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All interfaces > All interologs > Interface groups > group135 > 5JB2_A_X,Y vs 5ZC9_A_B

Interface analysis


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Common contacts -

5JB2_A
5JB2_X,Y
5ZC9_A
5ZC9_B
Conserved?
A:82 [GLY] Y:20 [C] A:136 [GLY] B:8 [G] ✔
A:82 [GLY] Y:21 [C] A:136 [GLY] B:9 [A] ✔
A:106 [ILE] Y:20 [C] A:161 [ARG] B:8 [G] ✔
A:106 [ILE] Y:21 [C] A:161 [ARG] B:9 [A] ✔
A:373 [LYS] Y:16 [C] A:280 [ASN] B:4 [G] ✔
A:373 [LYS] Y:17 [G] A:280 [ASN] B:5 [A] ✔
A:437 [SER] Y:17 [G] A:330 [ASP] B:5 [A] ✔
A:109 [ASN] Y:20 [C] A:164 [ASP] B:8 [G] ✔
A:109 [ASN] Y:21 [C] A:164 [ASP] B:9 [A] ✔
A:103 [THR] Y:19 [A] A:158 [THR] B:7 [A] ✔
A:103 [THR] Y:20 [C] A:158 [THR] B:8 [G] ✔
A:376 [GLN] Y:17 [G] A:283 [ARG] B:5 [A] ✔
A:56 [LYS] Y:18 [U] A:109 [THR] B:6 [G] ✔
A:56 [LYS] Y:19 [A] A:109 [THR] B:7 [A] ✔
A:375 [ARG] Y:16 [C] A:282 [ARG] B:4 [G] ✔
A:375 [ARG] Y:17 [G] A:282 [ARG] B:5 [A] ✔
A:375 [ARG] Y:18 [U] A:282 [ARG] B:6 [G] ✔
A:105 [GLN] Y:19 [A] A:160 [GLY] B:7 [A] ✔
A:105 [GLN] Y:20 [C] A:160 [GLY] B:8 [G] ✔
A:436 [THR] Y:17 [G] A:329 [THR] B:5 [A] ✔
A:436 [THR] Y:18 [U] A:329 [THR] B:6 [G] ✔
A:403 [GLY] Y:18 [U] A:304 [GLY] B:6 [G] ✔
A:403 [GLY] Y:19 [A] A:304 [GLY] B:7 [A] ✔
A:81 [SER] Y:20 [C] A:135 [ILE] B:8 [G] ✔
A:402 [THR] Y:18 [U] A:303 [HIS] B:6 [G] ✔
A:418 [GLN] Y:19 [A] A:311 [ARG] B:7 [A] ✔
A:58 [HIS] Y:19 [A] A:111 [GLU] B:7 [A] ✔
A:438 [VAL] Y:17 [G] A:331 [LEU] B:5 [A] ✔
A:438 [VAL] Y:18 [U] A:331 [LEU] B:6 [G] ✔
A:438 [VAL] Y:19 [A] A:331 [LEU] B:7 [A] ✔
A:57 [VAL] Y:19 [A] A:110 [ARG] B:7 [A] ✔
A:57 [VAL] Y:20 [C] A:110 [ARG] B:8 [G] ✔
A:374 [THR] Y:16 [C] A:281 [THR] B:4 [G] ✔
A:374 [THR] Y:17 [G] A:281 [THR] B:5 [A] ✔
A:55 [ASN] Y:18 [U] A:108 [PRO] B:6 [G] ✔
A:55 [ASN] Y:19 [A] A:108 [PRO] B:7 [A] ✔
A:373 [LYS] Y:15 [A] A:280 [ASN] B:3 [A] ❌ 5ZC9_A_B
A:437 [SER] Y:18 [U] A:330 [ASP] B:6 [G] ❌ 5ZC9_A_B
A:57 [VAL] Y:21 [C] A:110 [ARG] B:9 [A] ❌ 5JB2_A_X,Y
A:57 [VAL] Y:18 [U] A:110 [ARG] B:6 [G] ❌ 5JB2_A_X,Y
A:106 [ILE] Y:19 [A] A:161 [ARG] B:7 [A] ❌ 5JB2_A_X,Y
A:139 [GLU] Y:15 [A] A:190 [ARG] B:3 [A] ❌ 5JB2_A_X,Y
A:139 [GLU] Y:17 [G] A:190 [ARG] B:5 [A] ❌ 5JB2_A_X,Y
A:139 [GLU] Y:16 [C] A:190 [ARG] B:4 [G] ❌ 5JB2_A_X,Y
A:140 [ALA] Y:17 [G] A:191 [GLY] B:5 [A] ❌ 5JB2_A_X,Y
A:140 [ALA] Y:18 [U] A:191 [GLY] B:6 [G] ❌ 5JB2_A_X,Y
A:141 [VAL] Y:19 [A] A:192 [PHE] B:7 [A] ❌ 5JB2_A_X,Y
A:141 [VAL] Y:17 [G] A:192 [PHE] B:5 [A] ❌ 5JB2_A_X,Y
A:141 [VAL] Y:18 [U] A:192 [PHE] B:6 [G] ❌ 5JB2_A_X,Y
A:144 [LYS] Y:19 [A] A:195 [GLN] B:7 [A] ❌ 5JB2_A_X,Y
A:144 [LYS] Y:18 [U] A:195 [GLN] B:6 [G] ❌ 5JB2_A_X,Y
A:418 [GLN] Y:18 [U] A:311 [ARG] B:6 [G] ❌ 5JB2_A_X,Y
A:458 [THR] Y:16 [C] A:351 [THR] B:4 [G] ❌ 5JB2_A_X,Y
A:85 [SER] Y:21 [C] A:139 [ASN] B:9 [A] ❌ 5ZC9_A:139 no longer at interface
A:83 [ASP] Y:21 [C] A:137 [GLY] B:9 [A] ❌ 5JB2_A:83 no longer at interface
A:83 [ASP] Y:20 [C] A:137 [GLY] B:8 [G] ❌ 5JB2_A:83 no longer at interface
A:84 [SER] Y:21 [C] A:138 [THR] B:9 [A] ❌ 5JB2_A:84 no longer at interface
A:86 [HIS] Y:21 [C] A:140 [VAL] B:9 [A] ❌ 5JB2_A:86 no longer at interface
A:104 [ALA] Y:20 [C] A:159 [PRO] B:8 [G] ❌ 5JB2_A:104 no longer at interface
A:104 [ALA] Y:19 [A] A:159 [PRO] B:7 [A] ❌ 5JB2_A:104 no longer at interface
A:115 [GLU] Y:21 [C] A:168 [ARG] B:9 [A] ❌ 5JB2_A:115 no longer at interface
A:115 [GLU] Y:20 [C] A:168 [ARG] B:8 [G] ❌ 5JB2_A:115 no longer at interface
A:135 [HIS] Y:17 [G] A:186 [GLU] B:5 [A] ❌ 5JB2_A:135 no longer at interface
A:412 [GLY] Y:18 [U] A:305 [ASP] B:6 [G] ❌ 5JB2_A:412 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
P-loop containing nucleoside triphosphate hydrolases 0.77 2.13 0.20 0.77 0.13 0.78 0.7 0.66 0.48 0.38 0.39


