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All interfaces > All interologs > Interface groups > group134 > 1VQ8_R_0 vs 7K00_r_a

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Licorice
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Licorice
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Common contacts -

1VQ8_R
1VQ8_0
7K00_r
7K00_a
Conserved?
R:19 [ARG] 0:499 [G] r:8 [ARG] a:493 [G] ✔
R:19 [ARG] 0:500 [G] r:8 [ARG] a:494 [G] ✔
R:132 [ARG] 0:840 [U] r:92 [ARG] a:747 [5MU] ✔
R:132 [ARG] 0:1689 [A] r:92 [ARG] a:1614 [A] ✔
R:137 [ASN] 0:2053 [G] r:97 [LEU] a:2012 [G] ✔
R:137 [ASN] 0:2054 [A] r:97 [LEU] a:2013 [A] ✔
R:136 [TRP] 0:2053 [G] r:96 [ILE] a:2012 [G] ✔
R:136 [TRP] 0:2054 [A] r:96 [ILE] a:2013 [A] ✔
R:128 [ARG] 0:840 [U] r:88 [ARG] a:747 [5MU] ✔
R:128 [ARG] 0:841 [A] r:88 [ARG] a:748 [G] ✔
R:128 [ARG] 0:843 [A] r:88 [ARG] a:750 [A] ✔
R:128 [ARG] 0:844 [A] r:88 [ARG] a:751 [A] ✔
R:128 [ARG] 0:1372 [A] r:88 [ARG] a:1268 [A] ✔
R:128 [ARG] 0:1689 [A] r:88 [ARG] a:1614 [A] ✔
R:128 [ARG] 0:1690 [C] r:88 [ARG] a:1615 [C] ✔
R:128 [ARG] 0:2054 [A] r:88 [ARG] a:2013 [A] ✔
R:128 [ARG] 0:2055 [A] r:88 [ARG] a:2014 [A] ✔
R:128 [ARG] 0:2648 [U] r:88 [ARG] a:2613 [U] ✔
R:116 [ALA] 0:524 [A] r:76 [VAL] a:518 [G] ✔
R:130 [MET] 0:840 [U] r:90 [LYS] a:747 [5MU] ✔
R:130 [MET] 0:841 [A] r:90 [LYS] a:748 [G] ✔
R:130 [MET] 0:844 [A] r:90 [LYS] a:751 [A] ✔
R:131 [GLY] 0:844 [A] r:91 [GLY] a:751 [A] ✔
R:131 [GLY] 0:1689 [A] r:91 [GLY] a:1614 [A] ✔
R:126 [LYS] 0:1431 [C] r:86 [MET] a:1325 [U] ✔
R:117 [HIS] 0:20 [G] r:77 [ASP] a:23 [G] ✔
R:117 [HIS] 0:21 [G] r:77 [ASP] a:24 [G] ✔
R:117 [HIS] 0:524 [A] r:77 [ASP] a:518 [G] ✔
R:36 [LYS] 0:525 [G] r:25 [ARG] a:519 [U] ✔
R:36 [LYS] 0:526 [U] r:25 [ARG] a:520 [G] ✔
R:98 [ASN] 0:492 [C] r:57 [ASN] a:486 [C] ✔
R:98 [ASN] 0:500 [G] r:57 [ASN] a:494 [G] ✔
R:98 [ASN] 0:501 [G] r:57 [ASN] a:495 [G] ✔
R:27 [HIS] 0:1370 [G] r:16 [LYS] a:1266 [G] ✔
R:94 [ASN] 0:493 [U] r:53 [SER] a:487 [C] ✔
R:94 [ASN] 0:499 [G] r:53 [SER] a:493 [G] ✔
R:94 [ASN] 0:500 [G] r:53 [SER] a:494 [G] ✔
R:26 [LYS] 0:1369 [A] r:15 [GLN] a:1265 [A] ✔
R:26 [LYS] 0:1370 [G] r:15 [GLN] a:1266 [G] ✔
