Interface analysis
Style
Protein
CartoonLicorice
Surface
RNA
CartoonLicorice
Surface
Color
ChainChain (with hetatm)
Chainbow
Hydrophobicity Electrostatics (surface only) Conservation*
View
Focus on
InterfaceRNA
Protein
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Show chains
Interface
show as licoriceshow Accessibility
Rim - Core
Contacts -
7O7Y_BP
|
7O7Y_B5,B8
|
Distance
|
Base Pair
|
Hbond nuc:res
|
Base Stacking
|
Residue conservation
|
---|---|---|---|---|---|---|
BP:2 [VAL] | B5:400 [A2M] | 3.82 | B5:391 [U] | 29.05 | ||
BP:2 [VAL] | B5:408 [A] | 4.73 | B5:404 [U] | 29.05 | ||
BP:2 [VAL] | B5:409 [G] | 2.82 | 29.05 | |||
BP:3 [ARG] | B5:409 [G] | 3.19 | base/AA stacks | 33.4 | ||
BP:3 [ARG] | B8:4819 [C] | 2.83 | B5:423 [G] | 33.4 | ||
BP:3 [ARG] | B8:4820 [G] | 2.62 | B5:422 [C] | 33.4 | ||
BP:3 [ARG] | B8:4821 [G] | 4.6 | B5:421 [C] | 33.4 | ||
BP:4 [TYR] | B5:399 [G] | 3.93 | B5:392 [U] | 90.37 | ||
BP:4 [TYR] | B5:400 [A2M] | 3.1 | B5:391 [U] | 90.37 | ||
BP:4 [TYR] | B8:4819 [C] | 3.54 | B5:423 [G] | sugar:BB | 90.37 | |
BP:4 [TYR] | B8:4820 [G] | 3.91 | B5:422 [C] | 90.37 | ||
BP:5 [SER] | B5:423 [G] | 3.58 | B8:4819 [C] | 82.67 | ||
BP:5 [SER] | B5:424 [U] | 4.5 | B8:4818 [G] | 82.67 | ||
BP:5 [SER] | B8:4818 [G] | 4.15 | B5:424 [U] | 82.67 | ||
BP:5 [SER] | B8:4819 [C] | 2.69 | B5:423 [G] | sugar:BB | 82.67 | |
BP:5 [SER] | B8:4820 [G] | 3.52 | B5:422 [C] | 82.67 | ||
BP:6 [LEU] | B5:424 [U] | 4.04 | B8:4818 [G] | 0.0 | ||
BP:6 [LEU] | B5:425 [U] | 3.69 | B8:4817 [A] | 0.0 | ||
BP:6 [LEU] | B8:4818 [G] | 3.61 | B5:424 [U] | 0.0 | ||
BP:6 [LEU] | B8:4819 [C] | 4.49 | B5:423 [G] | 0.0 | ||
BP:16 [LYS] | B5:399 [G] | 4.36 | B5:392 [U] | 69.83 | ||
BP:16 [LYS] | B5:400 [A2M] | 3.48 | B5:391 [U] | 69.83 | ||
BP:16 [LYS] | B5:401 [G] | 4.24 | B5:390 [C] | 69.83 | ||
BP:17 [SER] | B5:399 [G] | 3.58 | B5:392 [U] | 89.11 | ||
BP:17 [SER] | B5:400 [A2M] | 4.51 | B5:391 [U] | 89.11 | ||
BP:18 [ARG] | B5:398 [A2M] | 3.14 | B5:393 [U] | 35.99 | ||
BP:18 [ARG] | B5:399 [G] | 3.17 | B5:392 [U] | sugar:BB | 35.99 | |
BP:18 [ARG] | B5:400 [A2M] | 3.31 | B5:391 [U] | 35.99 | ||
BP:18 [ARG] | B8:4821 [G] | 4.75 | B5:421 [C] | 35.99 | ||
