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All interfaces > All interologs > Interface groups > group135 > 3OG8_A_C,D vs 5JB2_A_X,Y

Interface analysis


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Common contacts -

3OG8_A
3OG8_C,D
5JB2_A
5JB2_X,Y
Conserved?
A:889 [ILE] C:2 [G] A:633 [ILE] X:3 [U] ✔
A:908 [TRP] C:1 [G] A:650 [TRP] X:2 [G] ✔
A:908 [TRP] C:2 [G] A:650 [TRP] X:3 [U] ✔
A:886 [VAL] C:1 [G] A:630 [ILE] X:2 [G] ✔
A:875 [ILE] C:1 [G] A:619 [MET] X:2 [G] ✔
A:906 [SER] D:20 [G] A:648 [LYS] Y:14 [U] ✔
A:888 [LYS] C:1 [G] A:632 [SER] X:2 [G] ✔
A:888 [LYS] C:2 [G] A:632 [SER] X:3 [U] ✔
A:830 [HIS] C:1 [G] A:574 [HIS] X:2 [G] ✔
A:830 [HIS] C:2 [G] A:574 [HIS] X:3 [U] ✔
A:887 [ILE] C:1 [G] A:631 [LEU] X:2 [G] ✔
A:887 [ILE] C:2 [G] A:631 [LEU] X:3 [U] ✔
A:829 [SER] C:1 [G] A:573 [MET] X:2 [G] ✔
A:829 [SER] C:2 [G] A:573 [MET] X:3 [U] ✔
A:907 [LYS] C:3 [C] A:649 [LYS] X:4 [A] ✔
A:831 [TYR] C:1 [G] A:575 [HIS] X:2 [G] ✔
A:909 [LYS] C:3 [C] A:651 [SER] X:4 [A] ✔
A:851 [LYS] D:28 [C] A:595 [PHE] Y:20 [C] ❌ 5JB2_A_X,Y
A:853 [PHE] C:1 [G] A:599 [PHE] X:2 [G] ❌ 5JB2_A_X,Y
A:853 [PHE] D:28 [C] A:599 [PHE] Y:20 [C] ❌ 5JB2_A_X,Y
A:874 [GLY] C:1 [G] A:618 [GLY] X:2 [G] ❌ 5JB2_A_X,Y
A:829 [SER] D:28 [C] A:573 [MET] Y:20 [C] ❌ 3OG8_A_C,D
A:831 [TYR] C:2 [G] A:575 [HIS] X:3 [U] ❌ 3OG8_A_C,D
A:889 [ILE] C:1 [G] A:633 [ILE] X:2 [G] ❌ 3OG8_A_C,D
A:890 [GLU] C:1 [G] A:634 [LYS] X:2 [G] ❌ 3OG8_A_C,D
A:906 [SER] C:3 [C] A:648 [LYS] X:4 [A] ❌ 3OG8_A_C,D
A:908 [TRP] C:3 [C] A:650 [TRP] X:4 [A] ❌ 3OG8_A_C,D
A:903 [THR] D:19 [C] A:645 [LYS] Y:13 [G] ❌ 3OG8_A:903, 3OG8_D:19 no longer at interface
A:903 [THR] D:18 [G] A:645 [LYS] Y:12 [GTP] ❌ 3OG8_A:903, 3OG8_D:18 no longer at interface
A:905 [TYR] D:20 [G] A:647 [TYR] Y:14 [U] ❌ 5JB2_A:647 no longer at interface
A:811 [ARG] D:20 [G] A:555 [VAL] Y:14 [U] ❌ 5JB2_A:555 no longer at interface
A:858 [LYS] C:1 [G] A:604 [PRO] X:2 [G] ❌ 5JB2_A:604 no longer at interface
A:858 [LYS] D:28 [C] A:604 [PRO] Y:20 [C] ❌ 5JB2_A:604 no longer at interface
A:873 [TRP] C:1 [G] A:617 [TRP] X:2 [G] ❌ 5JB2_A:617 no longer at interface
A:852 [GLN] D:28 [C] A:598 [THR] Y:20 [C] ❌ 5JB2_A:598 no longer at interface
A:904 [LEU] D:20 [G] A:646 [LYS] Y:14 [U] ❌ 5JB2_A:646 no longer at interface
A:854 [SER] C:1 [G] A:600 [ARG] X:2 [G] ❌ 5JB2_A:600 no longer at interface
A:854 [SER] D:28 [C] A:600 [ARG] Y:20 [C] ❌ 5JB2_A:600 no longer at interface
A:828 [GLU] C:2 [G] A:572 [ALA] X:3 [U] ❌ 3OG8_A:828 no longer at interface
A:891 [SER] C:1 [G] A:635 [ASN] X:2 [G] ❌ 3OG8_A:891 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Mss4-like 0.75 1.43 0.20 0.86 0.32 0.64 0.5 0.51 0.37 0.09 0.57


Other pairs involving 3OG8_A_C,D or 5JB2_A_X,Y

Total number of entries: 12

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
3I62_A_B 5JB2_A_X,Y 0.80 0.61 2.0 0.1 P-loop containing nucleoside triphosphate hydrolases compare
2YKG_A_C,D 3OG8_A_C,D 0.81 0.82 0.73 0.3 Mss4-like compare
2YKG_A_C,D 5JB2_A_X,Y 0.60 0.72 2.5 0.33 P-loop containing nucleoside triphosphate hydrolases & Helical bundle in Hef helicase & Mss4-like compare
5JAJ_A_X,Y 5JB2_A_X,Y 0.97 1.0 0.28 0.9 P-loop containing nucleoside triphosphate hydrolases & Helical bundle in Hef helicase & Mss4-like compare
3OG8_A_C,D 3ZD7_A_C,D 0.81 0.8 0.61 0.3 Mss4-like compare
3OG8_A_C,D 5JB2_A_X,Y 0.51 0.75 1.43 0.2 Mss4-like compare
3I61_A_B 5JB2_A_X,Y 0.77 0.61 2.03 0.1 P-loop containing nucleoside triphosphate hydrolases compare
3ZD7_A_C,D 5JB2_A_X,Y 0.39 0.73 3.99 0.31 P-loop containing nucleoside triphosphate hydrolases & Helical bundle in Hef helicase & Mss4-like compare
5JB2_A_X,Y 5JBG_A_X 0.92 0.99 0.88 0.62 P-loop containing nucleoside triphosphate hydrolases & Helical bundle in Hef helicase & Mss4-like compare
5JB2_A_X,Y 5ZC9_A_B 0.66 0.77 2.13 0.2 P-loop containing nucleoside triphosphate hydrolases compare
3I5X_A_B 5JB2_A_X,Y 0.79 0.61 2.02 0.1 P-loop containing nucleoside triphosphate hydrolases compare
3I5Y_A_B 5JB2_A_X,Y 0.80 0.61 1.92 0.1 P-loop containing nucleoside triphosphate hydrolases compare