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All interfaces > All interologs > Interface groups > group137 > 4Y4O_1N_1A vs 6AZ3_H_1

Interface analysis


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Common contacts -

4Y4O_1N
4Y4O_1A
6AZ3_H
6AZ3_1
Conserved?
1N:78 [TYR] 1A:1177 [G] H:81 [LEU] 1:1368 [G] ✔
1N:75 [TYR] 1A:1177 [G] H:78 [LYS] 1:1368 [G] ✔
1N:24 [GLY] 1A:1058 [U] H:35 [GLY] 1:1239 [U] ✔
1N:24 [GLY] 1A:1184 [G] H:35 [GLY] 1:1375 [G] ✔
1N:24 [GLY] 1A:1185 [C] H:35 [GLY] 1:1376 [C] ✔
1N:24 [GLY] 1A:1189 [A] H:35 [GLY] 1:1380 [A] ✔
1N:107 [LEU] 1A:1052 [C] H:106 [LEU] 1:1232 [U] ✔
1N:107 [LEU] 1A:1053 [C] H:106 [LEU] 1:1233 [C] ✔
1N:108 [PRO] 1A:1053 [C] H:107 [PRO] 1:1233 [C] ✔
1N:108 [PRO] 1A:1054 [C] H:107 [PRO] 1:1234 [A] ✔
1N:102 [ALA] 1A:1183 [G] H:101 [THR] 1:1374 [C] ✔
1N:102 [ALA] 1A:1184 [G] H:101 [THR] 1:1375 [G] ✔
1N:32 [THR] 1A:1052 [C] H:43 [LYS] 1:1232 [U] ✔
1N:112 [LEU] 1A:580 [U] H:112 [ARG] 1:663 [C] ✔
1N:112 [LEU] 1A:581 [G] H:112 [ARG] 1:664 [C] ✔
1N:22 [THR] 1A:1185 [C] H:33 [VAL] 1:1376 [C] ✔
1N:22 [THR] 1A:1186 [U] H:33 [VAL] 1:1377 [U] ✔
1N:35 [ARG] 1A:1052 [C] H:46 [LEU] 1:1232 [U] ✔
1N:35 [ARG] 1A:1053 [C] H:46 [LEU] 1:1233 [C] ✔
1N:28 [THR] 1A:1051 [C] H:39 [ALA] 1:1231 [G] ✔
1N:28 [THR] 1A:1052 [C] H:39 [ALA] 1:1232 [U] ✔
1N:28 [THR] 1A:1058 [U] H:39 [ALA] 1:1239 [U] ✔
1N:28 [THR] 1A:1189 [A] H:39 [ALA] 1:1380 [A] ✔
1N:106 [MET] 1A:1052 [C] H:105 [MET] 1:1232 [U] ✔
1N:106 [MET] 1A:1053 [C] H:105 [MET] 1:1233 [C] ✔
1N:106 [MET] 1A:1183 [G] H:105 [MET] 1:1374 [C] ✔
1N:106 [MET] 1A:1184 [G] H:105 [MET] 1:1375 [G] ✔
1N:66 [LYS] 1A:1068 [G] H:67 [ARG] 1:1253 [OMU] ✔
1N:66 [LYS] 1A:1186 [U] H:67 [ARG] 1:1377 [U] ✔
1N:23 [LEU] 1A:1184 [G] H:34 [LEU] 1:1375 [G] ✔
1N:23 [LEU] 1A:1185 [C] H:34 [LEU] 1:1376 [C] ✔
1N:31 [ALA] 1A:1052 [C] H:42 [ALA] 1:1232 [U] ✔
1N:111 [PRO] 1A:580 [U] H:111 [LYS] 1:663 [C] ✔
1N:111 [PRO] 1A:581 [G] H:111 [LYS] 1:664 [C] ✔
1N:25 [ARG] 1A:1058 [U] H:36 [ARG] 1:1239 [U] ✔
1N:25 [ARG] 1A:1185 [C] H:36 [ARG] 1:1376 [C] ✔
1N:25 [ARG] 1A:1186 [U] H:36 [ARG] 1:1377 [U] ✔
1N:25 [ARG] 1A:1188 [A] H:36 [ARG] 1:1379 [A] ✔
1N:25 [ARG] 1A:1189 [A] H:36 [ARG] 1:1380 [A] ✔
1N:105 [GLY] 1A:1052 [C] H:104 [SER] 1:1232 [U] ✔