BP:19 [GLY] | B5:398 [A2M] | 3.55 | B5:393 [U] | 34.45 | ||
BP:19 [GLY] | B5:399 [G] | 3.91 | B5:392 [U] | 34.45 | ||
BP:20 [SER] | B5:398 [A2M] | 3.16 | B5:393 [U] | 48.39 | ||
BP:20 [SER] | B5:399 [G] | 2.7 | B5:392 [U] | 48.39 | ||
BP:22 [LEU] | B5:397 [G] | 3.64 | B5:394 [G] | 49.17 | ||
BP:22 [LEU] | B5:398 [A2M] | 4.35 | B5:393 [U] | 49.17 | ||
BP:23 [ARG] | B5:2261 [A] | 3.16 | 65.97 | |||
BP:23 [ARG] | B5:2262 [C] | 2.79 | B5:2270 [G] | 65.97 | ||
BP:23 [ARG] | B5:3590 [C] | 4.08 | B5:2207 [OMG] | 65.97 | ||
BP:23 [ARG] | B5:3591 [G] | 4.9 | B5:2206 [A2M] | 65.97 | ||
BP:24 [VAL] | B5:3590 [C] | 4.63 | B5:2207 [OMG] | 84.14 | ||
BP:25 [HIS] | B5:2204 [G] | 2.95 | B5:2205 [U] | base/AA stacks | 96.35 | |
BP:25 [HIS] | B5:3590 [C] | 3.2 | B5:2207 [OMG] | 96.35 | ||
BP:25 [HIS] | B5:3591 [G] | 2.58 | B5:2206 [A2M] | 96.35 | ||
BP:26 [PHE] | B5:422 [C] | 3.6 | B8:4820 [G] | 52.7 | ||
BP:26 [PHE] | B5:423 [G] | 3.49 | B8:4819 [C] | 52.7 | ||
BP:26 [PHE] | B5:2204 [G] | 4.45 | B5:2205 [U] | 52.7 | ||
BP:27 [LYS] | B5:2202 [U] | 4.63 | B5:3594 [A] | 92.77 | ||
BP:27 [LYS] | B5:2203 [A] | 3.12 | sugar:SC | 92.77 | ||
BP:27 [LYS] | B5:2204 [G] | 2.54 | B5:2205 [U] | 92.77 | ||
BP:28 [ASN] | B5:2204 [G] | 3.48 | B5:2205 [U] | 68.82 | ||
BP:28 [ASN] | B5:3589 [G] | 4.23 | B5:2208 [OMC] | 68.82 | ||
BP:28 [ASN] | B5:3590 [C] | 4.91 | B5:2207 [OMG] | 68.82 | ||
BP:30 [ARG] | B5:423 [G] | 3.81 | B8:4819 [C] | 41.48 | ||
BP:30 [ARG] | B5:424 [U] | 2.78 | B8:4818 [G] | 41.48 | ||
BP:30 [ARG] | B8:4812 [C] | 3.36 | B5:430 [G] | 41.48 | ||
BP:34 [GLN] | B5:423 [G] | 4.94 | B8:4819 [C] | 40.49 | ||
BP:34 [GLN] | B5:424 [U] | 2.94 | B8:4818 [G] | 40.49 | ||
BP:37 [LYS] | B5:424 [U] | 4.37 | B8:4818 [G] | 76.12 | ||
BP:37 [LYS] | B5:425 [U] | 3.16 | B8:4817 [A] | 76.12 | ||
BP:43 [LYS] | B5:4804 [U] | 4.22 | B5:4707 [A] | 55.24 | ||
BP:43 [LYS] | B5:4805 [U] | 2.64 | B5:4706 [A] | 55.24 | ||
BP:46 [LYS] | B5:4803 [G] | 4.72 | B5:4708 [C] | 19.78 | ||
BP:46 [LYS] | B5:4804 [U] | 4.84 | B5:4707 [A] | 19.78 | ||
BP:50 [ASP] | B5:4803 [G] | 4.63 | B5:4708 [C] | 35.91 | ||
BP:54 [LYS] | B5:3587 [C] | 3.24 | B5:2673 [G] | sugar:SC | 25.54 | |
