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All interfaces > All interologs > Interface groups > group133 > 7K00_f_a vs 7O7Y_BJ_B5

Interface analysis


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Common contacts -

7K00_f
7K00_a
7O7Y_BJ
7O7Y_B5
Conserved?
f:153 [ASP] a:2304 [G] BJ:129 [ASP] B5:3996 [G] ✔
f:153 [ASP] a:2305 [U] BJ:129 [ASP] B5:3997 [A] ✔
f:153 [ASP] a:2312 [U] BJ:129 [ASP] B5:4004 [C] ✔
f:130 [MET] a:2304 [G] BJ:107 [PHE] B5:3996 [G] ✔
f:130 [MET] a:2305 [U] BJ:107 [PHE] B5:3997 [A] ✔
f:42 [GLU] a:2307 [G] BJ:27 [GLY] B5:3999 [A] ✔
f:42 [GLU] a:2311 [A] BJ:27 [GLY] B5:4003 [A] ✔
f:38 [MET] a:2305 [U] BJ:24 [ILE] B5:3997 [A] ✔
f:131 [GLY] a:2304 [G] BJ:108 [GLY] B5:3996 [G] ✔
f:131 [GLY] a:2305 [U] BJ:108 [GLY] B5:3997 [A] ✔
f:132 [VAL] a:2305 [U] BJ:109 [ILE] B5:3997 [A] ✔
f:127 [ASN] a:2303 [G] BJ:104 [ASN] B5:3995 [G] ✔
f:127 [ASN] a:2314 [A] BJ:104 [ASN] B5:4006 [U] ✔
f:127 [ASN] a:2315 [G] BJ:104 [ASN] B5:4007 [C] ✔
f:37 [ASN] a:2304 [G] BJ:23 [ASN] B5:3996 [G] ✔
f:37 [ASN] a:2305 [U] BJ:23 [ASN] B5:3997 [A] ✔
f:37 [ASN] a:2312 [U] BJ:23 [ASN] B5:4004 [C] ✔
f:37 [ASN] a:2313 [C] BJ:23 [ASN] B5:4005 [C] ✔
f:69 [LYS] a:2312 [U] BJ:52 [LYS] B5:4004 [C] ✔
f:124 [GLY] a:2302 [U] BJ:101 [ASP] B5:3994 [A] ✔
f:152 [LEU] a:2305 [U] BJ:128 [LEU] B5:3997 [A] ✔
f:88 [LYS] a:2313 [C] BJ:71 [HIS] B5:4005 [C] ✔
f:88 [LYS] a:2314 [A] BJ:71 [HIS] B5:4006 [U] ✔
f:68 [THR] a:2312 [U] BJ:51 [SER] B5:4004 [C] ✔
f:68 [THR] a:2313 [C] BJ:51 [SER] B5:4005 [C] ✔
f:85 [ILE] a:2311 [A] BJ:68 [ILE] B5:4003 [A] ✔
f:85 [ILE] a:2312 [U] BJ:68 [ILE] B5:4004 [C] ✔
f:77 [PHE] a:2308 [G] BJ:60 [PHE] B5:4000 [G] ✔
f:77 [PHE] a:2310 [C] BJ:60 [PHE] B5:4002 [A] ✔
f:77 [PHE] a:2311 [A] BJ:60 [PHE] B5:4003 [A] ✔
f:123 [ASP] a:2302 [U] BJ:100 [SER] B5:3994 [A] ✔
f:123 [ASP] a:2303 [G] BJ:100 [SER] B5:3995 [G] ✔
f:40 [VAL] a:2307 [G] BJ:26 [VAL] B5:3999 [A] ✔
f:133 [ARG] a:2305 [U] BJ:110 [GLN] B5:3997 [A] ✔
f:35 [THR] a:2313 [C] BJ:21 [CYS] B5:4005 [C] ✔
f:35 [THR] a:2314 [A] BJ:21 [CYS] B5:4006 [U] ✔
f:71 [ARG] a:2311 [A] BJ:54 [ARG] B5:4003 [A] ✔
f:71 [ARG] a:2312 [U] BJ:54 [ARG] B5:4004 [C] ✔
f:70 [ALA] a:2311 [A] BJ:53 [ALA] B5:4003 [A] ✔
f:70 [ALA] a:2312 [U] BJ:53 [ALA] B5:4004 [C] ✔
f:39 [GLY] a:2305 [U] BJ:25 [CYS] B5:3997 [A] ✔
f:39 [GLY] a:2306 [C] BJ:25 [CYS] B5:3998 [C] ✔
f:39 [GLY] a:2307 [G] BJ:25 [CYS] B5:3999 [A] ✔
f:39 [GLY] a:2312 [U] BJ:25 [CYS] B5:4004 [C] ✔
f:33 [LYS] a:2314 [A] BJ:19 [LYS] B5:4006 [U] ✔
f:33 [LYS] a:2315 [G] BJ:19 [LYS] B5:4007 [C] ✔
f:150 [ARG] a:2305 [U] BJ:126 [TYR] B5:3997 [A] ✔
f:151 [GLY] a:2305 [U] BJ:127 [GLY] B5:3997 [A] ✔
f:121 [SER] a:2303 [G] BJ:98 [ASN] B5:3995 [G] ✔
f:121 [SER] a:2304 [G] BJ:98 [ASN] B5:3996 [G] ✔
f:157 [THR] a:2314 [A] BJ:133 [VAL] B5:4006 [U] ✔
f:157 [THR] a:2315 [G] BJ:133 [VAL] B5:4007 [C] ✔
