:130 [MET] | a:2305 [U] | ✔ |
| F:132 [VAL] | A:2332 [U] | f:131 [GLY] | a:2305 [U] | ✔ |
| F:79 [LEU] | A:2338 [A] | f:79 [ILE] | a:2311 [A] | ✔ |
| F:69 [LYS] | A:2339 [U] | f:68 [THR] | a:2312 [U] | ✔ |
| F:85 [ILE] | A:2339 [U] | f:86 [GLY] | a:2312 [U] | ✔ |
| F:72 [LYS] | A:2339 [U] | f:72 [LYS] | a:2312 [U] | ✔ |
| F:77 [PHE] | A:2338 [A] | f:77 [PHE] | a:2311 [A] | ✔ |
| F:123 [ASP] | A:2329 [U] | f:124 [GLY] | a:2302 [U] | ✔ |
| F:40 [VAL] | A:2332 [U] | f:39 [GLY] | a:2305 [U] | ✔ |
| F:40 [VAL] | A:2333 [U] | f:39 [GLY] | a:2306 [C] | ✔ |
| F:40 [VAL] | A:2339 [U] | f:39 [GLY] | a:2312 [U] | ✔ |
| F:71 [LYS] | A:2339 [U] | f:71 [ARG] | a:2312 [U] | ✔ |
| F:70 [ALA] | A:2339 [U] | f:70 [ALA] | a:2312 [U] | ✔ |
| F:130 [LEU] | A:2331 [G] | f:129 [SER] | a:2304 [G] | ✔ |
| F:42 [ASP] | A:2338 [A] | f:41 [GLY] | a:2311 [A] | ✔ |
| F:39 [GLY] | A:2332 [U] | f:38 [MET] | a:2305 [U] | ✔ |
| F:39 [GLY] | A:2339 [U] | f:38 [MET] | a:2312 [U] | ✔ |
| F:128 [TYR] | A:2330 [G] | f:127 [ASN] | a:2303 [G] | ✔ |
| F:151 [GLY] | A:2332 [U] | f:152 [LEU] | a:2305 [U] | ✔ |
| F:121 [ALA] | A:2330 [G] | f:122 [PHE] | a:2303 [G] | ✔ |
| F:133 [LYS] | A:2332 [U] | f:132 [VAL] | a:2305 [U] | ✔ |
| F:120 [LYS] | A:2330 [G] | f:121 [SER] | a:2303 [G] | ✔ |
| F:122 [PHE] | A:2329 [U] | f:123 [ASP] | a:2302 [U] | ✔ |
| F:125 [ARG] | A:2342 [U] | f:125 [ARG] | a:2315 [G] | ✔ |
| F:86 [GLY] | A:2339 [U] | f:87 [CYS] | a:2312 [U] | ✔ |
| F:152 [MET] | A:2332 [U] | f:153 [ASP] | a:2305 [U] | ✔ |
| F:123 [ASP] | A:2330 [G] | f:124 [GLY] | a:2303 [G] | ❌ 7K00_f_a |
| F:76 [THR] | A:2335 [G] | f:76 [GLY] | a:2308 [G] | ❌ 7K00_f_a |
| F:120 [LYS] | A:2331 [G] | f:121 [SER] | a:2304 [G] | ❌ 7ASM_F_A |
| F:121 [ALA] | A:2329 [U] | f:122 [PHE] | a:2302 [U] | ❌ 7ASM_F_A |
| F:122 [PHE] | A:2330 [G] | f:123 [ASP] | a:2303 [G] | ❌ 7ASM_F_A |
| F:122 [PHE] | A:2342 [U] | f:123 [ASP] | a:2315 [G] | ❌ 7ASM_F_A |
| F:122 [PHE] | A:2341 [A] | f:123 [ASP] | a:2314 [A] | ❌ 7ASM_F_A |
| F:128 [TYR] | A:2341 [A] | f:127 [ASN] | a:2314 [A] | ❌ 7ASM_F_A |
| F:128 [TYR] | A:2342 [U] | f:127 [ASN] | a:2315 [G] | ❌ 7ASM_F_A |
| F:130 [LEU] | A:2330 [G] | f:129 [SER] | a:2303 [G] | ❌ 7ASM_F_A |
| F:132 [VAL] | A:2331 [G] | f:131 [GLY] | a:2304 [G] | ❌ 7ASM_F_A |
| F:152 [MET] | A:2340 [C] | f:153 [ASP] | a:2313 [C] | ❌ 7ASM_F_A |
| F:152 [MET] | A:2339 [U] | f:153 [ASP] | a:2312 [U] | ❌ 7ASM_F_A |
| F:152 [MET] | A:2331 [G] | f:153 [ASP] | a:2304 [G] | ❌ 7ASM_F_A |
| F:38 [MET] | A:2340 [C] | f:37 [ASN] | a:2313 [C] | ❌ 7ASM_F_A |
| F:38 [MET] | A:2339 [U] | f:37 [ASN] | a:2312 [U] | ❌ 7ASM_F_A |