BP:55 [LYS] | B5:4709 [C] | 3.87 | B5:4802 [G] | sugar:BB | 73.09 | |
BP:55 [LYS] | B5:4710 [A] | 3.27 | 73.09 | |||
BP:55 [LYS] | B5:4711 [PSU] | 3.74 | B5:4725 [G] | 73.09 | ||
BP:56 [GLN] | B5:4803 [G] | 3.57 | B5:4708 [C] | 19.66 | ||
BP:56 [GLN] | B5:4804 [U] | 4.43 | B5:4707 [A] | 19.66 | ||
BP:61 [ARG] | B5:3623 [A] | 4.44 | B5:4315 [U] | 55.61 | ||
BP:61 [ARG] | B8:4811 [A] | 2.87 | sugar:SC | 55.61 | ||
BP:61 [ARG] | B8:4812 [C] | 3.67 | B5:430 [G] | 55.61 | ||
BP:62 [ARG] | B5:422 [C] | 4.89 | B8:4820 [G] | 77.39 | ||
BP:62 [ARG] | B5:423 [G] | 2.55 | B8:4819 [C] | 77.39 | ||
BP:62 [ARG] | B5:424 [U] | 2.91 | B8:4818 [G] | 77.39 | ||
BP:62 [ARG] | B5:2204 [G] | 4.81 | B5:2205 [U] | 77.39 | ||
BP:62 [ARG] | B8:4812 [C] | 4.0 | B5:430 [G] | 77.39 | ||
BP:62 [ARG] | B8:4813 [U] | 3.28 | B5:429 [A] | 77.39 | ||
BP:63 [TYR] | B5:422 [C] | 3.19 | B8:4820 [G] | 55.82 | ||
BP:63 [TYR] | B5:423 [G] | 2.81 | B8:4819 [C] | 55.82 | ||
BP:63 [TYR] | B5:2201 [G] | 4.9 | B5:3595 [C] | 55.82 | ||
BP:63 [TYR] | B5:2204 [G] | 3.27 | B5:2205 [U] | 55.82 | ||
BP:64 [ASN] | B5:2204 [G] | 3.79 | B5:2205 [U] | 63.23 | ||
BP:64 [ASN] | B5:3623 [A] | 3.33 | B5:4315 [U] | sugar:SC | 63.23 | |
BP:64 [ASN] | B5:3624 [U] | 3.27 | B5:4314 [A] | 63.23 | ||
BP:64 [ASN] | B5:3625 [C] | 4.25 | B5:4313 [G] | 63.23 | ||
BP:65 [GLY] | B5:2203 [A] | 4.05 | 51.31 | |||
BP:65 [GLY] | B5:2204 [G] | 2.86 | B5:2205 [U] | 51.31 | ||
BP:65 [GLY] | B5:2205 [U] | 3.34 | B5:2204 [G] | 51.31 | ||
BP:65 [GLY] | B5:3625 [C] | 3.84 | B5:4313 [G] | 51.31 | ||
BP:66 [GLY] | B5:2205 [U] | 3.57 | B5:2204 [G] | 62.11 | ||
BP:66 [GLY] | B5:3586 [C] | 4.91 | B5:2674 [G] | 62.11 | ||
BP:66 [GLY] | B5:3624 [U] | 4.43 | B5:4314 [A] | 62.11 | ||
BP:66 [GLY] | B5:3625 [C] | 2.76 | B5:4313 [G] | 62.11 | ||
BP:66 [GLY] | B5:3626 [A] | 4.5 | B5:4312 [U] | 62.11 | ||
BP:67 [VAL] | B5:2204 [G] | 4.41 | B5:2205 [U] | 61.84 | ||
BP:67 [VAL] | B5:2205 [U] | 3.96 | B5:2204 [G] | 61.84 | ||
BP:67 [VAL] | B5:3587 [C] | 4.16 | B5:2673 [G] | 61.84 | ||
BP:67 [VAL] | B5:3624 [U] | 4.58 | B5:4314 [A] | 61.84 | ||
BP:67 [VAL] | B5:3625 [C] | 3.86 | B5:4313 [G] | 61.84 | ||
BP:68 [GLY] | B5:3586 [C] | 3.91 | B5:2674 [G] | 68.77 | ||