f:154 [ILE] a:2304 [G] BJ:130 [PHE] B5:3996 [G] ✔
f:120 [LYS] a:2303 [G] BJ:97 [ASN] B5:3995 [G] ✔
f:120 [LYS] a:2304 [G] BJ:97 [ASN] B5:3996 [G] ✔
f:122 [PHE] a:2302 [U] BJ:99 [PHE] B5:3994 [A] ✔
f:122 [PHE] a:2303 [G] BJ:99 [PHE] B5:3995 [G] ✔
f:125 [ARG] a:2315 [G] BJ:102 [THR] B5:4007 [C] ✔
f:125 [ARG] a:2316 [G] BJ:102 [THR] B5:4008 [C] ✔
f:86 [GLY] a:2312 [U] BJ:69 [ALA] B5:4004 [C] ✔
f:155 [THR] a:2303 [G] BJ:131 [TYR] B5:3995 [G] ✔
f:155 [THR] a:2314 [A] BJ:131 [TYR] B5:4006 [U] ✔
f:129 [SER] a:2303 [G] BJ:106 [GLY] B5:3995 [G] ✔
f:129 [SER] a:2304 [G] BJ:106 [GLY] B5:3996 [G] ✔
f:153 [ASP] a:2313 [C] BJ:129 [ASP] B5:4005 [C] ❌ 7O7Y_BJ_B5
f:42 [GLU] a:2306 [C] BJ:27 [GLY] B5:3998 [C] ❌ 7O7Y_BJ_B5
f:38 [MET] a:2312 [U] BJ:24 [ILE] B5:4004 [C] ❌ 7O7Y_BJ_B5
f:123 [ASP] a:2314 [A] BJ:100 [SER] B5:4006 [U] ❌ 7O7Y_BJ_B5
f:123 [ASP] a:2315 [G] BJ:100 [SER] B5:4007 [C] ❌ 7O7Y_BJ_B5
f:155 [THR] a:2313 [C] BJ:131 [TYR] B5:4005 [C] ❌ 7O7Y_BJ_B5
f:155 [THR] a:2304 [G] BJ:131 [TYR] B5:3996 [G] ❌ 7K00_f_a
f:155 [THR] a:2302 [U] BJ:131 [TYR] B5:3994 [A] ❌ 7K00_f_a
f:39 [GLY] a:2311 [A] BJ:25 [CYS] B5:4003 [A] ❌ 7K00_f_a
f:40 [VAL] a:2305 [U] BJ:26 [VAL] B5:3997 [A] ❌ 7K00_f_a
f:71 [ARG] a:2298 [A] BJ:54 [ARG] B5:3990 [A] ❌ 7O7Y_B5:3990 no longer at interface
f:71 [ARG] a:2299 [U] BJ:54 [ARG] B5:3991 [G] ❌ 7O7Y_B5:3991 no longer at interface
f:76 [GLY] a:2309 [A] BJ:58 [ARG] B5:4001 [A] ❌ 7O7Y_BJ:58, 7O7Y_B5:4001 no longer at interface
f:124 [GLY] a:2301 [C] BJ:101 [ASP] B5:3993 [G] ❌ 7K00_a:2301 no longer at interface
f:125 [ARG] a:2301 [C] BJ:102 [THR] B5:3993 [G] ❌ 7K00_a:2301 no longer at interface
f:74 [VAL] a:2310 [C] BJ:56 [THR] B5:4002 [A] ❌ 7O7Y_BJ:56 no longer at interface
f:74 [VAL] a:2311 [A] BJ:56 [THR] B5:4003 [A] ❌ 7O7Y_BJ:56 no longer at interface
f:32 [GLU] a:2315 [G] BJ:18 [ARG] B5:4007 [C] ❌ 7O7Y_BJ:18 no longer at interface
f:76 [GLY] a:2310 [C] BJ:58 [ARG] B5:4002 [A] ❌ 7O7Y_BJ:58 no longer at interface
f:79 [ILE] a:2311 [A] BJ:63 [ARG] B5:4003 [A] ❌ 7O7Y_BJ:63 no longer at interface
f:87 [CYS] a:2312 [U] BJ:70 [VAL] B5:4004 [C] ❌ 7O7Y_BJ:70 no longer at interface
f:128 [TYR] a:2303 [G] BJ:105 [PHE] B5:3995 [G] ❌ 7K00_f:128 no longer at interface
f:36 [LEU] a:2313 [C] BJ:22 [LEU] B5:4005 [C] ❌ 7K00_f:36 no longer at interface
f:73 [SER] a:2312 [U] BJ:55 [TYR] B5:4004 [C] ❌ 7K00_f:73 no longer at interface
f:75 [ALA] a:2311 [A] BJ:57 [VAL] B5:4003 [A] ❌ 7K00_f:75 no longer at interface
f:75 [ALA] a:2310 [C] BJ:57 [VAL] B5:4002 [A] ❌ 7K00_f:75 no longer at interface
f:78 [LYS] a:2311 [A] BJ:62 [ILE] B5:4003 [A] ❌ 7K00_f:78 no longer at interface
f:90 [THR] a:2314 [A] BJ:73 [THR] B5:4006 [U] ❌ 7K00_f:90 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L5 0.89 3.13 0.33 0.75 0.89 0.81 0.78 0.84 0.77 0.36 0.64