1N:105 [GLY] 1A:1182 [G] H:104 [SER] 1:1373 [A] ✔
1N:105 [GLY] 1A:1183 [G] H:104 [SER] 1:1374 [C] ✔
1N:62 [VAL] 1A:1185 [C] H:61 [ILE] 1:1376 [C] ✔
1N:101 [HIS] 1A:1183 [G] H:100 [ARG] 1:1374 [C] ✔
1N:101 [HIS] 1A:1184 [G] H:100 [ARG] 1:1375 [G] ✔
1N:61 [ARG] 1A:1185 [C] H:60 [ASN] 1:1376 [C] ✔
1N:29 [LYS] 1A:1058 [U] H:40 [VAL] 1:1239 [U] ✔
1N:63 [THR] 1A:1186 [U] H:62 [ALA] 1:1377 [U] ✔
1N:69 [GLN] 1A:1068 [G] H:70 [ILE] 1:1253 [OMU] ✔
1N:65 [LYS] 1A:1066 [A] H:64 [THR] 1:1248 [C] ❌ 6AZ3_H_1
1N:65 [LYS] 1A:1067 [A] H:64 [THR] 1:1249 [A] ❌ 6AZ3_H_1
1N:65 [LYS] 1A:1068 [G] H:64 [THR] 1:1253 [OMU] ❌ 6AZ3_H_1
1N:65 [LYS] 1A:1186 [U] H:64 [THR] 1:1377 [U] ❌ 6AZ3_H_1
1N:35 [ARG] 1A:1054 [C] H:46 [LEU] 1:1234 [A] ❌ 6AZ3_H_1
1N:35 [ARG] 1A:1055 [A] H:46 [LEU] 1:1235 [A] ❌ 6AZ3_H_1
1N:28 [THR] 1A:1183 [G] H:39 [ALA] 1:1374 [C] ❌ 6AZ3_H_1
1N:106 [MET] 1A:1182 [G] H:105 [MET] 1:1373 [A] ❌ 6AZ3_H_1
1N:66 [LYS] 1A:1185 [C] H:67 [ARG] 1:1376 [C] ❌ 6AZ3_H_1
1N:72 [TYR] 1A:1184 [G] H:73 [LEU] 1:1375 [G] ❌ 6AZ3_H_1
1N:105 [GLY] 1A:1053 [C] H:104 [SER] 1:1233 [C] ❌ 6AZ3_H_1
1N:70 [LYS] 1A:1183 [G] H:71 [LYS] 1:1374 [C] ❌ 6AZ3_H_1
1N:70 [LYS] 1A:1184 [G] H:71 [LYS] 1:1375 [G] ❌ 6AZ3_H_1
1N:63 [THR] 1A:1068 [G] H:62 [ALA] 1:1253 [OMU] ❌ 6AZ3_H_1
1N:63 [THR] 1A:1185 [C] H:62 [ALA] 1:1376 [C] ❌ 6AZ3_H_1
1N:106 [MET] 1A:1051 [C] H:105 [MET] 1:1231 [G] ❌ 4Y4O_1N_1A
1N:111 [PRO] 1A:579 [G] H:111 [LYS] 1:662 [C] ❌ 4Y4O_1N_1A
1N:112 [LEU] 1A:582 [G] H:112 [ARG] 1:665 [C] ❌ 4Y4O_1N_1A
1N:112 [LEU] 1A:1054 [C] H:112 [ARG] 1:1234 [A] ❌ 4Y4O_1N_1A
1N:112 [LEU] 1A:1055 [A] H:112 [ARG] 1:1235 [A] ❌ 4Y4O_1N_1A
1N:112 [LEU] 1A:1053 [C] H:112 [ARG] 1:1233 [C] ❌ 4Y4O_1N_1A
1N:25 [ARG] 1A:1184 [G] H:36 [ARG] 1:1375 [G] ❌ 4Y4O_1N_1A
1N:32 [THR] 1A:1053 [C] H:43 [LYS] 1:1233 [C] ❌ 4Y4O_1N_1A
1N:32 [THR] 1A:1055 [A] H:43 [LYS] 1:1235 [A] ❌ 4Y4O_1N_1A
1N:66 [LYS] 1A:1067 [A] H:67 [ARG] 1:1249 [A] ❌ 4Y4O_1N_1A
1N:70 [LYS] 1A:1068 [G] H:71 [LYS] 1:1253 [OMU] ❌ 4Y4O_1N_1A
1N:75 [TYR] 1A:1068 [G] H:78 [LYS] 1:1253 [OMU] ❌ 4Y4O_1N_1A
1N:75 [TYR] 1A:1178 [A] H:78 [LYS] 1:1369 [G] ❌ 4Y4O_1N_1A
1N:76 [SER] 1A:1177 [G] H:79 [ARG] 1:1368 [G] ❌ 4Y4O_1N_1A
1N:83 [LYS] 1A:1178 [A] H:88 [PRO] 1:1369 [G] ❌ 4Y4O_1N_1A