BP:68 [GLY] | B5:3587 [C] | 3.0 | B5:2673 [G] | 68.77 | ||
BP:68 [GLY] | B5:4719 [C] | 4.79 | 68.77 | |||
BP:69 [ARG] | B5:3624 [U] | 3.6 | B5:4314 [A] | base:SC | 95.37 | |
BP:69 [ARG] | B5:3625 [C] | 3.4 | B5:4313 [G] | base/AA stacks | 95.37 | |
BP:69 [ARG] | B5:4314 [A] | 3.31 | B5:3624 [U] | base:SC, sugar:SC | 95.37 | |
BP:69 [ARG] | B5:4315 [U] | 3.55 | B5:3623 [A] | 95.37 | ||
BP:69 [ARG] | B5:4718 [A] | 3.81 | 95.37 | |||
BP:69 [ARG] | B5:4719 [C] | 2.82 | base:SC, base:SC, sugar:BB | 95.37 | ||
BP:69 [ARG] | B5:4720 [G] | 3.59 | 95.37 | |||
BP:70 [CYS] | B5:4720 [G] | 4.14 | 76.24 | |||
BP:71 [ALA] | B5:4708 [C] | 4.96 | B5:4803 [G] | 58.38 | ||
BP:71 [ALA] | B5:4709 [C] | 3.36 | B5:4802 [G] | 58.38 | ||
BP:71 [ALA] | B5:4710 [A] | 4.02 | 58.38 | |||
BP:71 [ALA] | B5:4720 [G] | 3.78 | 58.38 | |||
BP:71 [ALA] | B5:4721 [A] | 3.26 | B5:4716 [A] | 58.38 | ||
BP:72 [GLN] | B5:4709 [C] | 3.33 | B5:4802 [G] | 66.1 | ||
BP:72 [GLN] | B5:4710 [A] | 3.52 | 66.1 | |||
BP:74 [LYS] | B5:4316 [G] | 4.65 | B5:3622 [A] | 66.59 | ||
BP:74 [LYS] | B5:4708 [C] | 3.05 | B5:4803 [G] | 66.59 | ||
BP:74 [LYS] | B5:4709 [C] | 2.43 | B5:4802 [G] | 66.59 | ||
BP:74 [LYS] | B5:4721 [A] | 2.77 | B5:4716 [A] | 66.59 | ||
BP:74 [LYS] | B5:4722 [C] | 4.98 | B5:4714 [G] | 66.59 | ||
BP:75 [GLN] | B5:4708 [C] | 2.41 | B5:4803 [G] | sugar:SC | 30.79 | |
BP:75 [GLN] | B5:4709 [C] | 3.42 | B5:4802 [G] | 30.79 | ||
BP:75 [GLN] | B5:4803 [G] | 2.6 | B5:4708 [C] | base:SC | 30.79 | |
BP:75 [GLN] | B5:4804 [U] | 3.41 | B5:4707 [A] | 30.79 | ||
BP:77 [GLY] | B8:4810 [G] | 4.94 | 44.53 | |||
BP:78 [TRP] | B5:3622 [A] | 4.04 | B5:4316 [G] | 1.74 | ||
BP:78 [TRP] | B5:3623 [A] | 3.18 | B5:4315 [U] | 1.74 | ||
BP:78 [TRP] | B8:4810 [G] | 4.85 | 1.74 | |||
BP:78 [TRP] | B8:4811 [A] | 3.14 | 1.74 | |||
BP:78 [TRP] | B8:4812 [C] | 4.37 | B5:430 [G] | 1.74 | ||
BP:79 [THR] | B5:3623 [A] | 4.03 | B5:4315 [U] | 37.72 | ||
BP:79 [THR] | B5:3624 [U] | 4.75 | B5:4314 [A] | 37.72 | ||
BP:79 [THR] | B5:4315 [U] | 3.73 | B5:3623 [A] | 37.72 | ||
BP:79 [THR] | B5:4316 [G] | 3.68 | B5:3622 [A] | 37.72 | ||
BP:79 [THR] | B5:4720 [G] | 4.89 | 37.72 | |||
BP:80 [GLN] | B5:3623 [A] | 4.39 | B5:4315 [U] | 66.61 | ||
