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All interfaces > All interologs > Interface groups > group134 > 7O7Y_BP_B5,B8

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Chain
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Conservation*

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Rim - Core

Contacts -

7O7Y_BP
7O7Y_B5,B8
Distance
Base Pair
Hbond nuc:res
Base Stacking
Residue conservation
BP:2 [VAL] B5:400 [A2M] 3.82 B5:391 [U] 29.05
BP:2 [VAL] B5:408 [A] 4.73 B5:404 [U] 29.05
BP:2 [VAL] B5:409 [G] 2.82 29.05
BP:3 [ARG] B5:409 [G] 3.19 base/AA stacks 33.4
BP:3 [ARG] B8:4819 [C] 2.83 B5:423 [G] 33.4
BP:3 [ARG] B8:4820 [G] 2.62 B5:422 [C] 33.4
BP:3 [ARG] B8:4821 [G] 4.6 B5:421 [C] 33.4
BP:4 [TYR] B5:399 [G] 3.93 B5:392 [U] 90.37
BP:4 [TYR] B5:400 [A2M] 3.1 B5:391 [U] 90.37
BP:4 [TYR] B8:4819 [C] 3.54 B5:423 [G] sugar:BB 90.37
BP:4 [TYR] B8:4820 [G] 3.91 B5:422 [C] 90.37
BP:5 [SER] B5:423 [G] 3.58 B8:4819 [C] 82.67
BP:5 [SER] B5:424 [U] 4.5 B8:4818 [G] 82.67
BP:5 [SER] B8:4818 [G] 4.15 B5:424 [U] 82.67
BP:5 [SER] B8:4819 [C] 2.69 B5:423 [G] sugar:BB 82.67
BP:5 [SER] B8:4820 [G] 3.52 B5:422 [C] 82.67
BP:6 [LEU] B5:424 [U] 4.04 B8:4818 [G] 0.0
BP:6 [LEU] B5:425 [U] 3.69 B8:4817 [A] 0.0
BP:6 [LEU] B8:4818 [G] 3.61 B5:424 [U] 0.0
BP:6 [LEU] B8:4819 [C] 4.49 B5:423 [G] 0.0
BP:16 [LYS] B5:399 [G] 4.36 B5:392 [U] 69.83
BP:16 [LYS] B5:400 [A2M] 3.48 B5:391 [U] 69.83
BP:16 [LYS] B5:401 [G] 4.24 B5:390 [C] 69.83
BP:17 [SER] B5:399 [G] 3.58 B5:392 [U] 89.11
BP:17 [SER] B5:400 [A2M] 4.51 B5:391 [U] 89.11
BP:18 [ARG] B5:398 [A2M] 3.14 B5:393 [U] 35.99
BP:18 [ARG] B5:399 [G] 3.17 B5:392 [U] sugar:BB 35.99
BP:18 [ARG] B5:400 [A2M] 3.31 B5:391 [U] 35.99
BP:18 [ARG] B8:4821 [G] 4.75 B5:421 [C] 35.99
BP:19 [GLY] B5:398 [A2M] 3.55 B5:393 [U] 34.45
BP:19 [GLY] B5:399 [G] 3.91 B5:392 [U] 34.45
BP:20 [SER] B5:398 [A2M] 3.16 B5:393 [U] 48.39
BP:20 [SER] B5:399 [G] 2.7 B5:392 [U] 48.39
BP:22 [LEU] B5:397 [G] 3.64 B5:394 [G] 49.17
BP:22 [LEU] B5:398 [A2M] 4.35 B5:393 [U] 49.17
BP:23 [ARG] B5:2261 [A] 3.16 65.97
BP:23 [ARG] B5:2262 [C] 2.79 B5:2270 [G] 65.97
BP:23 [ARG] B5:3590 [C] 4.08 B5:2207 [OMG] 65.97
BP:23 [ARG] B5:3591 [G] 4.9 B5:2206 [A2M] 65.97
