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All interfaces > All interologs > Interface groups > group134 > 1YHQ_R_0 vs 6S0Z_Q_A

Interface analysis


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Common contacts -

1YHQ_R
1YHQ_0
6S0Z_Q
6S0Z_A
Conserved?
R:19 [ARG] 0:499 [G] Q:8 [ARG] A:538 [G] ✔
R:19 [ARG] 0:500 [G] Q:8 [ARG] A:539 [G] ✔
R:137 [ASN] 0:2053 [G] Q:95 [ASN] A:2039 [G] ✔
R:137 [ASN] 0:2054 [A] Q:95 [ASN] A:2040 [A] ✔
R:136 [TRP] 0:2053 [G] Q:94 [ILE] A:2039 [G] ✔
R:136 [TRP] 0:2054 [A] Q:94 [ILE] A:2040 [A] ✔
R:128 [ARG] 0:843 [A] Q:89 [GLY] A:795 [A] ✔
R:128 [ARG] 0:1689 [A] Q:89 [GLY] A:1658 [A] ✔
R:128 [ARG] 0:1690 [C] Q:89 [GLY] A:1659 [C] ✔
R:116 [ALA] 0:524 [A] Q:76 [ALA] A:563 [G] ✔
R:126 [LYS] 0:1373 [G] Q:86 [ARG] A:1307 [G] ✔
R:126 [LYS] 0:1431 [C] Q:86 [ARG] A:1362 [C] ✔
R:117 [HIS] 0:20 [G] Q:77 [ASN] A:23 [G] ✔
R:117 [HIS] 0:21 [G] Q:77 [ASN] A:24 [G] ✔
R:117 [HIS] 0:524 [A] Q:77 [ASN] A:563 [G] ✔
R:36 [LYS] 0:525 [G] Q:25 [ARG] A:564 [U] ✔
R:36 [LYS] 0:526 [U] Q:25 [ARG] A:565 [G] ✔
R:98 [ASN] 0:492 [C] Q:57 [ASN] A:532 [C] ✔
R:98 [ASN] 0:500 [G] Q:57 [ASN] A:539 [G] ✔
R:98 [ASN] 0:501 [G] Q:57 [ASN] A:540 [G] ✔
R:27 [HIS] 0:1370 [G] Q:16 [LYS] A:1304 [G] ✔
R:94 [ASN] 0:493 [U] Q:53 [SER] A:533 [C] ✔
R:94 [ASN] 0:499 [G] Q:53 [SER] A:538 [G] ✔
R:94 [ASN] 0:500 [G] Q:53 [SER] A:539 [G] ✔
R:26 [LYS] 0:1369 [A] Q:15 [ARG] A:1303 [A] ✔
R:26 [LYS] 0:1370 [G] Q:15 [ARG] A:1304 [G] ✔
R:133 [ALA] 0:1689 [A] Q:91 [ALA] A:1658 [A] ✔
R:22 [GLN] 0:1427 [A] Q:11 [ARG] A:1358 [A] ✔
R:22 [GLN] 0:1428 [C] Q:11 [ARG] A:1359 [A] ✔
R:93 [GLU] 0:493 [U] Q:52 [MET] A:533 [C] ✔
R:129 [ALA] 0:840 [U] Q:90 [ARG] A:792 [U] ✔
R:129 [ALA] 0:841 [A] Q:90 [ARG] A:793 [G] ✔
R:129 [ALA] 0:843 [A] Q:90 [ARG] A:795 [A] ✔
R:129 [ALA] 0:844 [A] Q:90 [ARG] A:796 [A] ✔
R:135 [ALA] 0:2054 [A] Q:93 [ALA] A:2040 [A] ✔
R:135 [ALA] 0:2055 [A] Q:93 [ALA] A:2041 [A] ✔
R:17 [MET] 0:499 [G] Q:6 [VAL] A:538 [G] ✔
R:17 [MET] 0:500 [G] Q:6 [VAL] A:539 [G] ✔
R:17 [MET] 0:501 [G] Q:6 [VAL] A:540 [G] ✔
R:15 [LYS] 0:500 [G] Q:4 [LYS] A:539 [G] ✔