BP:80 [GLN] | B5:3624 [U] | 2.96 | B5:4314 [A] | 66.61 | ||
BP:80 [GLN] | B5:3625 [C] | 4.33 | B5:4313 [G] | 66.61 | ||
BP:81 [GLY] | B5:3587 [C] | 4.35 | B5:2673 [G] | 89.56 | ||
BP:82 [ARG] | B5:2204 [G] | 3.15 | B5:2205 [U] | sugar:SC | 80.74 | |
BP:82 [ARG] | B5:2205 [U] | 2.84 | B5:2204 [G] | 80.74 | ||
BP:82 [ARG] | B5:3587 [C] | 2.97 | B5:2673 [G] | 80.74 | ||
BP:82 [ARG] | B5:3588 [A] | 3.23 | B5:2672 [U] | 80.74 | ||
BP:83 [TRP] | B5:3587 [C] | 3.51 | B5:2673 [G] | 71.63 | ||
BP:83 [TRP] | B5:3588 [A] | 2.69 | B5:2672 [U] | 71.63 | ||
BP:83 [TRP] | B5:3589 [G] | 4.71 | B5:2208 [OMC] | 71.63 | ||
BP:84 [PRO] | B5:3588 [A] | 3.55 | B5:2672 [U] | 89.06 | ||
BP:84 [PRO] | B5:3589 [G] | 3.32 | B5:2208 [OMC] | 89.06 | ||
BP:85 [LYS] | B5:3588 [A] | 3.27 | B5:2672 [U] | 53.98 | ||
BP:85 [LYS] | B5:3589 [G] | 2.93 | B5:2208 [OMC] | 53.98 | ||
BP:86 [LYS] | B5:2266 [A] | 4.47 | 90.52 | |||
BP:86 [LYS] | B5:3588 [A] | 4.47 | B5:2672 [U] | 90.52 | ||
BP:86 [LYS] | B5:3589 [G] | 3.14 | B5:2208 [OMC] | 90.52 | ||
BP:86 [LYS] | B5:3590 [C] | 2.57 | B5:2207 [OMG] | 90.52 | ||
BP:87 [SER] | B5:3589 [G] | 4.31 | B5:2208 [OMC] | 85.98 | ||
BP:90 [PHE] | B5:397 [G] | 3.47 | B5:394 [G] | 5.05 | ||
BP:93 [HIS] | B5:395 [A] | 4.62 | 48.88 | |||
BP:93 [HIS] | B5:396 [A] | 3.82 | 48.88 | |||
BP:96 [LYS] | B5:393 [U] | 4.41 | B5:398 [A2M] | 53.87 | ||
BP:96 [LYS] | B5:394 [G] | 4.13 | B5:397 [G] | 53.87 | ||
BP:97 [ASN] | B5:393 [U] | 2.93 | B5:398 [A2M] | base:SC | 89.79 | |
BP:97 [ASN] | B5:398 [A2M] | 4.15 | B5:393 [U] | 89.79 | ||
BP:97 [ASN] | B5:399 [G] | 2.9 | B5:392 [U] | base:SC, sugar:SC | 89.79 | |
BP:97 [ASN] | B5:400 [A2M] | 4.67 | B5:391 [U] | 89.79 | ||
BP:100 [SER] | B5:392 [U] | 4.88 | B5:399 [G] | 77.46 | ||
BP:100 [SER] | B5:393 [U] | 3.37 | B5:398 [A2M] | 77.46 | ||
BP:100 [SER] | B5:399 [G] | 4.1 | B5:392 [U] | 77.46 | ||
BP:101 [ASN] | B5:399 [G] | 3.02 | B5:392 [U] | base:SC | 95.62 | |
BP:101 [ASN] | B5:400 [A2M] | 3.04 | B5:391 [U] | 95.62 | ||
BP:104 [LEU] | B5:391 [U] | 4.61 | B5:400 [A2M] | 35.41 | ||
BP:104 [LEU] | B5:392 [U] | 3.77 | B5:399 [G] | 35.41 | ||
BP:104 [LEU] | B5:400 [A2M] | 3.99 | B5:391 [U] | 35.41 | ||