BP:24 [VAL] B5:3590 [C] 4.63 B5:2207 [OMG] 84.14
BP:25 [HIS] B5:2204 [G] 2.95 B5:2205 [U] base/AA stacks 96.35
BP:25 [HIS] B5:3590 [C] 3.2 B5:2207 [OMG] 96.35
BP:25 [HIS] B5:3591 [G] 2.58 B5:2206 [A2M] 96.35
BP:26 [PHE] B5:422 [C] 3.6 B8:4820 [G] 52.7
BP:26 [PHE] B5:423 [G] 3.49 B8:4819 [C] 52.7
BP:26 [PHE] B5:2204 [G] 4.45 B5:2205 [U] 52.7
BP:27 [LYS] B5:2202 [U] 4.63 B5:3594 [A] 92.77
BP:27 [LYS] B5:2203 [A] 3.12 sugar:SC 92.77
BP:27 [LYS] B5:2204 [G] 2.54 B5:2205 [U] 92.77
BP:28 [ASN] B5:2204 [G] 3.48 B5:2205 [U] 68.82
BP:28 [ASN] B5:3589 [G] 4.23 B5:2208 [OMC] 68.82
BP:28 [ASN] B5:3590 [C] 4.91 B5:2207 [OMG] 68.82
BP:30 [ARG] B5:423 [G] 3.81 B8:4819 [C] 41.48
BP:30 [ARG] B5:424 [U] 2.78 B8:4818 [G] 41.48
BP:30 [ARG] B8:4812 [C] 3.36 B5:430 [G] 41.48
BP:34 [GLN] B5:423 [G] 4.94 B8:4819 [C] 40.49
BP:34 [GLN] B5:424 [U] 2.94 B8:4818 [G] 40.49
BP:37 [LYS] B5:424 [U] 4.37 B8:4818 [G] 76.12
BP:37 [LYS] B5:425 [U] 3.16 B8:4817 [A] 76.12
BP:43 [LYS] B5:4804 [U] 4.22 B5:4707 [A] 55.24
BP:43 [LYS] B5:4805 [U] 2.64 B5:4706 [A] 55.24
BP:46 [LYS] B5:4803 [G] 4.72 B5:4708 [C] 19.78
BP:46 [LYS] B5:4804 [U] 4.84 B5:4707 [A] 19.78
BP:50 [ASP] B5:4803 [G] 4.63 B5:4708 [C] 35.91
BP:54 [LYS] B5:3587 [C] 3.24 B5:2673 [G] sugar:SC 25.54
BP:55 [LYS] B5:4709 [C] 3.87 B5:4802 [G] sugar:BB 73.09
BP:55 [LYS] B5:4710 [A] 3.27 73.09
BP:55 [LYS] B5:4711 [PSU] 3.74 B5:4725 [G] 73.09
BP:56 [GLN] B5:4803 [G] 3.57 B5:4708 [C] 19.66
BP:56 [GLN] B5:4804 [U] 4.43 B5:4707 [A] 19.66
BP:61 [ARG] B5:3623 [A] 4.44 B5:4315 [U] 55.61
BP:61 [ARG] B8:4811 [A] 2.87 sugar:SC 55.61
BP:61 [ARG] B8:4812 [C] 3.67 B5:430 [G] 55.61
BP:62 [ARG] B5:422 [C] 4.89 B8:4820 [G] 77.39
BP:62 [ARG] B5:423 [G] 2.55 B8:4819 [C] 77.39
BP:62 [ARG] B5:424 [U] 2.91 B8:4818 [G] 77.39
BP:62 [ARG] B5:2204 [G] 4.81 B5:2205 [U] 77.39
BP:62 [ARG] B8:4812 [C] 4.0 B5:430 [G] 77.39
BP:62 [ARG] B8:4813 [U] 3.28 B5:429 [A] 77.39
BP:63 [TYR] B5:422 [C] 3.19 B8:4820 [G] 55.82
BP:63 [TYR] B5:423 [G] 2.81 B8:4819 [C] 55.82
BP:63 [TYR] B5:2201 [G] 4.9 B5:3595 [C] 55.82
BP:63 [TYR] B5:2204 [G] 3.27 B5:2205 [U] 55.82
BP:64 [ASN] B5:2204 [G] 3.79 B5:2205 [U] 63.23
BP:64 [ASN] B5:3623 [A] 3.33 B5:4315 [U] sugar:SC 63.23