R:15 [LYS] 0:501 [G] Q:4 [LYS] A:540 [G] ✔
R:139 [PRO] 0:2053 [G] Q:97 [ARG] A:2039 [G] ✔
R:114 [VAL] 0:525 [G] Q:74 [ALA] A:564 [U] ✔
R:102 [GLN] 0:501 [G] Q:62 [TYR] A:540 [G] ✔
R:102 [GLN] 0:502 [A] Q:62 [TYR] A:541 [G] ✔
R:23 [MET] 0:2052 [U] Q:12 [ILE] A:2038 [U] ✔
R:127 [PRO] 0:1689 [A] Q:87 [PRO] A:1658 [A] ✔
R:127 [PRO] 0:1690 [C] Q:87 [PRO] A:1659 [C] ✔
R:115 [ALA] 0:524 [A] Q:75 [TYR] A:563 [G] ✔
R:115 [ALA] 0:525 [G] Q:75 [TYR] A:564 [U] ✔
R:118 [LYS] 0:21 [G] Q:78 [GLU] A:24 [G] ✔
R:118 [LYS] 0:22 [U] Q:78 [GLU] A:25 [U] ✔
R:118 [LYS] 0:1366 [C] Q:78 [GLU] A:1300 [G] ✔
R:24 [SER] 0:1370 [G] Q:13 [ALA] A:1304 [G] ✔
R:122 [GLN] 0:1428 [C] Q:82 [LEU] A:1359 [A] ✔
R:82 [GLU] 0:2050 [G] Q:41 [LYS] A:2036 [G] ✔
R:82 [GLU] 0:2051 [G] Q:41 [LYS] A:2037 [G] ✔
R:18 [LEU] 0:499 [G] Q:7 [ALA] A:538 [G] ✔
R:138 [SER] 0:2052 [U] Q:96 [LYS] A:2038 [U] ✔
R:138 [SER] 0:2053 [G] Q:96 [LYS] A:2039 [G] ✔
R:134 [SER] 0:2054 [A] Q:92 [SER] A:2040 [A] ✔
R:101 [HIS] 0:491 [C] Q:60 [HIS] A:531 [C] ✔
R:101 [HIS] 0:492 [C] Q:60 [HIS] A:532 [C] ✔
R:101 [HIS] 0:501 [G] Q:60 [HIS] A:540 [G] ✔
R:83 [LYS] 0:2050 [G] Q:42 [ALA] A:2036 [G] ✔
R:83 [LYS] 0:2051 [G] Q:42 [ALA] A:2037 [G] ✔
R:83 [LYS] 0:2052 [U] Q:42 [ALA] A:2038 [U] ✔
R:120 [GLY] 0:22 [U] Q:80 [PRO] A:25 [U] ✔
R:29 [LYS] 0:523 [C] Q:18 [ARG] A:562 [C] ✔
R:29 [LYS] 0:524 [A] Q:18 [ARG] A:563 [G] ✔
R:16 [ALA] 0:500 [G] Q:5 [ALA] A:539 [G] ✔
R:16 [ALA] 0:501 [G] Q:5 [ALA] A:540 [G] ✔
R:119 [VAL] 0:21 [G] Q:79 [GLY] A:24 [G] ✔
R:119 [VAL] 0:22 [U] Q:79 [GLY] A:25 [U] ✔
R:136 [TRP] 0:1372 [A] Q:94 [ILE] A:1306 [A] ❌ 6S0Z_Q_A
R:136 [TRP] 0:1373 [G] Q:94 [ILE] A:1307 [G] ❌ 6S0Z_Q_A
R:136 [TRP] 0:1431 [C] Q:94 [ILE] A:1362 [C] ❌ 6S0Z_Q_A
R:136 [TRP] 0:2052 [U] Q:94 [ILE] A:2038 [U] ❌ 6S0Z_Q_A
R:128 [ARG] 0:840 [U] Q:89 [GLY] A:792 [U] ❌ 6S0Z_Q_A
R:128 [ARG] 0:841 [A] Q:89 [GLY] A:793 [G] ❌ 6S0Z_Q_A
R:128 [ARG] 0:844 [A] Q:89 [GLY] A:796 [A] ❌ 6S0Z_Q_A
R:128 [ARG] 0:1372 [A] Q:89 [GLY] A:1306 [A] ❌ 6S0Z_Q_A
R:128 [ARG] 0:2054 [A] Q:89 [GLY] A:2040 [A] ❌ 6S0Z_Q_A
R:128 [ARG] 0:2055 [A] Q:89 [GLY] A:2041 [A] ❌ 6S0Z_Q_A
