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All interfaces > All interologs > Interface groups > group135 > 3I61_A_B vs 5JB2_A_X,Y

Interface analysis


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Common contacts -

3I61_A
3I61_B
5JB2_A
5JB2_X,Y
Conserved?
A:407 [HIS] B:5 [U] A:402 [THR] Y:18 [U] ✔
A:384 [LYS] B:4 [U] A:376 [GLN] Y:17 [G] ✔
A:242 [THR] B:6 [U] A:103 [THR] Y:19 [A] ✔
A:242 [THR] B:7 [U] A:103 [THR] Y:20 [C] ✔
A:219 [VAL] B:7 [U] A:81 [SER] Y:20 [C] ✔
A:191 [ASP] B:6 [U] A:58 [HIS] Y:19 [A] ✔
A:435 [VAL] B:4 [U] A:438 [VAL] Y:17 [G] ✔
A:435 [VAL] B:5 [U] A:438 [VAL] Y:18 [U] ✔
A:435 [VAL] B:6 [U] A:438 [VAL] Y:19 [A] ✔
A:381 [PRO] B:4 [U] A:373 [LYS] Y:17 [G] ✔
A:408 [GLY] B:5 [U] A:403 [GLY] Y:18 [U] ✔
A:408 [GLY] B:6 [U] A:403 [GLY] Y:19 [A] ✔
A:188 [PRO] B:5 [U] A:55 [ASN] Y:18 [U] ✔
A:188 [PRO] B:6 [U] A:55 [ASN] Y:19 [A] ✔
A:383 [VAL] B:4 [U] A:375 [ARG] Y:17 [G] ✔
A:383 [VAL] B:5 [U] A:375 [ARG] Y:18 [U] ✔
A:189 [THR] B:5 [U] A:56 [LYS] Y:18 [U] ✔
A:189 [THR] B:6 [U] A:56 [LYS] Y:19 [A] ✔
A:220 [GLY] B:7 [U] A:82 [GLY] Y:20 [C] ✔
A:220 [GLY] B:8 [U] A:82 [GLY] Y:21 [C] ✔
A:382 [THR] B:3 [U] A:374 [THR] Y:16 [C] ✔
A:382 [THR] B:4 [U] A:374 [THR] Y:17 [G] ✔
A:245 [ARG] B:7 [U] A:106 [ILE] Y:20 [C] ✔
A:245 [ARG] B:8 [U] A:106 [ILE] Y:21 [C] ✔
A:190 [ARG] B:6 [U] A:57 [VAL] Y:19 [A] ✔
A:190 [ARG] B:7 [U] A:57 [VAL] Y:20 [C] ✔
A:415 [ARG] B:6 [U] A:418 [GLN] Y:19 [A] ✔
A:248 [ASP] B:7 [U] A:109 [ASN] Y:20 [C] ✔
A:248 [ASP] B:8 [U] A:109 [ASN] Y:21 [C] ✔
A:433 [THR] B:4 [U] A:436 [THR] Y:17 [G] ✔
A:433 [THR] B:5 [U] A:436 [THR] Y:18 [U] ✔
A:244 [GLY] B:6 [U] A:105 [GLN] Y:19 [A] ✔
A:244 [GLY] B:7 [U] A:105 [GLN] Y:20 [C] ✔
A:434 [ASP] B:4 [U] A:437 [SER] Y:17 [G] ✔
A:434 [ASP] B:5 [U] A:437 [SER] Y:18 [U] ✔
A:384 [LYS] B:2 [U] A:376 [GLN] Y:15 [A] ❌ 5JB2_A_X,Y
A:384 [LYS] B:3 [U] A:376 [GLN] Y:16 [C] ❌ 5JB2_A_X,Y
A:276 [GLY] B:6 [U] A:140 [ALA] Y:19 [A] ❌ 5JB2_A_X,Y
A:280 [ASP] B:6 [U] A:144 [LYS] Y:19 [A] ❌ 5JB2_A_X,Y
A:277 [PHE] B:5 [U] A:141 [VAL] Y:18 [U] ❌ 5JB2_A_X,Y
A:277 [PHE] B:6 [U] A:141 [VAL] Y:19 [A] ❌ 5JB2_A_X,Y
A:245 [ARG] B:6 [U] A:106 [ILE] Y:19 [A] ❌ 5JB2_A_X,Y
A:224 [PHE] B:7 [U] A:85 [SER] Y:20 [C] ❌ 5JB2_A_X,Y
A:190 [ARG] B:5 [U] A:57 [VAL] Y:18 [U] ❌ 5JB2_A_X,Y
A:190 [ARG] B:8 [U] A:57 [VAL] Y:21 [C] ❌ 5JB2_A_X,Y
A:415 [ARG] B:5 [U] A:418 [GLN] Y:18 [U] ❌ 5JB2_A_X,Y
A:455 [SER] B:4 [U] A:458 [THR] Y:17 [G] ❌ 5JB2_A_X,Y
A:381 [PRO] B:3 [U] A:373 [LYS] Y:16 [C] ❌ 3I61_A_B
A:381 [PRO] B:2 [U] A:373 [LYS] Y:15 [A] ❌ 3I61_A_B
A:383 [VAL] B:3 [U] A:375 [ARG] Y:16 [C] ❌ 3I61_A_B
A:224 [PHE] B:8 [U] A:85 [SER] Y:21 [C] ❌ 3I61_A_B
A:409 [LYS] B:4 [U] A:412 [GLY] Y:17 [G] ❌ 5JB2_A:412 no longer at interface
A:243 [PRO] B:6 [U] A:104 [ALA] Y:19 [A] ❌ 5JB2_A:104 no longer at interface
A:243 [PRO] B:7 [U] A:104 [ALA] Y:20 [C] ❌ 5JB2_A:104 no longer at interface
A:271 [ARG] B:4 [U] A:135 [HIS] Y:17 [G] ❌ 5JB2_A:135 no longer at interface
A:271 [ARG] B:5 [U] A:135 [HIS] Y:18 [U] ❌ 5JB2_A:135 no longer at interface
A:222 [THR] B:8 [U] A:83 [ASP] Y:21 [C] ❌ 5JB2_A:83 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
P-loop containing nucleoside triphosphate hydrolases 0.61 2.03 0.10 0.61 0.11 0.56 0.7 0.77 0.65 0.38 0.27


