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All interfaces > All interologs > Interface groups > group136 > 2PXU_A_B vs 2V3C_C_M

Interface analysis


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Common contacts -

2PXU_A
2PXU_B
2V3C_C
2V3C_M
Conserved?
A:50 [ARG] B:140 [A] C:395 [ARG] M:195 [A] ✔
A:26 [VAL] B:149 [G] C:371 [LYS] M:204 [G] ✔
A:26 [VAL] B:150 [G] C:371 [LYS] M:205 [G] ✔
A:56 [ALA] B:150 [G] C:401 [ARG] M:205 [G] ✔
A:30 [ALA] B:149 [G] C:375 [VAL] M:204 [G] ✔
A:30 [ALA] B:150 [G] C:375 [VAL] M:205 [G] ✔
A:40 [ARG] B:164 [A] C:385 [ARG] M:219 [A] ✔
A:39 [GLU] B:140 [A] C:384 [GLU] M:195 [A] ✔
A:59 [GLY] B:150 [G] C:404 [GLY] M:205 [G] ✔
A:59 [GLY] B:151 [U] C:404 [GLY] M:206 [C] ✔
A:53 [ARG] B:140 [A] C:398 [ARG] M:195 [A] ✔
A:53 [ARG] B:141 [C] C:398 [ARG] M:196 [C] ✔
A:53 [ARG] B:163 [C] C:398 [ARG] M:218 [C] ✔
A:53 [ARG] B:164 [A] C:398 [ARG] M:219 [A] ✔
A:54 [ILE] B:163 [C] C:399 [ILE] M:218 [C] ✔
A:37 [MSE] B:164 [A] C:382 [LYS] M:219 [A] ✔
A:49 [SER] B:140 [A] C:394 [SER] M:195 [A] ✔
A:49 [SER] B:141 [C] C:394 [SER] M:196 [C] ✔
A:57 [GLY] B:149 [G] C:402 [GLY] M:204 [G] ✔
A:57 [GLY] B:150 [G] C:402 [GLY] M:205 [G] ✔
A:57 [GLY] B:162 [G] C:402 [GLY] M:217 [G] ✔
A:57 [GLY] B:163 [C] C:402 [GLY] M:218 [C] ✔
A:34 [SER] B:148 [A] C:379 [SER] M:203 [A] ✔
A:34 [SER] B:149 [G] C:379 [SER] M:204 [G] ✔
A:34 [SER] B:163 [C] C:379 [SER] M:218 [C] ✔
A:34 [SER] B:164 [A] C:379 [SER] M:219 [A] ✔
A:58 [SER] B:149 [G] C:403 [SER] M:204 [G] ✔
A:58 [SER] B:150 [G] C:403 [SER] M:205 [G] ✔
A:58 [SER] B:151 [U] C:403 [SER] M:206 [C] ✔
A:58 [SER] B:163 [C] C:403 [SER] M:218 [C] ✔
A:35 [MSE] B:164 [A] C:380 [MET] M:219 [A] ✔
A:38 [LYS] B:140 [A] C:383 [GLU] M:195 [A] ✔
A:33 [ASN] B:148 [A] C:378 [SER] M:203 [A] ✔
A:33 [ASN] B:149 [G] C:378 [SER] M:204 [G] ✔
A:33 [ASN] B:163 [C] C:378 [SER] M:218 [C] ✔
A:33 [ASN] B:164 [A] C:378 [SER] M:219 [A] ✔
A:29 [GLU] B:149 [G] C:374 [LYS] M:204 [G] ✔
A:31 [ILE] B:149 [G] C:376 [ILE] M:204 [G] ✔
A:60 [MSE] B:150 [G] C:405 [THR] M:205 [G] ✔
A:36 [THR] B:140 [A] C:381 [THR] M:195 [A] ✔
A:36 [THR] B:164 [A] C:381 [THR] M:219 [A] ✔
A:36 [THR] B:165 [G] C:381 [THR] M:220 [A] ✔
A:56 [ALA] B:162 [G] C:401 [ARG] M:217 [G] ❌ 2V3C_C_M
A:35 [MSE] B:163 [C] C:380 [MET] M:218 [C] ❌ 2V3C_C_M
A:60 [MSE] B:151 [U] C:405 [THR] M:206 [C] ❌ 2V3C_C_M
A:35 [MSE] B:165 [G] C:380 [MET] M:220 [A] ❌ 2PXU_A_B
A:37 [MSE] B:165 [G] C:382 [LYS] M:220 [A] ❌ 2PXU_A_B
A:40 [ARG] B:165 [G] C:385 [ARG] M:220 [A] ❌ 2PXU_A_B
A:38 [LYS] B:139 [U] C:383 [GLU] M:193 [G] ❌ 2V3C_M:193 no longer at interface
A:37 [MSE] B:166 [C] C:382 [LYS] M:221 [C] ❌ 2PXU_B:166 no longer at interface
A:52 [ARG] B:141 [C] C:397 [ARG] M:196 [C] ❌ 2V3C_C:397 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
tri-helical 0.86 0.96 0.55 0.93 0.56 0.95 0.91 0.93 0.88 0.50 0.33


Other pairs involving 2PXU_A_B or 2V3C_C_M

Total number of entries: 23

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1HQ1_A_B 2PXU_A_B 0.96 0.98 0.32 0.81 tri-helical compare
1HQ1_A_B 2V3C_C_M 0.92 0.87 0.9 0.62 tri-helical compare
2PXK_A_B 2V3C_C_M 0.95 0.85 0.99 0.6 tri-helical compare
2PXK_A_B 2PXU_A_B 0.99 0.99 0.31 1.0 tri-helical compare
2PXT_A_B 2PXU_A_B 0.99 0.99 0.19 1.0 tri-helical compare
2PXT_A_B 2V3C_C_M 0.95 0.86 0.92 0.55 tri-helical compare
2PXV_A_B 2V3C_C_M 0.93 0.85 1.01 0.52 tri-helical compare
2PXP_A_B 2V3C_C_M 0.95 0.85 1.02 0.57 tri-helical compare
2PXP_A_B 2PXU_A_B 0.99 0.99 0.26 1.0 tri-helical compare
2PXF_A_B 2PXU_A_B 0.99 0.99 0.27 1.0 tri-helical compare
2PXF_A_B 2V3C_C_M 0.95 0.86 0.97 0.57 tri-helical compare
2PXU_A_B 2PXV_A_B 0.98 0.98 0.35 0.95 tri-helical compare
2PXU_A_B 2V3C_C_M 0.93 0.86 0.96 0.55 tri-helical compare
2PXQ_A_B 2PXU_A_B 0.99 0.98 0.34 1.0 tri-helical compare
2PXQ_A_B 2V3C_C_M 0.94 0.85 1.09 0.55 tri-helical compare
2PXL_A_B 2PXU_A_B 0.99 0.97 0.22 1.0 tri-helical compare
2PXL_A_B 2V3C_C_M 0.95 0.87 0.88 0.57 tri-helical compare
2PXB_A_B 2V3C_C_M 0.95 0.87 0.86 0.55 tri-helical compare
2PXB_A_B 2PXU_A_B 0.99 0.99 0.21 1.0 tri-helical compare
2PXD_A_B 2PXU_A_B 0.99 0.99 0.25 1.0 tri-helical compare
2PXD_A_B 2V3C_C_M 0.95 0.86 0.89 0.57 tri-helical compare
2PXE_A_B 2V3C_C_M 0.95 0.88 0.7 0.6 tri-helical compare
2PXE_A_B 2PXU_A_B 0.99 0.97 0.36 1.0 tri-helical compare