BP:104 [LEU] | B5:401 [G] | 4.53 | B5:390 [C] | 35.41 | ||
BP:105 [LYS] | B5:400 [A2M] | 3.84 | B5:391 [U] | 76.23 | ||
BP:116 [HIS] | B5:424 [U] | 3.34 | B8:4818 [G] | 79.87 | ||
BP:117 [ILE] | B5:424 [U] | 4.17 | B8:4818 [G] | 74.01 | ||
BP:118 [GLN] | B5:423 [G] | 2.65 | B8:4819 [C] | base:SC | 60.09 | |
BP:118 [GLN] | B5:424 [U] | 3.49 | B8:4818 [G] | 60.09 | ||
BP:118 [GLN] | B8:4819 [C] | 4.99 | B5:423 [G] | 60.09 | ||
BP:118 [GLN] | B8:4820 [G] | 3.42 | B5:422 [C] | sugar:SC | 60.09 | |
BP:119 [VAL] | B5:423 [G] | 2.73 | B8:4819 [C] | sugar:BB | 85.25 | |
BP:120 [ASN] | B5:422 [C] | 4.37 | B8:4820 [G] | 71.97 | ||
BP:120 [ASN] | B5:423 [G] | 3.2 | B8:4819 [C] | 71.97 | ||
BP:120 [ASN] | B8:4820 [G] | 2.6 | B5:422 [C] | base:SC, base:SC, sugar:SC | 71.97 | |
BP:120 [ASN] | B8:4821 [G] | 3.43 | B5:421 [C] | 71.97 | ||
BP:121 [LYS] | B5:421 [C] | 4.57 | B8:4821 [G] | 67.4 | ||
BP:121 [LYS] | B5:422 [C] | 3.48 | B8:4820 [G] | 67.4 | ||
BP:121 [LYS] | B5:2200 [G] | 3.88 | B5:3596 [C] | 67.4 | ||
BP:121 [LYS] | B5:2201 [G] | 4.52 | B5:3595 [C] | 67.4 | ||
BP:121 [LYS] | B8:4821 [G] | 2.41 | B5:421 [C] | sugar:BB | 67.4 | |
BP:121 [LYS] | B8:4822 [U] | 3.54 | B5:420 [A] | 67.4 | ||
BP:122 [ALA] | B8:4821 [G] | 4.62 | B5:421 [C] | 85.32 | ||
BP:122 [ALA] | B8:4822 [U] | 4.1 | B5:420 [A] | 85.32 | ||
BP:123 [PRO] | B8:4822 [U] | 3.32 | B5:420 [A] | 38.16 | ||
BP:123 [PRO] | B8:4823 [G] | 3.62 | B5:419 [A] | 38.16 | ||
BP:124 [LYS] | B5:3592 [A] | 4.75 | B5:4306 [C] | 39.36 | ||
BP:124 [LYS] | B8:4823 [G] | 4.89 | B5:419 [A] | 39.36 | ||
BP:125 [MET] | B5:2261 [A] | 3.87 | 9.51 | |||
BP:125 [MET] | B5:2262 [C] | 4.13 | B5:2270 [G] | 9.51 | ||
BP:126 [ARG] | B5:2262 [C] | 4.83 | B5:2270 [G] | 53.53 | ||
BP:127 [ARG] | B5:2262 [C] | 3.56 | B5:2270 [G] | 84.21 | ||
BP:127 [ARG] | B5:2263 [A] | 2.94 | B5:2269 [U] | 84.21 | ||
BP:127 [ARG] | B5:2264 [G] | 3.61 | 84.21 | |||
BP:127 [ARG] | B5:2265 [OMC] | 3.25 | 84.21 | |||
BP:127 [ARG] | B5:3590 [C] | 3.29 | B5:2207 [OMG] | 84.21 | ||
BP:127 [ARG] | B5:3591 [G] | 3.27 | B5:2206 [A2M] | 84.21 | ||
BP:128 [ARG] | B5:2264 [G] | 4.74 | 40.53 | |||
BP:128 [ARG] | B5:2637 [C] | 3.65 | 40.53 | |||