Other pairs involving 3I61_A_B or 5JB2_A_X,Y

Total number of entries: 13

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
3I62_A_B 5JB2_A_X,Y 0.80 0.61 2.0 0.1 P-loop containing nucleoside triphosphate hydrolases compare
2YKG_A_C,D 5JB2_A_X,Y 0.60 0.72 2.5 0.33 P-loop containing nucleoside triphosphate hydrolases & Helical bundle in Hef helicase & Mss4-like compare
5JAJ_A_X,Y 5JB2_A_X,Y 0.97 1.0 0.28 0.9 P-loop containing nucleoside triphosphate hydrolases & Helical bundle in Hef helicase & Mss4-like compare
3OG8_A_C,D 5JB2_A_X,Y 0.51 0.75 1.43 0.2 Mss4-like compare
3I61_A_B 5JB2_A_X,Y 0.77 0.61 2.03 0.1 P-loop containing nucleoside triphosphate hydrolases compare
3I61_A_B 3I62_A_B 0.99 1.0 0.16 0.98 P-loop containing nucleoside triphosphate hydrolases compare
3ZD7_A_C,D 5JB2_A_X,Y 0.39 0.73 3.99 0.31 P-loop containing nucleoside triphosphate hydrolases & Helical bundle in Hef helicase & Mss4-like compare
5JB2_A_X,Y 5JBG_A_X 0.92 0.99 0.88 0.62 P-loop containing nucleoside triphosphate hydrolases & Helical bundle in Hef helicase & Mss4-like compare
5JB2_A_X,Y 5ZC9_A_B 0.66 0.77 2.13 0.2 P-loop containing nucleoside triphosphate hydrolases compare
3I5X_A_B 3I61_A_B 0.99 1.0 0.13 1.0 P-loop containing nucleoside triphosphate hydrolases compare
3I5X_A_B 5JB2_A_X,Y 0.79 0.61 2.02 0.1 P-loop containing nucleoside triphosphate hydrolases compare
3I5Y_A_B 3I61_A_B 0.99 1.0 0.2 0.9 P-loop containing nucleoside triphosphate hydrolases compare
3I5Y_A_B 5JB2_A_X,Y 0.80 0.61 1.92 0.1 P-loop containing nucleoside triphosphate hydrolases compare