BP:64 [ASN] B5:3624 [U] 3.27 B5:4314 [A] 63.23
BP:64 [ASN] B5:3625 [C] 4.25 B5:4313 [G] 63.23
BP:65 [GLY] B5:2203 [A] 4.05 51.31
BP:65 [GLY] B5:2204 [G] 2.86 B5:2205 [U] 51.31
BP:65 [GLY] B5:2205 [U] 3.34 B5:2204 [G] 51.31
BP:65 [GLY] B5:3625 [C] 3.84 B5:4313 [G] 51.31
BP:66 [GLY] B5:2205 [U] 3.57 B5:2204 [G] 62.11
BP:66 [GLY] B5:3586 [C] 4.91 B5:2674 [G] 62.11
BP:66 [GLY] B5:3624 [U] 4.43 B5:4314 [A] 62.11
BP:66 [GLY] B5:3625 [C] 2.76 B5:4313 [G] 62.11
BP:66 [GLY] B5:3626 [A] 4.5 B5:4312 [U] 62.11
BP:67 [VAL] B5:2204 [G] 4.41 B5:2205 [U] 61.84
BP:67 [VAL] B5:2205 [U] 3.96 B5:2204 [G] 61.84
BP:67 [VAL] B5:3587 [C] 4.16 B5:2673 [G] 61.84
BP:67 [VAL] B5:3624 [U] 4.58 B5:4314 [A] 61.84
BP:67 [VAL] B5:3625 [C] 3.86 B5:4313 [G] 61.84
BP:68 [GLY] B5:3586 [C] 3.91 B5:2674 [G] 68.77
BP:68 [GLY] B5:3587 [C] 3.0 B5:2673 [G] 68.77
BP:68 [GLY] B5:4719 [C] 4.79 68.77
BP:69 [ARG] B5:3624 [U] 3.6 B5:4314 [A] base:SC 95.37
BP:69 [ARG] B5:3625 [C] 3.4 B5:4313 [G] base/AA stacks 95.37
BP:69 [ARG] B5:4314 [A] 3.31 B5:3624 [U] base:SC, sugar:SC 95.37
BP:69 [ARG] B5:4315 [U] 3.55 B5:3623 [A] 95.37
BP:69 [ARG] B5:4718 [A] 3.81 95.37
BP:69 [ARG] B5:4719 [C] 2.82 base:SC, base:SC, sugar:BB 95.37
BP:69 [ARG] B5:4720 [G] 3.59 95.37
BP:70 [CYS] B5:4720 [G] 4.14 76.24
BP:71 [ALA] B5:4708 [C] 4.96 B5:4803 [G] 58.38
BP:71 [ALA] B5:4709 [C] 3.36 B5:4802 [G] 58.38
BP:71 [ALA] B5:4710 [A] 4.02 58.38
BP:71 [ALA] B5:4720 [G] 3.78 58.38
BP:71 [ALA] B5:4721 [A] 3.26 B5:4716 [A] 58.38
BP:72 [GLN] B5:4709 [C] 3.33 B5:4802 [G] 66.1
BP:72 [GLN] B5:4710 [A] 3.52 66.1
BP:74 [LYS] B5:4316 [G] 4.65 B5:3622 [A] 66.59
BP:74 [LYS] B5:4708 [C] 3.05 B5:4803 [G] 66.59
BP:74 [LYS] B5:4709 [C] 2.43 B5:4802 [G] 66.59
BP:74 [LYS] B5:4721 [A] 2.77 B5:4716 [A] 66.59
BP:74 [LYS] B5:4722 [C] 4.98 B5:4714 [G] 66.59
BP:75 [GLN] B5:4708 [C] 2.41 B5:4803 [G] sugar:SC 30.79
BP:75 [GLN] B5:4709 [C] 3.42 B5:4802 [G] 30.79
BP:75 [GLN] B5:4803 [G] 2.6 B5:4708 [C] base:SC 30.79
BP:75 [GLN] B5:4804 [U] 3.41 B5:4707 [A] 30.79
BP:77 [GLY] B8:4810 [G] 4.94 44.53
BP:78 [TRP] B5:3622 [A] 4.04 B5:4316 [G] 1.74
BP:78 [TRP] B5:3623 [A] 3.18 B5:4315 [U] 1.74
BP:78 [TRP] B8:4810 [G] 4.85 1.74
BP:78 [TRP] B8:4811 [A] 3.14 1.74