R:133 [ALA] 0:1689 [A] r:93 [ALA] a:1614 [A] ✔
R:22 [GLN] 0:1428 [C] r:11 [ARG] a:1322 [A] ✔
R:22 [GLN] 0:2052 [U] r:11 [ARG] a:2011 [U] ✔
R:93 [GLU] 0:493 [U] r:52 [GLU] a:487 [C] ✔
R:33 [ARG] 0:525 [G] r:22 [ASP] a:519 [U] ✔
R:129 [ALA] 0:840 [U] r:89 [ALA] a:747 [5MU] ✔
R:129 [ALA] 0:841 [A] r:89 [ALA] a:748 [G] ✔
R:129 [ALA] 0:843 [A] r:89 [ALA] a:750 [A] ✔
R:129 [ALA] 0:844 [A] r:89 [ALA] a:751 [A] ✔
R:135 [ALA] 0:2054 [A] r:95 [ARG] a:2013 [A] ✔
R:135 [ALA] 0:2055 [A] r:95 [ARG] a:2014 [A] ✔
R:17 [MET] 0:499 [G] r:6 [LYS] a:493 [G] ✔
R:17 [MET] 0:500 [G] r:6 [LYS] a:494 [G] ✔
R:17 [MET] 0:501 [G] r:6 [LYS] a:495 [G] ✔
R:15 [LYS] 0:500 [G] r:4 [ILE] a:494 [G] ✔
R:15 [LYS] 0:501 [G] r:4 [ILE] a:495 [G] ✔
R:139 [PRO] 0:1370 [G] r:99 [ARG] a:1266 [G] ✔
R:139 [PRO] 0:2053 [G] r:99 [ARG] a:2012 [G] ✔
R:114 [VAL] 0:525 [G] r:74 [ILE] a:519 [U] ✔
R:102 [GLN] 0:501 [G] r:62 [ASP] a:495 [G] ✔
R:23 [MET] 0:2052 [U] r:12 [SER] a:2011 [U] ✔
R:127 [PRO] 0:1689 [A] r:87 [PRO] a:1614 [A] ✔
R:127 [PRO] 0:1690 [C] r:87 [PRO] a:1615 [C] ✔
R:115 [ALA] 0:524 [A] r:75 [PHE] a:518 [G] ✔
R:115 [ALA] 0:525 [G] r:75 [PHE] a:519 [U] ✔
R:118 [LYS] 0:21 [G] r:78 [GLU] a:24 [G] ✔
R:118 [LYS] 0:22 [U] r:78 [GLU] a:25 [U] ✔
R:118 [LYS] 0:1366 [C] r:78 [GLU] a:1262 [A] ✔
R:84 [ALA] 0:2051 [G] r:43 [ALA] a:2010 [G] ✔
R:24 [SER] 0:1370 [G] r:13 [SER] a:1266 [G] ✔
R:122 [GLN] 0:1428 [C] r:82 [MET] a:1322 [A] ✔
R:122 [GLN] 0:1429 [U] r:82 [MET] a:1323 [C] ✔
R:82 [GLU] 0:2050 [G] r:41 [LYS] a:2009 [A] ✔
R:82 [GLU] 0:2051 [G] r:41 [LYS] a:2010 [G] ✔
R:18 [LEU] 0:499 [G] r:7 [HIS] a:493 [G] ✔
R:138 [SER] 0:2052 [U] r:98 [LYS] a:2011 [U] ✔
R:138 [SER] 0:2053 [G] r:98 [LYS] a:2012 [G] ✔
R:134 [SER] 0:2054 [A] r:94 [ASP] a:2013 [A] ✔
R:134 [SER] 0:2055 [A] r:94 [ASP] a:2014 [A] ✔
R:101 [HIS] 0:491 [C] r:60 [HIS] a:485 [C] ✔
R:101 [HIS] 0:492 [C] r:60 [HIS] a:486 [C] ✔
R:101 [HIS] 0:501 [G] r:60 [HIS] a:495 [G] ✔
R:83 [LYS] 0:1433 [G] r:42 [LYS] a:1327 [A] ✔
R:83 [LYS] 0:2050 [G] r:42 [LYS] a:2009 [A] ✔
R:83 [LYS] 0:2051 [G] r:42 [LYS] a:2010 [G] ✔
R:83 [LYS] 0:2052 [U] r:42 [LYS] a:2011 [U] ✔