| F:38 [MET] | A:2331 [G] | f:37 [ASN] | a:2304 [G] | ❌ 7ASM_F_A |
| F:69 [LYS] | A:2340 [C] | f:68 [THR] | a:2313 [C] | ❌ 7ASM_F_A |
| F:70 [ALA] | A:2338 [A] | f:70 [ALA] | a:2311 [A] | ❌ 7ASM_F_A |
| F:71 [LYS] | A:2338 [A] | f:71 [ARG] | a:2311 [A] | ❌ 7ASM_F_A |
| F:76 [THR] | A:2337 [A] | f:76 [GLY] | a:2310 [C] | ❌ 7ASM_F_A |
| F:77 [PHE] | A:2335 [G] | f:77 [PHE] | a:2308 [G] | ❌ 7ASM_F_A |
| F:77 [PHE] | A:2337 [A] | f:77 [PHE] | a:2310 [C] | ❌ 7ASM_F_A |
| F:125 [ARG] | A:2343 [U] | f:125 [ARG] | a:2316 [G] | ❌ 7ASM_A:2343 no longer at interface |
| F:40 [VAL] | A:2334 [G] | f:39 [GLY] | a:2307 [G] | ❌ 7ASM_A:2334 no longer at interface |
| F:41 [GLY] | A:2334 [G] | f:40 [VAL] | a:2307 [G] | ❌ 7ASM_F:41, 7ASM_A:2334 no longer at interface |
| F:42 [ASP] | A:2334 [G] | f:41 [GLY] | a:2307 [G] | ❌ 7ASM_A:2334 no longer at interface |
| F:71 [LYS] | A:2326 [G] | f:71 [ARG] | a:2299 [U] | ❌ 7ASM_A:2326 no longer at interface |
| F:71 [LYS] | A:2325 [A] | f:71 [ARG] | a:2298 [A] | ❌ 7ASM_A:2325 no longer at interface |
| F:72 [LYS] | A:2327 [A] | f:72 [LYS] | a:2300 [C] | ❌ 7ASM_A:2327 no longer at interface |
| F:72 [LYS] | A:2326 [G] | f:72 [LYS] | a:2299 [U] | ❌ 7ASM_A:2326 no longer at interface |
| F:72 [LYS] | A:2325 [A] | f:72 [LYS] | a:2298 [A] | ❌ 7ASM_A:2325 no longer at interface |
| F:76 [THR] | A:2336 [A] | f:76 [GLY] | a:2309 [A] | ❌ 7ASM_A:2336 no longer at interface |
| F:78 [ARG] | A:2338 [A] | f:78 [LYS] | a:2311 [A] | ❌ 7K00_f:78 no longer at interface |
| F:37 [ASN] | A:2340 [C] | f:36 [LEU] | a:2313 [C] | ❌ 7K00_f:36 no longer at interface |
| F:129 [THR] | A:2330 [G] | f:128 [TYR] | a:2303 [G] | ❌ 7K00_f:128 no longer at interface |
| F:129 [THR] | A:2331 [G] | f:128 [TYR] | a:2304 [G] | ❌ 7K00_f:128 no longer at interface |
| F:88 [LYS] | A:2340 [C] | f:89 [VAL] | a:2313 [C] | ❌ 7K00_f:89 no longer at interface |
| F:68 [THR] | A:2339 [U] | f:67 [ILE] | a:2312 [U] | ❌ 7K00_f:67 no longer at interface |
| F:68 [THR] | A:2340 [C] | f:67 [ILE] | a:2313 [C] | ❌ 7K00_f:67 no longer at interface |
| F:155 [VAL] | A:2340 [C] | f:156 [ILE] | a:2313 [C] | ❌ 7K00_f:156 no longer at interface |
| F:155 [VAL] | A:2341 [A] | f:156 [ILE] | a:2314 [A] | ❌ 7K00_f:156 no longer at interface |
| F:35 [VAL] | A:2340 [C] | f:34 [ILE] | a:2313 [C] | ❌ 7K00_f:34 no longer at interface |
| F:35 [VAL] | A:2341 [A] | f:34 [ILE] | a:2314 [A] | ❌ 7K00_f:34 no longer at interface |
| F:75 [ALA] | A:2335 [G] | f:75 [ALA] | a:2308 [G] | ❌ 7K00_f:75 no longer at interface |