BP:78 [TRP] B8:4812 [C] 4.37 B5:430 [G] 1.74
BP:79 [THR] B5:3623 [A] 4.03 B5:4315 [U] 37.72
BP:79 [THR] B5:3624 [U] 4.75 B5:4314 [A] 37.72
BP:79 [THR] B5:4315 [U] 3.73 B5:3623 [A] 37.72
BP:79 [THR] B5:4316 [G] 3.68 B5:3622 [A] 37.72
BP:79 [THR] B5:4720 [G] 4.89 37.72
BP:80 [GLN] B5:3623 [A] 4.39 B5:4315 [U] 66.61
BP:80 [GLN] B5:3624 [U] 2.96 B5:4314 [A] 66.61
BP:80 [GLN] B5:3625 [C] 4.33 B5:4313 [G] 66.61
BP:81 [GLY] B5:3587 [C] 4.35 B5:2673 [G] 89.56
BP:82 [ARG] B5:2204 [G] 3.15 B5:2205 [U] sugar:SC 80.74
BP:82 [ARG] B5:2205 [U] 2.84 B5:2204 [G] 80.74
BP:82 [ARG] B5:3587 [C] 2.97 B5:2673 [G] 80.74
BP:82 [ARG] B5:3588 [A] 3.23 B5:2672 [U] 80.74
BP:83 [TRP] B5:3587 [C] 3.51 B5:2673 [G] 71.63
BP:83 [TRP] B5:3588 [A] 2.69 B5:2672 [U] 71.63
BP:83 [TRP] B5:3589 [G] 4.71 B5:2208 [OMC] 71.63
BP:84 [PRO] B5:3588 [A] 3.55 B5:2672 [U] 89.06
BP:84 [PRO] B5:3589 [G] 3.32 B5:2208 [OMC] 89.06
BP:85 [LYS] B5:3588 [A] 3.27 B5:2672 [U] 53.98
BP:85 [LYS] B5:3589 [G] 2.93 B5:2208 [OMC] 53.98
BP:86 [LYS] B5:2266 [A] 4.47 90.52
BP:86 [LYS] B5:3588 [A] 4.47 B5:2672 [U] 90.52
BP:86 [LYS] B5:3589 [G] 3.14 B5:2208 [OMC] 90.52
BP:86 [LYS] B5:3590 [C] 2.57 B5:2207 [OMG] 90.52
BP:87 [SER] B5:3589 [G] 4.31 B5:2208 [OMC] 85.98
BP:90 [PHE] B5:397 [G] 3.47 B5:394 [G] 5.05
BP:93 [HIS] B5:395 [A] 4.62 48.88
BP:93 [HIS] B5:396 [A] 3.82 48.88
BP:96 [LYS] B5:393 [U] 4.41 B5:398 [A2M] 53.87
BP:96 [LYS] B5:394 [G] 4.13 B5:397 [G] 53.87
BP:97 [ASN] B5:393 [U] 2.93 B5:398 [A2M] base:SC 89.79
BP:97 [ASN] B5:398 [A2M] 4.15 B5:393 [U] 89.79
BP:97 [ASN] B5:399 [G] 2.9 B5:392 [U] base:SC, sugar:SC 89.79
BP:97 [ASN] B5:400 [A2M] 4.67 B5:391 [U] 89.79
BP:100 [SER] B5:392 [U] 4.88 B5:399 [G] 77.46
BP:100 [SER] B5:393 [U] 3.37 B5:398 [A2M] 77.46
BP:100 [SER] B5:399 [G] 4.1 B5:392 [U] 77.46
BP:101 [ASN] B5:399 [G] 3.02 B5:392 [U] base:SC 95.62
BP:101 [ASN] B5:400 [A2M] 3.04 B5:391 [U] 95.62
BP:104 [LEU] B5:391 [U] 4.61 B5:400 [A2M] 35.41
BP:104 [LEU] B5:392 [U] 3.77 B5:399 [G] 35.41
BP:104 [LEU] B5:400 [A2M] 3.99 B5:391 [U] 35.41
BP:104 [LEU] B5:401 [G] 4.53 B5:390 [C] 35.41
BP:105 [LYS] B5:400 [A2M] 3.84 B5:391 [U] 76.23
BP:116 [HIS] B5:424 [U] 3.34 B8:4818 [G] 79.87
BP:117 [ILE] B5:424 [U] 4.17 B8:4818 [G] 74.01