R:120 [GLY] 0:22 [U] r:80 [PRO] a:25 [U] ✔
R:29 [LYS] 0:523 [C] r:18 [ARG] a:517 [C] ✔
R:29 [LYS] 0:524 [A] r:18 [ARG] a:518 [G] ✔
R:16 [ALA] 0:500 [G] r:5 [ALA] a:494 [G] ✔
R:16 [ALA] 0:501 [G] r:5 [ALA] a:495 [G] ✔
R:119 [VAL] 0:21 [G] r:79 [GLY] a:24 [G] ✔
R:119 [VAL] 0:22 [U] r:79 [GLY] a:25 [U] ✔
R:132 [ARG] 0:2055 [A] r:92 [ARG] a:2014 [A] ❌ 7K00_r_a
R:136 [TRP] 0:1372 [A] r:96 [ILE] a:1268 [A] ❌ 7K00_r_a
R:136 [TRP] 0:1431 [C] r:96 [ILE] a:1325 [U] ❌ 7K00_r_a
R:136 [TRP] 0:2052 [U] r:96 [ILE] a:2011 [U] ❌ 7K00_r_a
R:27 [HIS] 0:2051 [G] r:16 [LYS] a:2010 [G] ❌ 7K00_r_a
R:94 [ASN] 0:501 [G] r:53 [SER] a:495 [G] ❌ 7K00_r_a
R:93 [GLU] 0:494 [C] r:52 [GLU] a:488 [G] ❌ 7K00_r_a
R:135 [ALA] 0:2053 [G] r:95 [ARG] a:2012 [G] ❌ 7K00_r_a
R:15 [LYS] 0:502 [A] r:4 [ILE] a:496 [G] ❌ 7K00_r_a
R:102 [GLN] 0:502 [A] r:62 [ASP] a:496 [G] ❌ 7K00_r_a
R:23 [MET] 0:1370 [G] r:12 [SER] a:1266 [G] ❌ 7K00_r_a
R:127 [PRO] 0:841 [A] r:87 [PRO] a:748 [G] ❌ 7K00_r_a
R:24 [SER] 0:2052 [U] r:13 [SER] a:2011 [U] ❌ 7K00_r_a
R:29 [LYS] 0:525 [G] r:18 [ARG] a:519 [U] ❌ 7K00_r_a
R:125 [ARG] 0:1430 [G] r:85 [ILE] a:1324 [G] ❌ 7K00_r_a
R:123 [GLN] 0:1429 [U] r:83 [LYS] a:1323 [C] ❌ 7K00_r_a
R:22 [GLN] 0:2053 [G] r:11 [ARG] a:2012 [G] ❌ 1VQ8_R_0
R:27 [HIS] 0:2053 [G] r:16 [LYS] a:2012 [G] ❌ 1VQ8_R_0
R:27 [HIS] 0:2052 [U] r:16 [LYS] a:2011 [U] ❌ 1VQ8_R_0
R:115 [ALA] 0:20 [G] r:75 [PHE] a:23 [G] ❌ 1VQ8_R_0
R:117 [HIS] 0:523 [C] r:77 [ASP] a:517 [C] ❌ 1VQ8_R_0
R:118 [LYS] 0:523 [C] r:78 [GLU] a:517 [C] ❌ 1VQ8_R_0
R:19 [ARG] 0:22 [U] r:8 [ARG] a:25 [U] ❌ 1VQ8_R_0
R:125 [ARG] 0:1689 [A] r:85 [ILE] a:1614 [A] ❌ 1VQ8_R_0
R:126 [LYS] 0:1689 [A] r:86 [MET] a:1614 [A] ❌ 1VQ8_R_0
R:134 [SER] 0:840 [U] r:94 [ASP] a:747 [5MU] ❌ 1VQ8_R_0
R:137 [ASN] 0:1366 [C] r:97 [LEU] a:1262 [A] ❌ 1VQ8_R_0
R:138 [SER] 0:1428 [C] r:98 [LYS] a:1322 [A] ❌ 1VQ8_R_0
R:138 [SER] 0:1429 [U] r:98 [LYS] a:1323 [C] ❌ 1VQ8_R_0
R:138 [SER] 0:1430 [G] r:98 [LYS] a:1324 [G] ❌ 1VQ8_R_0
R:139 [PRO] 0:1366 [C] r:99 [ARG] a:1262 [A] ❌ 1VQ8_R_0
R:139 [PRO] 0:2054 [A] r:99 [ARG] a:2013 [A] ❌ 1VQ8_R_0
R:132 [ARG] 0:2056 [C] r:92 [ARG] a:2015 [A] ❌ 7K00_a:2015 no longer at interface