BP:128 [ARG] | B5:2638 [A] | 3.67 | 40.53 | |||
BP:129 [THR] | B5:2264 [G] | 2.98 | base:SC | 47.97 | ||
BP:129 [THR] | B5:3592 [A] | 3.88 | B5:4306 [C] | 47.97 | ||
BP:130 [TYR] | B5:1552 [G] | 4.38 | 56.55 | |||
BP:130 [TYR] | B5:1554 [A] | 4.49 | B5:1549 [C] | 56.55 | ||
BP:130 [TYR] | B5:2264 [G] | 3.86 | 56.55 | |||
BP:130 [TYR] | B5:2637 [C] | 3.84 | 56.55 | |||
BP:130 [TYR] | B5:2638 [A] | 2.69 | base/AA stacks | 56.55 | ||
BP:131 [ARG] | B5:1551 [U] | 3.38 | B5:3593 [A] | 82.69 | ||
BP:131 [ARG] | B5:1552 [G] | 2.79 | 82.69 | |||
BP:131 [ARG] | B5:1554 [A] | 3.84 | B5:1549 [C] | 82.69 | ||
BP:131 [ARG] | B5:1555 [A] | 4.18 | 82.69 | |||
BP:131 [ARG] | B5:2206 [A2M] | 4.58 | B5:3591 [G] | 82.69 | ||
BP:131 [ARG] | B5:2638 [A] | 4.98 | 82.69 | |||
BP:131 [ARG] | B5:3592 [A] | 3.05 | B5:4306 [C] | base:SC | 82.69 | |
BP:131 [ARG] | B5:3593 [A] | 4.08 | B5:1551 [U] | 82.69 | ||
BP:132 [ALA] | B5:1551 [U] | 3.24 | B5:3593 [A] | 89.92 | ||
BP:132 [ALA] | B5:1552 [G] | 3.25 | 89.92 | |||
BP:132 [ALA] | B5:1554 [A] | 4.2 | B5:1549 [C] | 89.92 | ||
BP:132 [ALA] | B5:1555 [A] | 3.81 | 89.92 | |||
BP:133 [HIS] | B5:1550 [G] | 4.52 | 55.88 | |||
BP:133 [HIS] | B5:1551 [U] | 4.34 | B5:3593 [A] | 55.88 | ||
BP:133 [HIS] | B5:1552 [G] | 3.32 | base:BB | base/AA stacks | 55.88 | |
BP:133 [HIS] | B5:1555 [A] | 2.97 | sugar:SC | 55.88 | ||
BP:134 [GLY] | B5:1555 [A] | 3.11 | 88.12 | |||
BP:134 [GLY] | B5:2637 [C] | 3.13 | base:BB | 88.12 | ||
BP:135 [ARG] | B5:1551 [U] | 2.98 | B5:3593 [A] | sugar:SC | 89.41 | |
BP:135 [ARG] | B5:2637 [C] | 4.39 | 89.41 | |||
BP:135 [ARG] | B5:3593 [A] | 4.08 | B5:1551 [U] | 89.41 | ||
BP:136 [ILE] | B5:2637 [C] | 3.5 | 70.36 | |||
BP:137 [ASN] | B5:1551 [U] | 4.76 | B5:3593 [A] | 67.6 | ||
BP:137 [ASN] | B5:3592 [A] | 3.22 | B5:4306 [C] | 67.6 | ||
BP:137 [ASN] | B5:3593 [A] | 3.3 | B5:1551 [U] | 67.6 | ||
BP:138 [PRO] | B5:3591 [G] | 4.78 | B5:2206 [A2M] | 50.85 | ||
BP:138 [PRO] | B5:3592 [A] | 2.86 | B5:4306 [C] | sugar:BB | 50.85 | |
BP:138 [PRO] | B5:3593 [A] | 3.41 | B5:1551 [U] | 50.85 | ||
BP:139 [TYR] | B5:2207 [OMG] | 4.07 | B5:3590 [C] | 36.26 | ||
BP:139 [TYR] | B5:2264 [G] | 3.55 | 36.26 | |||
BP:139 [TYR] | B5:3590 [C] | 3.17 | B5:2207 [OMG] | sugar:SC | 36.26 | |