Other pairs involving 7K00_f_a or 7O7Y_BJ_B5

Total number of entries: 16

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1VQ8_D_0 7O7Y_BJ_B5 0.34 0.93 3.98 0.05 Ribosomal protein L5 compare
1VQ8_D_0 7K00_f_a 0.35 0.9 3.47 0.08 Ribosomal protein L5 compare
1YHQ_D_0 7O7Y_BJ_B5 0.31 0.93 3.99 0.05 Ribosomal protein L5 compare
1YHQ_D_0 7K00_f_a 0.40 0.9 3.5 0.14 Ribosomal protein L5 compare
4Y4O_1G_1A 7O7Y_BJ_B5 0.48 0.89 4.25 0.09 Ribosomal protein L5 compare
4Y4O_1G_1A 7K00_f_a 0.92 0.97 1.89 0.55 Ribosomal protein L5 Bacterial large subunit ribosomal RNA compare
5NS3_A_C 7O7Y_BJ_B5 0.60 0.66 1.88 0.3 Ribosomal protein L5 compare
5NS4_A_C 7O7Y_BJ_B5 0.64 0.68 1.95 0.27 Ribosomal protein L5 compare
6AZ3_D_2 7K00_f_a 0.79 0.83 2.15 0.24 Ribosomal protein L5 compare
6AZ3_D_2 7O7Y_BJ_B5 0.92 0.92 0.74 0.75 Ribosomal protein L5 Eukaryotic large subunit ribosomal RNA compare
6S0Z_F_A 7K00_f_a 0.59 0.97 2.39 0.52 Ribosomal protein L5 Bacterial large subunit ribosomal RNA compare
6S0Z_F_A 7O7Y_BJ_B5 0.35 0.89 4.72 0.15 Ribosomal protein L5 compare
7ASM_F_A 7K00_f_a 0.34 0.96 3.21 0.11 Ribosomal protein L5 Bacterial large subunit ribosomal RNA compare
7ASM_F_A 7O7Y_BJ_B5 0.34 0.89 4.56 0.14 Ribosomal protein L5 compare
7K00_f_a 7O7Y_BJ_B5 0.84 0.89 3.13 0.33 Ribosomal protein L5 compare
7K00_f_a 7RYG_F_A 0.83 0.99 3.23 0.76 Ribosomal protein L5 Bacterial large subunit ribosomal RNA compare