R:27 [HIS] 0:2051 [G] Q:16 [LYS] A:2037 [G] ❌ 6S0Z_Q_A
R:94 [ASN] 0:501 [G] Q:53 [SER] A:540 [G] ❌ 6S0Z_Q_A
R:22 [GLN] 0:2052 [U] Q:11 [ARG] A:2038 [U] ❌ 6S0Z_Q_A
R:93 [GLU] 0:494 [C] Q:52 [MET] A:534 [G] ❌ 6S0Z_Q_A
R:135 [ALA] 0:2053 [G] Q:93 [ALA] A:2039 [G] ❌ 6S0Z_Q_A
R:15 [LYS] 0:502 [A] Q:4 [LYS] A:541 [G] ❌ 6S0Z_Q_A
R:139 [PRO] 0:1370 [G] Q:97 [ARG] A:1304 [G] ❌ 6S0Z_Q_A
R:23 [MET] 0:1370 [G] Q:12 [ILE] A:1304 [G] ❌ 6S0Z_Q_A
R:24 [SER] 0:2052 [U] Q:13 [ALA] A:2038 [U] ❌ 6S0Z_Q_A
R:122 [GLN] 0:1427 [A] Q:82 [LEU] A:1358 [A] ❌ 6S0Z_Q_A
R:122 [GLN] 0:1429 [U] Q:82 [LEU] A:1360 [G] ❌ 6S0Z_Q_A
R:121 [GLU] 0:2054 [A] Q:81 [THR] A:2040 [A] ❌ 6S0Z_Q_A
R:134 [SER] 0:2055 [A] Q:92 [SER] A:2041 [A] ❌ 6S0Z_Q_A
R:29 [LYS] 0:525 [G] Q:18 [ARG] A:564 [U] ❌ 6S0Z_Q_A
R:123 [GLN] 0:1429 [U] Q:83 [LYS] A:1360 [G] ❌ 6S0Z_Q_A
R:119 [VAL] 0:23 [G] Q:79 [GLY] A:26 [G] ❌ 6S0Z_Q_A
R:24 [SER] 0:2053 [G] Q:13 [ALA] A:2039 [G] ❌ 1YHQ_R_0
R:27 [HIS] 0:2052 [U] Q:16 [LYS] A:2038 [U] ❌ 1YHQ_R_0
R:27 [HIS] 0:2053 [G] Q:16 [LYS] A:2039 [G] ❌ 1YHQ_R_0
R:115 [ALA] 0:20 [G] Q:75 [TYR] A:23 [G] ❌ 1YHQ_R_0
R:117 [HIS] 0:523 [C] Q:77 [ASN] A:562 [C] ❌ 1YHQ_R_0
R:118 [LYS] 0:523 [C] Q:78 [GLU] A:562 [C] ❌ 1YHQ_R_0
R:120 [GLY] 0:23 [G] Q:80 [PRO] A:26 [G] ❌ 1YHQ_R_0
R:121 [GLU] 0:23 [G] Q:81 [THR] A:26 [G] ❌ 1YHQ_R_0
R:126 [LYS] 0:1689 [A] Q:86 [ARG] A:1658 [A] ❌ 1YHQ_R_0
R:126 [LYS] 0:2053 [G] Q:86 [ARG] A:2039 [G] ❌ 1YHQ_R_0
R:126 [LYS] 0:1372 [A] Q:86 [ARG] A:1306 [A] ❌ 1YHQ_R_0
R:126 [LYS] 0:2054 [A] Q:86 [ARG] A:2040 [A] ❌ 1YHQ_R_0
R:129 [ALA] 0:1689 [A] Q:90 [ARG] A:1658 [A] ❌ 1YHQ_R_0
R:138 [SER] 0:1429 [U] Q:96 [LYS] A:1360 [G] ❌ 1YHQ_R_0
R:139 [PRO] 0:1366 [C] Q:97 [ARG] A:1300 [G] ❌ 1YHQ_R_0
R:139 [PRO] 0:2054 [A] Q:97 [ARG] A:2040 [A] ❌ 1YHQ_R_0
R:128 [ARG] 0:2648 [U] Q:89 [GLY] A:2640 [U] ❌ 6S0Z_A:2640 no longer at interface
R:26 [LYS] 0:1368 [U] Q:15 [ARG] A:1302 [G] ❌ 6S0Z_A:1302 no longer at interface
R:33 [ARG] 0:12 [U] Q:22 [ASP] A:15 [G] ❌ 6S0Z_Q:22, 6S0Z_A:15 no longer at interface
R:83 [LYS] 0:1433 [G] Q:42 [ALA] A:1364 [C] ❌ 6S0Z_A:1364 no longer at interface
