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All interfaces > All interologs > Interface groups > group134 > 1VQ8_R_0 vs 6AZ3_T_5

Interface analysis


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Common contacts -

1VQ8_R
1VQ8_0
6AZ3_T
6AZ3_5
Conserved?
R:69 [LYS] 0:2841 [A] T:70 [THR] 5:17 [C] ✔
R:69 [LYS] 0:2842 [G] T:70 [THR] 5:18 [G] ✔
R:71 [LYS] 0:2831 [C] T:72 [GLN] 5:7 [C] ✔
R:71 [LYS] 0:2832 [C] T:72 [GLN] 5:8 [C] ✔
R:70 [SER] 0:2831 [C] T:71 [ALA] 5:7 [C] ✔
R:70 [SER] 0:2842 [G] T:71 [ALA] 5:18 [G] ✔
R:70 [SER] 0:2843 [A] T:71 [ALA] 5:19 [A] ✔
R:67 [GLY] 0:2841 [A] T:68 [GLY] 5:17 [C] ✔
R:68 [HIS] 0:2841 [A] T:69 [ARG] 5:17 [C] ✔
R:68 [HIS] 0:2842 [G] T:69 [ARG] 5:18 [G] ✔
R:70 [SER] 0:2832 [C] T:71 [ALA] 5:8 [C] ❌ 1VQ8_R_0
R:76 [ASP] 0:2842 [G] T:79 [THR] 5:18 [G] ❌ 1VQ8_R_0
R:42 [GLU] 0:2911 [C] T:43 [LYS] 5:129 [A] ❌ 1VQ8_R:42, 1VQ8_0:2911 no longer at interface
R:42 [GLU] 0:2912 [C] T:43 [LYS] 5:130 [C] ❌ 1VQ8_R:42, 1VQ8_0:2912 no longer at interface
R:45 [ASP] 0:2911 [C] T:46 [GLN] 5:129 [A] ❌ 1VQ8_R:45, 1VQ8_0:2911 no longer at interface
R:54 [ASP] 0:2910 [A] T:55 [THR] 5:127 [G] ❌ 1VQ8_R:54, 1VQ8_0:2910 no longer at interface
R:55 [GLN] 0:2911 [C] T:56 [ARG] 5:129 [A] ❌ 1VQ8_R:55, 1VQ8_0:2911 no longer at interface
R:68 [HIS] 0:2840 [A] T:69 [ARG] 5:16 [A] ❌ 1VQ8_0:2840 no longer at interface
R:70 [SER] 0:2830 [U] T:71 [ALA] 5:6 [C] ❌ 1VQ8_0:2830 no longer at interface
R:53 [GLY] 0:2832 [C] T:54 [LYS] 5:8 [C] ❌ 1VQ8_R:53 no longer at interface
R:54 [ASP] 0:2831 [C] T:55 [THR] 5:7 [C] ❌ 1VQ8_R:54 no longer at interface
R:54 [ASP] 0:2832 [C] T:55 [THR] 5:8 [C] ❌ 1VQ8_R:54 no longer at interface
R:55 [GLN] 0:2831 [C] T:56 [ARG] 5:7 [C] ❌ 1VQ8_R:55 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L22 0.88 1.88 0.07 0.94 0.67 0.43 0.45 0.69 0.56 0.50 0.85


Other pairs involving 1VQ8_R_0 or 6AZ3_T_5

Total number of entries: 13

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1VQ8_R_0 7ASM_Q_A 0.76 0.9 1.52 0.28 Ribosomal protein L22 compare
1VQ8_R_0 6AZ3_T_1,2 0.76 0.8 1.5 0.28 Ribosomal protein L22 compare
1VQ8_R_0 6S0Z_Q_A 0.64 0.92 1.69 0.22 Ribosomal protein L22 compare
1VQ8_R_0 7O7Y_BP_B5,B8 0.80 0.94 1.51 0.35 Ribosomal protein L22 compare
1VQ8_R_0 6AZ3_T_5 0.69 0.88 1.88 0.07 Ribosomal protein L22 compare
1VQ8_R_0 4Y4O_1W_1A 0.70 0.92 1.91 0.22 Ribosomal protein L22 compare
1VQ8_R_0 7O9M_T_A 0.65 0.91 2.65 0.09 Ribosomal protein L22 compare
1VQ8_R_0 7RYG_R_A 0.74 0.92 1.5 0.29 Ribosomal protein L22 compare
1VQ8_R_0 1YHQ_R_0 0.99 1.0 0.18 0.98 Ribosomal protein L22 Archaeal large subunit ribosomal RNA compare
1VQ8_R_0 7K00_r_a 0.72 0.91 2.03 0.26 Ribosomal protein L22 compare
1VQ8_R_0 7OF0_T_A 0.67 0.93 2.73 0.09 Ribosomal protein L22 compare
1YHQ_R_0 6AZ3_T_5 0.66 0.88 2.04 0.07 Ribosomal protein L22 compare
6AZ3_T_5 7O7Y_BP_B5,B8 0.83 0.96 0.66 0.57 Ribosomal protein L22 compare