| F:75 [ALA] | A:2337 [A] | f:75 [ALA] | a:2310 [C] | ❌ 7K00_f:75 no longer at interface |
| F:119 [LYS] | A:2330 [G] | f:120 [LYS] | a:2303 [G] | ❌ 7ASM_F:119 no longer at interface |
| F:119 [LYS] | A:2331 [G] | f:120 [LYS] | a:2304 [G] | ❌ 7ASM_F:119 no longer at interface |
| F:134 [GLU] | A:2332 [U] | f:133 [ARG] | a:2305 [U] | ❌ 7ASM_F:134 no longer at interface |
| F:149 [VAL] | A:2332 [U] | f:150 [ARG] | a:2305 [U] | ❌ 7ASM_F:149 no longer at interface |
| F:150 [ARG] | A:2332 [U] | f:151 [GLY] | a:2305 [U] | ❌ 7ASM_F:150 no longer at interface |
| F:153 [ASP] | A:2331 [G] | f:154 [ILE] | a:2304 [G] | ❌ 7ASM_F:153 no longer at interface |
| F:154 [ILE] | A:2341 [A] | f:155 [THR] | a:2314 [A] | ❌ 7ASM_F:154 no longer at interface |
| F:154 [ILE] | A:2340 [C] | f:155 [THR] | a:2313 [C] | ❌ 7ASM_F:154 no longer at interface |
| F:154 [ILE] | A:2330 [G] | f:155 [THR] | a:2303 [G] | ❌ 7ASM_F:154 no longer at interface |
| F:156 [ILE] | A:2342 [U] | f:157 [THR] | a:2315 [G] | ❌ 7ASM_F:156 no longer at interface |
| F:156 [ILE] | A:2341 [A] | f:157 [THR] | a:2314 [A] | ❌ 7ASM_F:156 no longer at interface |
| F:33 [LYS] | A:2342 [U] | f:32 [GLU] | a:2315 [G] | ❌ 7ASM_F:33 no longer at interface |
| F:34 [ILE] | A:2342 [U] | f:33 [LYS] | a:2315 [G] | ❌ 7ASM_F:34 no longer at interface |
| F:34 [ILE] | A:2341 [A] | f:33 [LYS] | a:2314 [A] | ❌ 7ASM_F:34 no longer at interface |
| F:36 [VAL] | A:2340 [C] | f:35 [THR] | a:2313 [C] | ❌ 7ASM_F:36 no longer at interface |
| F:36 [VAL] | A:2341 [A] | f:35 [THR] | a:2314 [A] | ❌ 7ASM_F:36 no longer at interface |
| F:44 [VAL] | A:2338 [A] | f:44 [ILE] | a:2311 [A] | ❌ 7ASM_F:44 no longer at interface |
| F:84 [PRO] | A:2338 [A] | f:85 [ILE] | a:2311 [A] | ❌ 7ASM_F:84 no longer at interface |
| F:84 [PRO] | A:2339 [U] | f:85 [ILE] | a:2312 [U] | ❌ 7ASM_F:84 no longer at interface |
| F:87 [ALA] | A:2340 [C] | f:88 [LYS] | a:2313 [C] | ❌ 7ASM_F:87 no longer at interface |
| F:87 [ALA] | A:2341 [A] | f:88 [LYS] | a:2314 [A] | ❌ 7ASM_F:87 no longer at interface |
Export the table of contacts
Properties of this pair
|
Common ECOD label(s) |
Common RFAM label(s) |
Interface TM-score |
Interface RMSD |
Percentage identity |
Protein TM-score |
RNA TM-score |
Protein coverage |
RNA coverage |
Percentage conservation |
Apolar conservation |
H-bond conservation |
Percentage switching out |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Ribosomal protein L5 | Bacterial large subunit ribosomal RNA | 0.96 | 3.21 | 0.11 | 0.88 | 0.97 | 0.74 | 1.0 | 0.34 | 0.26 | 0.10 | 0.66 |
Other pairs involving 7ASM_F_A or 7K00_f_a
Total number of entries: 16