R:21 [ARG] 0:498 [A] Q:10 [ILE] A:537 [A] ❌ 1YHQ_R:21, 1YHQ_0:498 no longer at interface
R:22 [GLN] 0:514 [G] Q:11 [ARG] A:553 [A] ❌ 1YHQ_0:514 no longer at interface
R:90 [ASP] 0:495 [A] Q:49 [LYS] A:535 [G] ❌ 1YHQ_R:90, 1YHQ_0:495 no longer at interface
R:90 [ASP] 0:496 [G] Q:49 [LYS] A:536 [A] ❌ 1YHQ_R:90, 1YHQ_0:496 no longer at interface
R:18 [LEU] 0:498 [A] Q:7 [ALA] A:537 [A] ❌ 1YHQ_0:498 no longer at interface
R:118 [LYS] 0:522 [U] Q:78 [GLU] A:561 [C] ❌ 1YHQ_0:522 no longer at interface
R:120 [GLY] 0:514 [G] Q:80 [PRO] A:553 [A] ❌ 1YHQ_0:514 no longer at interface
R:121 [GLU] 0:1365 [C] Q:81 [THR] A:1299 [U] ❌ 1YHQ_0:1365 no longer at interface
R:122 [GLN] 0:514 [G] Q:82 [LEU] A:553 [A] ❌ 1YHQ_0:514 no longer at interface
R:123 [GLN] 0:1365 [C] Q:83 [LYS] A:1299 [U] ❌ 1YHQ_0:1365 no longer at interface
R:20 [GLU] 0:514 [G] Q:9 [THR] A:553 [A] ❌ 1YHQ_R:20, 1YHQ_0:514 no longer at interface
R:138 [SER] 0:1430 [G] Q:96 [LYS] A:1361 [G] ❌ 1YHQ_0:1430 no longer at interface
R:33 [ARG] 0:525 [G] Q:22 [ASP] A:564 [U] ❌ 6S0Z_Q:22 no longer at interface
R:113 [HIS] 0:525 [G] Q:73 [GLU] A:564 [U] ❌ 6S0Z_Q:73 no longer at interface
R:84 [ALA] 0:2051 [G] Q:43 [SER] A:2037 [G] ❌ 6S0Z_Q:43 no longer at interface
R:25 [PHE] 0:523 [C] Q:14 [PRO] A:562 [C] ❌ 6S0Z_Q:14 no longer at interface
R:25 [PHE] 0:524 [A] Q:14 [PRO] A:563 [G] ❌ 6S0Z_Q:14 no longer at interface
R:25 [PHE] 0:1370 [G] Q:14 [PRO] A:1304 [G] ❌ 6S0Z_Q:14 no longer at interface
R:142 [ASP] 0:21 [G] Q:100 [HIS] A:24 [G] ❌ 1YHQ_R:142 no longer at interface
R:142 [ASP] 0:22 [U] Q:100 [HIS] A:25 [U] ❌ 1YHQ_R:142 no longer at interface
R:51 [ILE] 0:2049 [C] Q:40 [ASN] A:2035 [C] ❌ 1YHQ_R:51 no longer at interface
R:51 [ILE] 0:2051 [G] Q:40 [ASN] A:2037 [G] ❌ 1YHQ_R:51 no longer at interface
R:51 [ILE] 0:2050 [G] Q:40 [ASN] A:2036 [G] ❌ 1YHQ_R:51 no longer at interface
R:90 [ASP] 0:494 [C] Q:49 [LYS] A:534 [G] ❌ 1YHQ_R:90 no longer at interface
R:90 [ASP] 0:493 [U] Q:49 [LYS] A:533 [C] ❌ 1YHQ_R:90 no longer at interface
R:97 [GLY] 0:493 [U] Q:56 [ALA] A:533 [C] ❌ 1YHQ_R:97 no longer at interface
