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All interfaces > All interologs > Interface groups > group135 > 3ZD7_A_C,D vs 5JB2_A_X,Y

Interface analysis


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Common contacts -

3ZD7_A
3ZD7_C,D
5JB2_A
5JB2_X,Y
Conserved?
A:379 [LYS] C:5 [G] A:138 [LYS] X:6 [G] ✔
A:379 [LYS] C:6 [C] A:138 [LYS] X:7 [U] ✔
A:382 [PRO] C:4 [C] A:141 [VAL] X:5 [C] ✔
A:298 [ASN] D:18 [C] A:55 [ASN] Y:19 [A] ✔
A:300 [ILE] D:18 [C] A:57 [VAL] Y:19 [A] ✔
A:300 [ILE] D:19 [G] A:57 [VAL] Y:20 [C] ✔
A:889 [ILE] C:2 [C] A:633 [ILE] X:3 [U] ✔
A:514 [VAL] D:14 [C] A:263 [VAL] Y:15 [A] ✔
A:853 [PHE] D:20 [C] A:599 [PHE] Y:21 [C] ✔
A:508 [LYS] C:9 [G] A:257 [VAL] X:9 [C] ✔
A:508 [LYS] C:10 [C] A:257 [VAL] X:10 [C] ✔
A:908 [TRP] C:1 [G] A:650 [TRP] X:2 [G] ✔
A:908 [TRP] C:2 [C] A:650 [TRP] X:3 [U] ✔
A:380 [GLN] C:4 [C] A:139 [GLU] X:5 [C] ✔
A:380 [GLN] C:5 [G] A:139 [GLU] X:6 [G] ✔
A:886 [VAL] C:1 [G] A:630 [ILE] X:2 [G] ✔
A:829 [CYS] C:1 [G] A:573 [MET] X:2 [G] ✔
A:829 [CYS] C:2 [C] A:573 [MET] X:3 [U] ✔
A:906 [SER] D:13 [G] A:648 [LYS] Y:14 [U] ✔
A:353 [ASN] D:20 [C] A:109 [ASN] Y:21 [C] ✔
A:888 [LYS] C:1 [G] A:632 [SER] X:2 [G] ✔
A:888 [LYS] C:2 [C] A:632 [SER] X:3 [U] ✔
A:515 [THR] D:13 [G] A:264 [GLU] Y:14 [U] ✔
A:890 [GLU] C:1 [G] A:634 [LYS] X:2 [G] ✔
A:327 [ALA] D:20 [C] A:85 [SER] Y:21 [C] ✔
A:299 [GLN] D:18 [C] A:56 [LYS] Y:19 [A] ✔
A:830 [HIS] C:1 [G] A:574 [HIS] X:2 [G] ✔
A:830 [HIS] C:2 [C] A:574 [HIS] X:3 [U] ✔
A:887 [ILE] C:1 [G] A:631 [LEU] X:2 [G] ✔
A:887 [ILE] C:2 [C] A:631 [LEU] X:3 [U] ✔
A:349 [GLN] D:19 [G] A:105 [GLN] Y:20 [C] ✔
A:378 [SER] C:5 [G] A:137 [GLN] X:6 [G] ✔
A:350 [ILE] D:20 [C] A:106 [ILE] Y:21 [C] ✔
A:907 [LYS] C:3 [G] A:649 [LYS] X:4 [A] ✔
A:326 [GLY] D:20 [C] A:82 [GLY] Y:21 [C] ✔
A:831 [TYR] C:1 [G] A:575 [HIS] X:2 [G] ✔
A:874 [GLY] C:1 [G] A:619 [MET] X:2 [G] ✔
A:381 [HIS] C:4 [C] A:140 [ALA] X:5 [C] ✔
A:381 [HIS] C:5 [G] A:140 [ALA] X:6 [G] ✔
A:347 [THR] D:19 [G] A:103 [THR] Y:20 [C] ✔
A:909 [LYS] C:3 [G] A:651 [SER] X:4 [A] ✔
A:379 [LYS] C:4 [C] A:138 [LYS] X:5 [C] ❌ 5JB2_A_X,Y
A:298 [ASN] D:19 [G] A:55 [ASN] Y:20 [C] ❌ 5JB2_A_X,Y
A:300 [ILE] D:20 [C] A:57 [VAL] Y:21 [C] ❌ 5JB2_A_X,Y
A:514 [VAL] D:15 [G] A:263 [VAL] Y:16 [C] ❌ 5JB2_A_X,Y
A:853 [PHE] C:1 [G] A:599 [PHE] X:2 [G] ❌ 5JB2_A_X,Y
A:511 [GLN] D:14 [C] A:260 [GLN] Y:15 [A] ❌ 5JB2_A_X,Y
A:906 [SER] C:2 [C] A:648 [LYS] X:3 [U] ❌ 5JB2_A_X,Y
A:515 [THR] D:14 [C] A:264 [GLU] Y:15 [A] ❌ 5JB2_A_X,Y
A:890 [GLU] C:2 [C] A:634 [LYS] X:3 [U] ❌ 5JB2_A_X,Y