Other pairs involving 5JB2_A_X,Y or 5ZC9_A_B

Total number of entries: 13

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
3I62_A_B 5JB2_A_X,Y 0.80 0.61 2.0 0.1 P-loop containing nucleoside triphosphate hydrolases compare
2YKG_A_C,D 5JB2_A_X,Y 0.60 0.72 2.5 0.33 P-loop containing nucleoside triphosphate hydrolases & Helical bundle in Hef helicase & Mss4-like compare
5JAJ_A_X,Y 5JB2_A_X,Y 0.97 1.0 0.28 0.9 P-loop containing nucleoside triphosphate hydrolases & Helical bundle in Hef helicase & Mss4-like compare
5JAJ_A_X,Y 5ZC9_A_B 0.66 0.76 2.09 0.2 P-loop containing nucleoside triphosphate hydrolases compare
3OG8_A_C,D 5JB2_A_X,Y 0.51 0.75 1.43 0.2 Mss4-like compare
5ZC9_A_B 7DCO_x_G 0.53 0.63 4.15 0.0 P-loop containing nucleoside triphosphate hydrolases compare
3I61_A_B 5JB2_A_X,Y 0.77 0.61 2.03 0.1 P-loop containing nucleoside triphosphate hydrolases compare
3ZD7_A_C,D 5JB2_A_X,Y 0.39 0.73 3.99 0.31 P-loop containing nucleoside triphosphate hydrolases & Helical bundle in Hef helicase & Mss4-like compare
5JB2_A_X,Y 5JBG_A_X 0.92 0.99 0.88 0.62 P-loop containing nucleoside triphosphate hydrolases & Helical bundle in Hef helicase & Mss4-like compare
5JB2_A_X,Y 5ZC9_A_B 0.66 0.77 2.13 0.2 P-loop containing nucleoside triphosphate hydrolases compare
3I5X_A_B 5JB2_A_X,Y 0.79 0.61 2.02 0.1 P-loop containing nucleoside triphosphate hydrolases compare
5JBG_A_X 5ZC9_A_B 0.64 0.76 2.44 0.1 P-loop containing nucleoside triphosphate hydrolases compare
3I5Y_A_B 5JB2_A_X,Y 0.80 0.61 1.92 0.1 P-loop containing nucleoside triphosphate hydrolases compare