R:97 [GLY] 0:492 [C] Q:56 [ALA] A:532 [C] ❌ 1YHQ_R:97 no longer at interface
R:124 [GLY] 0:1428 [C] Q:84 [ARG] A:1359 [A] ❌ 1YHQ_R:124 no longer at interface
R:124 [GLY] 0:1429 [U] Q:84 [ARG] A:1360 [G] ❌ 1YHQ_R:124 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L22 0.92 1.66 0.22 0.87 0.93 0.82 0.81 0.64 0.51 0.19 0.44


Other pairs involving 1YHQ_R_0 or 6S0Z_Q_A

Total number of entries: 20

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
6S0Z_Q_A 7K00_r_a 0.76 0.97 2.05 0.53 Ribosomal protein L22 Bacterial large subunit ribosomal RNA compare
6S0Z_Q_A 7ASM_Q_A 0.78 0.98 1.46 0.95 Ribosomal protein L22 Bacterial large subunit ribosomal RNA compare
6S0Z_Q_A 7O7Y_BP_B5,B8 0.58 0.89 1.75 0.2 Ribosomal protein L22 compare
6S0Z_Q_A 7OF0_T_A 0.56 0.93 2.75 0.22 Ribosomal protein L22 Bacterial large subunit ribosomal RNA compare
6S0Z_Q_A 7RYG_R_A 0.74 0.98 1.7 0.55 Ribosomal protein L22 Bacterial large subunit ribosomal RNA compare
6S0Z_Q_A 7O9M_T_A 0.61 0.91 1.8 0.2 Ribosomal protein L22 Bacterial large subunit ribosomal RNA compare
1VQ8_R_0 6S0Z_Q_A 0.64 0.92 1.69 0.22 Ribosomal protein L22 compare
1VQ8_R_0 1YHQ_R_0 0.99 1.0 0.18 0.98 Ribosomal protein L22 Archaeal large subunit ribosomal RNA compare
1YHQ_R_0 7ASM_Q_A 0.76 0.9 1.49 0.28 Ribosomal protein L22 compare
1YHQ_R_0 7RYG_R_A 0.74 0.92 1.41 0.29 Ribosomal protein L22 compare
1YHQ_R_0 4Y4O_1W_1A 0.70 0.92 1.84 0.22 Ribosomal protein L22 compare
1YHQ_R_0 6S0Z_Q_A 0.64 0.92 1.66 0.22 Ribosomal protein L22 compare
1YHQ_R_0 7O9M_T_A 0.64 0.91 2.58 0.09 Ribosomal protein L22 compare
1YHQ_R_0 7O7Y_BP_B5,B8 0.78 0.94 1.47 0.33 Ribosomal protein L22 compare
1YHQ_R_0 7K00_r_a 0.71 0.91 1.91 0.26 Ribosomal protein L22 compare
1YHQ_R_0 6AZ3_T_5 0.66 0.88 2.04 0.07 Ribosomal protein L22 compare
1YHQ_R_0 6AZ3_T_1,2 0.75 0.8 1.43 0.27 Ribosomal protein L22 compare
1YHQ_R_0 7OF0_T_A 0.65 0.93 2.63 0.09 Ribosomal protein L22 compare
4Y4O_1W_1A 6S0Z_Q_A 0.74 0.97 1.9 0.65 Ribosomal protein L22 Bacterial large subunit ribosomal RNA compare
6AZ3_T_1,2 6S0Z_Q_A 0.51 0.76 2.4 0.14 Ribosomal protein L22 compare