A:299 [GLN] D:19 [G] A:56 [LYS] Y:20 [C] ❌ 5JB2_A_X,Y
A:349 [GLN] C:3 [G] A:105 [GLN] X:4 [A] ❌ 5JB2_A_X,Y
A:349 [GLN] D:20 [C] A:105 [GLN] Y:21 [C] ❌ 5JB2_A_X,Y
A:301 [PRO] D:19 [G] A:58 [HIS] Y:20 [C] ❌ 5JB2_A_X,Y
A:325 [SER] D:20 [C] A:81 [SER] Y:21 [C] ❌ 5JB2_A_X,Y
A:347 [THR] D:20 [C] A:103 [THR] Y:21 [C] ❌ 5JB2_A_X,Y
A:347 [THR] D:18 [C] A:103 [THR] Y:19 [A] ❌ 3ZD7_A_C,D
A:349 [GLN] D:18 [C] A:105 [GLN] Y:19 [A] ❌ 3ZD7_A_C,D
A:350 [ILE] D:19 [G] A:106 [ILE] Y:20 [C] ❌ 3ZD7_A_C,D
A:353 [ASN] D:19 [G] A:109 [ASN] Y:20 [C] ❌ 3ZD7_A_C,D
A:511 [GLN] D:12 [C] A:260 [GLN] Y:13 [G] ❌ 3ZD7_A_C,D
A:511 [GLN] C:10 [C] A:260 [GLN] X:10 [C] ❌ 3ZD7_A_C,D
A:511 [GLN] D:13 [G] A:260 [GLN] Y:14 [U] ❌ 3ZD7_A_C,D
A:511 [GLN] C:9 [G] A:260 [GLN] X:9 [C] ❌ 3ZD7_A_C,D
A:514 [VAL] D:13 [G] A:263 [VAL] Y:14 [U] ❌ 3ZD7_A_C,D
A:515 [THR] D:12 [C] A:264 [GLU] Y:13 [G] ❌ 3ZD7_A_C,D
A:750 [LYS] C:9 [G] A:490 [ARG] X:9 [C] ❌ 3ZD7_A_C,D
A:829 [CYS] D:19 [G] A:573 [MET] Y:20 [C] ❌ 3ZD7_A_C,D
A:829 [CYS] D:20 [C] A:573 [MET] Y:21 [C] ❌ 3ZD7_A_C,D
A:830 [HIS] D:20 [C] A:574 [HIS] Y:21 [C] ❌ 3ZD7_A_C,D
A:831 [TYR] C:2 [C] A:575 [HIS] X:3 [U] ❌ 3ZD7_A_C,D
A:301 [PRO] D:18 [C] A:58 [HIS] Y:19 [A] ❌ 3ZD7_A_C,D
A:889 [ILE] C:1 [G] A:633 [ILE] X:2 [G] ❌ 3ZD7_A_C,D
A:906 [SER] C:3 [G] A:648 [LYS] X:4 [A] ❌ 3ZD7_A_C,D
A:906 [SER] D:14 [C] A:648 [LYS] Y:15 [A] ❌ 3ZD7_A_C,D
A:907 [LYS] C:4 [C] A:649 [LYS] X:5 [C] ❌ 3ZD7_A_C,D
A:908 [TRP] C:3 [G] A:650 [TRP] X:4 [A] ❌ 3ZD7_A_C,D
A:909 [LYS] C:4 [C] A:651 [SER] X:5 [C] ❌ 3ZD7_A_C,D
A:325 [SER] D:19 [G] A:81 [SER] Y:20 [C] ❌ 3ZD7_A_C,D
A:326 [GLY] D:19 [G] A:82 [GLY] Y:20 [C] ❌ 3ZD7_A_C,D
A:511 [GLN] D:11 [G] A:260 [GLN] Y:12 [GTP] ❌ 3ZD7_D:11 no longer at interface
A:515 [THR] D:11 [G] A:264 [GLU] Y:12 [GTP] ❌ 3ZD7_D:11 no longer at interface
A:635 [LYS] D:16 [C] A:373 [LYS] Y:17 [G] ❌ 3ZD7_A:635, 3ZD7_D:16 no longer at interface
A:700 [ALA] D:17 [G] A:436 [THR] Y:18 [U] ❌ 3ZD7_A:700, 3ZD7_D:17 no longer at interface
A:700 [ALA] D:16 [C] A:436 [THR] Y:17 [G] ❌ 3ZD7_A:700, 3ZD7_D:16 no longer at interface
A:701 [ASP] D:17 [G] A:437 [SER] Y:18 [U] ❌ 3ZD7_A:701, 3ZD7_D:17 no longer at interface
A:701 [ASP] D:16 [C] A:437 [SER] Y:17 [G] ❌ 3ZD7_A:701, 3ZD7_D:16 no longer at interface
A:702 [GLU] D:17 [G] A:438 [VAL] Y:18 [U] ❌ 3ZD7_A:702, 3ZD7_D:17 no longer at interface
A:702 [GLU] D:16 [C] A:438 [VAL] Y:17 [G] ❌ 3ZD7_A:702, 3ZD7_D:16 no longer at interface
A:718 [VAL] C:7 [G] A:457 [MET] X:8 [A] ❌ 3ZD7_A:718, 3ZD7_C:7 no longer at interface