R:136 [TRP] 0:1373 [G] r:96 [ILE] a:1269 [A] ❌ 7K00_a:1269 no longer at interface
R:26 [LYS] 0:1368 [U] r:15 [GLN] a:1264 [A] ❌ 7K00_a:1264 no longer at interface
R:22 [GLN] 0:1427 [A] r:11 [ARG] a:1321 [A] ❌ 7K00_a:1321 no longer at interface
R:33 [ARG] 0:12 [U] r:22 [ASP] a:15 [G] ❌ 7K00_a:15 no longer at interface
R:122 [GLN] 0:1427 [A] r:82 [MET] a:1321 [A] ❌ 7K00_a:1321 no longer at interface
R:90 [ASP] 0:495 [A] r:49 [LYS] a:489 [G] ❌ 1VQ8_R:90, 1VQ8_0:495 no longer at interface
R:90 [ASP] 0:497 [A] r:49 [LYS] a:491 [G] ❌ 1VQ8_R:90, 1VQ8_0:497 no longer at interface
R:18 [LEU] 0:498 [A] r:7 [HIS] a:492 [A] ❌ 1VQ8_0:498 no longer at interface
R:118 [LYS] 0:522 [U] r:78 [GLU] a:516 [C] ❌ 1VQ8_0:522 no longer at interface
R:120 [GLY] 0:514 [G] r:80 [PRO] a:508 [A] ❌ 1VQ8_0:514 no longer at interface
R:120 [GLY] 0:23 [G] r:80 [PRO] a:26 [G] ❌ 1VQ8_0:23 no longer at interface
R:121 [GLU] 0:23 [G] r:81 [SER] a:26 [G] ❌ 1VQ8_R:121, 1VQ8_0:23 no longer at interface
R:123 [GLN] 0:1364 [G] r:83 [LYS] a:1260 [A] ❌ 1VQ8_0:1364 no longer at interface
R:123 [GLN] 0:1365 [C] r:83 [LYS] a:1261 [C] ❌ 1VQ8_0:1365 no longer at interface
R:20 [GLU] 0:514 [G] r:9 [HIS] a:508 [A] ❌ 1VQ8_R:20, 1VQ8_0:514 no longer at interface
R:130 [MET] 0:839 [C] r:90 [LYS] a:746 [PSU] ❌ 1VQ8_0:839 no longer at interface
R:135 [ALA] 0:1364 [G] r:95 [ARG] a:1260 [A] ❌ 1VQ8_0:1364 no longer at interface
R:135 [ALA] 0:1365 [C] r:95 [ARG] a:1261 [C] ❌ 1VQ8_0:1365 no longer at interface
R:138 [SER] 0:1432 [U] r:98 [LYS] a:1326 [U] ❌ 1VQ8_0:1432 no longer at interface
R:139 [PRO] 0:1365 [C] r:99 [ARG] a:1261 [C] ❌ 1VQ8_0:1365 no longer at interface
R:113 [HIS] 0:525 [G] r:73 [LYS] a:519 [U] ❌ 7K00_r:73 no longer at interface
R:25 [PHE] 0:523 [C] r:14 [ALA] a:517 [C] ❌ 7K00_r:14 no longer at interface
R:25 [PHE] 0:524 [A] r:14 [ALA] a:518 [G] ❌ 7K00_r:14 no longer at interface
R:25 [PHE] 0:1370 [G] r:14 [ALA] a:1266 [G] ❌ 7K00_r:14 no longer at interface
R:142 [ASP] 0:21 [G] r:102 [HIS] a:24 [G] ❌ 1VQ8_R:142 no longer at interface
R:142 [ASP] 0:22 [U] r:102 [HIS] a:25 [U] ❌ 1VQ8_R:142 no longer at interface