BP:139 [TYR] | B5:3591 [G] | 3.37 | B5:2206 [A2M] | 36.26 | ||
BP:139 [TYR] | B5:3592 [A] | 3.82 | B5:4306 [C] | 36.26 | ||
BP:140 [MET] | B5:3591 [G] | 3.14 | B5:2206 [A2M] | 29.27 | ||
BP:140 [MET] | B5:3592 [A] | 2.74 | B5:4306 [C] | 29.27 | ||
BP:141 [SER] | B5:3591 [G] | 3.13 | B5:2206 [A2M] | 66.04 | ||
BP:142 [SER] | B5:2204 [G] | 3.49 | B5:2205 [U] | 63.95 | ||
BP:142 [SER] | B5:3591 [G] | 4.71 | B5:2206 [A2M] | 63.95 | ||
BP:142 [SER] | B5:3592 [A] | 4.71 | B5:4306 [C] | 63.95 | ||
BP:145 [HIS] | B8:4821 [G] | 3.37 | B5:421 [C] | 88.53 | ||
BP:145 [HIS] | B8:4822 [U] | 3.16 | B5:420 [A] | 88.53 | ||
BP:147 [GLU] | B8:4820 [G] | 4.13 | B5:422 [C] | 78.2 |
*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)
Properties of this interface
Interolog group ID | Structure ID |
Structure description |
UniProt ID |
ECOD label(s) |
RFAM label(s) |
Is ribosome? | RCSB PDB link |
---|---|---|---|---|---|---|---|
group134 | 7O7Y_BP_B5,B8 | BP: Ul22, Oryctolagus cuniculus (natural) B5: 28s rRNA, Oryctolagus cuniculus (natural) B8: 5.8s rRNA, Oryctolagus cuniculus (natural) | G1TVT6 | Ribosomal protein L22 | Eukaryotic large subunit ribosomal RNA & 5.8S ribosomal RNA | ✔ |
Interologs
Total number of interologs for this interface: 7
Interface 1 | Interface 2 |
Percentage conservation |
Interface TM-score |
Interface RMSD |
Percentage identity |
Common ECOD label(s) |
Common RFAM label(s) |
Explore both interfaces |
---|---|---|---|---|---|---|---|---|
6S0Z_Q_A | 7O7Y_BP_B5,B8 | 0.58 | 0.89 | 1.75 | 0.2 | Ribosomal protein L22 | compare | |
4Y4O_1W_1A | 7O7Y_BP_B5,B8 | 0.70 | 0.9 | 1.56 | 0.24 | Ribosomal protein L22 | compare | |
7ASM_Q_A | 7O7Y_BP_B5,B8 | 0.72 | 0.89 | 1.69 | 0.25 | Ribosomal protein L22 | compare | |
1YHQ_R_0 | 7O7Y_BP_B5,B8 | 0.78 | 0.94 | 1.47 | 0.33 | Ribosomal protein L22 | compare | |
1VQ8_R_0 | 7O7Y_BP_B5,B8 | 0.80 | 0.94 | 1.51 | 0.35 | Ribosomal protein L22 | compare | |
6AZ3_T_5 | 7O7Y_BP_B5,B8 | 0.83 | 0.96 | 0.66 | 0.57 | Ribosomal protein L22 | compare | |
6AZ3_T_1,2 | 7O7Y_BP_B5,B8 | 0.90 | 0.93 | 0.97 | 0.55 | Ribosomal protein L22 | Eukaryotic large subunit ribosomal RNA | compare |