A:719 [GLY] C:7 [G] A:458 [THR] X:8 [A] ❌ 3ZD7_A:719, 3ZD7_C:7 no longer at interface
A:750 [LYS] C:7 [G] A:490 [ARG] X:8 [A] ❌ 3ZD7_C:7 no longer at interface
A:298 [ASN] D:17 [G] A:55 [ASN] Y:18 [U] ❌ 3ZD7_D:17 no longer at interface
A:299 [GLN] D:17 [G] A:56 [LYS] Y:18 [U] ❌ 3ZD7_D:17 no longer at interface
A:903 [THR] D:11 [G] A:645 [LYS] Y:12 [GTP] ❌ 3ZD7_A:903, 3ZD7_D:11 no longer at interface
A:856 [PHE] C:1 [G] A:601 [ASP] X:2 [G] ❌ 5JB2_A:601 no longer at interface
A:858 [LYS] C:1 [G] A:603 [GLU] X:2 [G] ❌ 5JB2_A:603 no longer at interface
A:910 [ASP] D:12 [C] A:652 [THR] Y:13 [G] ❌ 5JB2_A:652 no longer at interface
A:875 [ILE] C:1 [G] A:620 [GLU] X:2 [G] ❌ 5JB2_A:620 no longer at interface
A:376 [ASN] C:5 [G] A:135 [HIS] X:6 [G] ❌ 5JB2_A:135 no longer at interface
A:904 [LEU] D:13 [G] A:646 [LYS] Y:14 [U] ❌ 5JB2_A:646 no longer at interface
A:854 [SER] D:20 [C] A:600 [ARG] Y:21 [C] ❌ 5JB2_A:600 no longer at interface
A:385 [MET] C:3 [G] A:144 [LYS] X:4 [A] ❌ 3ZD7_A:385 no longer at interface
A:385 [MET] C:4 [C] A:144 [LYS] X:5 [C] ❌ 3ZD7_A:385 no longer at interface
A:507 [GLN] D:14 [C] A:256 [GLN] Y:15 [A] ❌ 3ZD7_A:507 no longer at interface
A:507 [GLN] C:9 [G] A:256 [GLN] X:9 [C] ❌ 3ZD7_A:507 no longer at interface
A:507 [GLN] D:13 [G] A:256 [GLN] Y:14 [U] ❌ 3ZD7_A:507 no longer at interface
A:510 [GLU] D:14 [C] A:259 [GLU] Y:15 [A] ❌ 3ZD7_A:510 no longer at interface
A:510 [GLU] D:13 [G] A:259 [GLU] Y:14 [U] ❌ 3ZD7_A:510 no longer at interface
A:512 [TRP] C:10 [C] A:261 [ARG] X:10 [C] ❌ 3ZD7_A:512 no longer at interface
A:518 [LYS] D:12 [C] A:267 [ASN] Y:13 [G] ❌ 3ZD7_A:518 no longer at interface
A:518 [LYS] D:13 [G] A:267 [ASN] Y:14 [U] ❌ 3ZD7_A:518 no longer at interface
A:542 [THR] D:15 [G] A:285 [ARG] Y:16 [C] ❌ 3ZD7_A:542 no longer at interface
A:542 [THR] D:14 [C] A:285 [ARG] Y:15 [A] ❌ 3ZD7_A:542 no longer at interface
A:542 [THR] D:13 [G] A:285 [ARG] Y:14 [U] ❌ 3ZD7_A:542 no longer at interface
A:635 [LYS] D:15 [G] A:373 [LYS] Y:16 [C] ❌ 3ZD7_A:635 no longer at interface
A:635 [LYS] D:14 [C] A:373 [LYS] Y:15 [A] ❌ 3ZD7_A:635 no longer at interface
A:702 [GLU] D:18 [C] A:438 [VAL] Y:19 [A] ❌ 3ZD7_A:702 no longer at interface
A:718 [VAL] C:9 [G] A:457 [MET] X:9 [C] ❌ 3ZD7_A:718 no longer at interface
A:718 [VAL] C:6 [C] A:457 [MET] X:7 [U] ❌ 3ZD7_A:718 no longer at interface
A:719 [GLY] C:6 [C] A:458 [THR] X:7 [U] ❌ 3ZD7_A:719 no longer at interface
A:746 [GLY] C:10 [C] A:486 [ARG] X:10 [C] ❌ 3ZD7_A:746 no longer at interface