R:14 [ALA] 0:501 [G] r:3 [THR] a:495 [G] ❌ 1VQ8_R:14 no longer at interface
R:51 [ILE] 0:2050 [G] r:40 [ASN] a:2009 [A] ❌ 1VQ8_R:51 no longer at interface
R:51 [ILE] 0:2051 [G] r:40 [ASN] a:2010 [G] ❌ 1VQ8_R:51 no longer at interface
R:90 [ASP] 0:493 [U] r:49 [LYS] a:487 [C] ❌ 1VQ8_R:90 no longer at interface
R:90 [ASP] 0:494 [C] r:49 [LYS] a:488 [G] ❌ 1VQ8_R:90 no longer at interface
R:97 [GLY] 0:493 [U] r:56 [ALA] a:487 [C] ❌ 1VQ8_R:97 no longer at interface
R:97 [GLY] 0:492 [C] r:56 [ALA] a:486 [C] ❌ 1VQ8_R:97 no longer at interface
R:124 [GLY] 0:1429 [U] r:84 [ARG] a:1323 [C] ❌ 1VQ8_R:124 no longer at interface
R:124 [GLY] 0:1428 [C] r:84 [ARG] a:1322 [A] ❌ 1VQ8_R:124 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L22 0.91 2.03 0.26 0.9 0.9 0.83 0.79 0.72 0.60 0.33 0.53


Other pairs involving 1VQ8_R_0 or 7K00_r_a

Total number of entries: 16

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
6S0Z_Q_A 7K00_r_a 0.76 0.97 2.05 0.53 Ribosomal protein L22 Bacterial large subunit ribosomal RNA compare
1VQ8_R_0 7ASM_Q_A 0.76 0.9 1.52 0.28 Ribosomal protein L22 compare
1VQ8_R_0 6AZ3_T_1,2 0.76 0.8 1.5 0.28 Ribosomal protein L22 compare
1VQ8_R_0 6S0Z_Q_A 0.64 0.92 1.69 0.22 Ribosomal protein L22 compare
1VQ8_R_0 7O7Y_BP_B5,B8 0.80 0.94 1.51 0.35 Ribosomal protein L22 compare
1VQ8_R_0 6AZ3_T_5 0.69 0.88 1.88 0.07 Ribosomal protein L22 compare
1VQ8_R_0 4Y4O_1W_1A 0.70 0.92 1.91 0.22 Ribosomal protein L22 compare
1VQ8_R_0 7O9M_T_A 0.65 0.91 2.65 0.09 Ribosomal protein L22 compare
1VQ8_R_0 7RYG_R_A 0.74 0.92 1.5 0.29 Ribosomal protein L22 compare
1VQ8_R_0 1YHQ_R_0 0.99 1.0 0.18 0.98 Ribosomal protein L22 Archaeal large subunit ribosomal RNA compare
1VQ8_R_0 7K00_r_a 0.72 0.91 2.03 0.26 Ribosomal protein L22 compare
1VQ8_R_0 7OF0_T_A 0.67 0.93 2.73 0.09 Ribosomal protein L22 compare
1YHQ_R_0 7K00_r_a 0.71 0.91 1.91 0.26 Ribosomal protein L22 compare
4Y4O_1W_1A 7K00_r_a 0.92 0.97 0.75 0.63 Ribosomal protein L22 Bacterial large subunit ribosomal RNA compare
6AZ3_T_1,2 7K00_r_a 0.67 0.76 1.93 0.26 Ribosomal protein L22 compare
7ASM_Q_A 7K00_r_a 0.94 0.97 1.55 0.57 Ribosomal protein L22 Bacterial large subunit ribosomal RNA compare