BP:118 [GLN] B5:423 [G] 2.65 B8:4819 [C] base:SC 60.09
BP:118 [GLN] B5:424 [U] 3.49 B8:4818 [G] 60.09
BP:118 [GLN] B8:4819 [C] 4.99 B5:423 [G] 60.09
BP:118 [GLN] B8:4820 [G] 3.42 B5:422 [C] sugar:SC 60.09
BP:119 [VAL] B5:423 [G] 2.73 B8:4819 [C] sugar:BB 85.25
BP:120 [ASN] B5:422 [C] 4.37 B8:4820 [G] 71.97
BP:120 [ASN] B5:423 [G] 3.2 B8:4819 [C] 71.97
BP:120 [ASN] B8:4820 [G] 2.6 B5:422 [C] base:SC, base:SC, sugar:SC 71.97
BP:120 [ASN] B8:4821 [G] 3.43 B5:421 [C] 71.97
BP:121 [LYS] B5:421 [C] 4.57 B8:4821 [G] 67.4
BP:121 [LYS] B5:422 [C] 3.48 B8:4820 [G] 67.4
BP:121 [LYS] B5:2200 [G] 3.88 B5:3596 [C] 67.4
BP:121 [LYS] B5:2201 [G] 4.52 B5:3595 [C] 67.4
BP:121 [LYS] B8:4821 [G] 2.41 B5:421 [C] sugar:BB 67.4
BP:121 [LYS] B8:4822 [U] 3.54 B5:420 [A] 67.4
BP:122 [ALA] B8:4821 [G] 4.62 B5:421 [C] 85.32
BP:122 [ALA] B8:4822 [U] 4.1 B5:420 [A] 85.32
BP:123 [PRO] B8:4822 [U] 3.32 B5:420 [A] 38.16
BP:123 [PRO] B8:4823 [G] 3.62 B5:419 [A] 38.16
BP:124 [LYS] B5:3592 [A] 4.75 B5:4306 [C] 39.36
BP:124 [LYS] B8:4823 [G] 4.89 B5:419 [A] 39.36
BP:125 [MET] B5:2261 [A] 3.87 9.51
BP:125 [MET] B5:2262 [C] 4.13 B5:2270 [G] 9.51
BP:126 [ARG] B5:2262 [C] 4.83 B5:2270 [G] 53.53
BP:127 [ARG] B5:2262 [C] 3.56 B5:2270 [G] 84.21
BP:127 [ARG] B5:2263 [A] 2.94 B5:2269 [U] 84.21
BP:127 [ARG] B5:2264 [G] 3.61 84.21
BP:127 [ARG] B5:2265 [OMC] 3.25 84.21
BP:127 [ARG] B5:3590 [C] 3.29 B5:2207 [OMG] 84.21
BP:127 [ARG] B5:3591 [G] 3.27 B5:2206 [A2M] 84.21
BP:128 [ARG] B5:2264 [G] 4.74 40.53
BP:128 [ARG] B5:2637 [C] 3.65 40.53
BP:128 [ARG] B5:2638 [A] 3.67 40.53
BP:129 [THR] B5:2264 [G] 2.98 base:SC 47.97
BP:129 [THR] B5:3592 [A] 3.88 B5:4306 [C] 47.97
BP:130 [TYR] B5:1552 [G] 4.38 56.55
BP:130 [TYR] B5:1554 [A] 4.49 B5:1549 [C] 56.55
BP:130 [TYR] B5:2264 [G] 3.86 56.55
BP:130 [TYR] B5:2637 [C] 3.84 56.55
BP:130 [TYR] B5:2638 [A] 2.69 base/AA stacks 56.55
BP:131 [ARG] B5:1551 [U] 3.38 B5:3593 [A] 82.69
BP:131 [ARG] B5:1552 [G] 2.79 82.69
BP:131 [ARG] B5:1554 [A] 3.84 B5:1549 [C] 82.69
BP:131 [ARG] B5:1555 [A] 4.18 82.69
BP:131 [ARG] B5:2206 [A2M] 4.58 B5:3591 [G] 82.69
BP:131 [ARG] B5:2638 [A] 4.98 82.69
BP:131 [ARG] B5:3592 [A] 3.05 B5:4306 [C] base:SC 82.69