A:746 [GLY] C:9 [G] A:486 [ARG] X:9 [C] ❌ 3ZD7_A:746 no longer at interface
A:827 [GLU] D:20 [C] A:571 [GLU] Y:21 [C] ❌ 3ZD7_A:827 no longer at interface
A:828 [ASP] C:2 [C] A:572 [ALA] X:3 [U] ❌ 3ZD7_A:828 no longer at interface
A:851 [LYS] D:20 [C] A:597 [ARG] Y:21 [C] ❌ 3ZD7_A:851 no longer at interface
A:857 [GLU] D:20 [C] A:602 [TRP] Y:21 [C] ❌ 3ZD7_A:857 no longer at interface
A:891 [SER] C:1 [G] A:635 [ASN] X:2 [G] ❌ 3ZD7_A:891 no longer at interface
A:903 [THR] D:12 [C] A:645 [LYS] Y:13 [G] ❌ 3ZD7_A:903 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
P-loop containing nucleoside triphosphate hydrolases & Helical bundle in Hef helicase & Mss4-like 0.73 3.99 0.31 0.72 0.33 0.8 0.94 0.39 0.33 0.05 0.56


Other pairs involving 3ZD7_A_C,D or 5JB2_A_X,Y

Total number of entries: 14

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
3I62_A_B 5JB2_A_X,Y 0.80 0.61 2.0 0.1 P-loop containing nucleoside triphosphate hydrolases compare
2YKG_A_C,D 3ZD7_A_C,D 0.82 0.91 2.9 0.73 P-loop containing nucleoside triphosphate hydrolases & Helical bundle in Hef helicase & Mss4-like compare
2YKG_A_C,D 5JB2_A_X,Y 0.60 0.72 2.5 0.33 P-loop containing nucleoside triphosphate hydrolases & Helical bundle in Hef helicase & Mss4-like compare
5JAJ_A_X,Y 5JB2_A_X,Y 0.97 1.0 0.28 0.9 P-loop containing nucleoside triphosphate hydrolases & Helical bundle in Hef helicase & Mss4-like compare
3OG8_A_C,D 3ZD7_A_C,D 0.81 0.8 0.61 0.3 Mss4-like compare
3OG8_A_C,D 5JB2_A_X,Y 0.51 0.75 1.43 0.2 Mss4-like compare
3I61_A_B 5JB2_A_X,Y 0.77 0.61 2.03 0.1 P-loop containing nucleoside triphosphate hydrolases compare
3ZD7_A_C,D 5JAJ_A_X,Y 0.39 0.71 4.22 0.31 P-loop containing nucleoside triphosphate hydrolases & Helical bundle in Hef helicase & Mss4-like compare
3ZD7_A_C,D 5JB2_A_X,Y 0.39 0.73 3.99 0.31 P-loop containing nucleoside triphosphate hydrolases & Helical bundle in Hef helicase & Mss4-like compare
3ZD7_A_C,D 5JBG_A_X 0.37 0.71 4.53 0.34 P-loop containing nucleoside triphosphate hydrolases & Helical bundle in Hef helicase & Mss4-like compare
5JB2_A_X,Y 5JBG_A_X 0.92 0.99 0.88 0.62 P-loop containing nucleoside triphosphate hydrolases & Helical bundle in Hef helicase & Mss4-like compare
5JB2_A_X,Y 5ZC9_A_B 0.66 0.77 2.13 0.2 P-loop containing nucleoside triphosphate hydrolases compare
3I5X_A_B 5JB2_A_X,Y 0.79 0.61 2.02 0.1 P-loop containing nucleoside triphosphate hydrolases compare
3I5Y_A_B 5JB2_A_X,Y 0.80 0.61 1.92 0.1 P-loop containing nucleoside triphosphate hydrolases compare