BP:131 [ARG] B5:3593 [A] 4.08 B5:1551 [U] 82.69
BP:132 [ALA] B5:1551 [U] 3.24 B5:3593 [A] 89.92
BP:132 [ALA] B5:1552 [G] 3.25 89.92
BP:132 [ALA] B5:1554 [A] 4.2 B5:1549 [C] 89.92
BP:132 [ALA] B5:1555 [A] 3.81 89.92
BP:133 [HIS] B5:1550 [G] 4.52 55.88
BP:133 [HIS] B5:1551 [U] 4.34 B5:3593 [A] 55.88
BP:133 [HIS] B5:1552 [G] 3.32 base:BB base/AA stacks 55.88
BP:133 [HIS] B5:1555 [A] 2.97 sugar:SC 55.88
BP:134 [GLY] B5:1555 [A] 3.11 88.12
BP:134 [GLY] B5:2637 [C] 3.13 base:BB 88.12
BP:135 [ARG] B5:1551 [U] 2.98 B5:3593 [A] sugar:SC 89.41
BP:135 [ARG] B5:2637 [C] 4.39 89.41
BP:135 [ARG] B5:3593 [A] 4.08 B5:1551 [U] 89.41
BP:136 [ILE] B5:2637 [C] 3.5 70.36
BP:137 [ASN] B5:1551 [U] 4.76 B5:3593 [A] 67.6
BP:137 [ASN] B5:3592 [A] 3.22 B5:4306 [C] 67.6
BP:137 [ASN] B5:3593 [A] 3.3 B5:1551 [U] 67.6
BP:138 [PRO] B5:3591 [G] 4.78 B5:2206 [A2M] 50.85
BP:138 [PRO] B5:3592 [A] 2.86 B5:4306 [C] sugar:BB 50.85
BP:138 [PRO] B5:3593 [A] 3.41 B5:1551 [U] 50.85
BP:139 [TYR] B5:2207 [OMG] 4.07 B5:3590 [C] 36.26
BP:139 [TYR] B5:2264 [G] 3.55 36.26
BP:139 [TYR] B5:3590 [C] 3.17 B5:2207 [OMG] sugar:SC 36.26
BP:139 [TYR] B5:3591 [G] 3.37 B5:2206 [A2M] 36.26
BP:139 [TYR] B5:3592 [A] 3.82 B5:4306 [C] 36.26
BP:140 [MET] B5:3591 [G] 3.14 B5:2206 [A2M] 29.27
BP:140 [MET] B5:3592 [A] 2.74 B5:4306 [C] 29.27
BP:141 [SER] B5:3591 [G] 3.13 B5:2206 [A2M] 66.04
BP:142 [SER] B5:2204 [G] 3.49 B5:2205 [U] 63.95
BP:142 [SER] B5:3591 [G] 4.71 B5:2206 [A2M] 63.95
BP:142 [SER] B5:3592 [A] 4.71 B5:4306 [C] 63.95
BP:145 [HIS] B8:4821 [G] 3.37 B5:421 [C] 88.53
BP:145 [HIS] B8:4822 [U] 3.16 B5:420 [A] 88.53
BP:147 [GLU] B8:4820 [G] 4.13 B5:422 [C] 78.2

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*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)

Properties of this interface

Interolog group ID Structure ID Structure description
UniProt ID
ECOD label(s)
RFAM label(s)
Is ribosome? RCSB PDB link
group134 7O7Y_BP_B5,B8 BP: Ul22, Oryctolagus cuniculus (natural) B5: 28s rRNA, Oryctolagus cuniculus (natural) B8: 5.8s rRNA, Oryctolagus cuniculus (natural) G1TVT6 Ribosomal protein L22 Eukaryotic large subunit ribosomal RNA & 5.8S ribosomal RNA

Interologs

Total number of interologs for this interface: 7