1N:83 [LYS] 1A:1177 [G] H:88 [PRO] 1:1368 [G] ❌ 4Y4O_1N_1A
1N:114 [ARG] 1A:553 [A] H:114 [MET] 1:462 [A] ❌ 6AZ3_H:114, 6AZ3_1:462 no longer at interface
1N:114 [ARG] 1A:554 [A] H:114 [MET] 1:463 [C] ❌ 6AZ3_H:114, 6AZ3_1:463 no longer at interface
1N:110 [GLY] 1A:554 [A] H:109 [TYR] 1:463 [C] ❌ 6AZ3_H:109, 6AZ3_1:463 no longer at interface
1N:111 [PRO] 1A:553 [A] H:111 [LYS] 1:462 [A] ❌ 6AZ3_1:462 no longer at interface
1N:111 [PRO] 1A:554 [A] H:111 [LYS] 1:463 [C] ❌ 6AZ3_1:463 no longer at interface
1N:111 [PRO] 1A:550 [U] H:111 [LYS] 1:460 [A] ❌ 4Y4O_1A:550 no longer at interface
1N:111 [PRO] 1A:551 [A] H:111 [LYS] 1:461 [G] ❌ 4Y4O_1A:551 no longer at interface
1N:66 [LYS] 1A:1069 [U] H:67 [ARG] 1:1254 [C] ❌ 4Y4O_1A:1069 no longer at interface
1N:78 [TYR] 1A:1176 [U] H:81 [LEU] 1:1367 [U] ❌ 4Y4O_1A:1176 no longer at interface
1N:73 [THR] 1A:1177 [G] H:75 [TYR] 1:1368 [G] ❌ 6AZ3_H:75 no longer at interface
1N:73 [THR] 1A:1178 [A] H:75 [TYR] 1:1369 [G] ❌ 6AZ3_H:75 no longer at interface
1N:79 [PRO] 1A:1177 [G] H:82 [THR] 1:1368 [G] ❌ 6AZ3_H:82 no longer at interface
1N:104 [LYS] 1A:1183 [G] H:103 [ARG] 1:1374 [C] ❌ 6AZ3_H:103 no longer at interface
1N:80 [GLY] 1A:1177 [G] H:83 [ASN] 1:1368 [G] ❌ 6AZ3_H:83 no longer at interface
1N:110 [GLY] 1A:581 [G] H:109 [TYR] 1:664 [C] ❌ 6AZ3_H:109 no longer at interface
1N:115 [ARG] 1A:580 [U] H:115 [LYS] 1:663 [C] ❌ 6AZ3_H:115 no longer at interface
1N:113 [GLY] 1A:581 [G] H:113 [GLY] 1:664 [C] ❌ 6AZ3_H:113 no longer at interface
1N:82 [LEU] 1A:1177 [G] H:87 [GLY] 1:1368 [G] ❌ 6AZ3_H:87 no longer at interface
1N:82 [LEU] 1A:1178 [A] H:87 [GLY] 1:1369 [G] ❌ 6AZ3_H:87 no longer at interface
1N:109 [LYS] 1A:581 [G] H:108 [ARG] 1:664 [C] ❌ 6AZ3_H:108 no longer at interface
1N:109 [LYS] 1A:582 [G] H:108 [ARG] 1:665 [C] ❌ 6AZ3_H:108 no longer at interface
1N:109 [LYS] 1A:1053 [C] H:108 [ARG] 1:1233 [C] ❌ 6AZ3_H:108 no longer at interface
1N:64 [GLY] 1A:1186 [U] H:63 [GLY] 1:1377 [U] ❌ 6AZ3_H:63 no longer at interface
1N:74 [ARG] 1A:1177 [G] H:76 [LEU] 1:1368 [G] ❌ 6AZ3_H:76 no longer at interface
1N:103 [VAL] 1A:1183 [G] H:102 [VAL] 1:1374 [C] ❌ 6AZ3_H:102 no longer at interface
1N:81 [GLY] 1A:1177 [G] H:84 [PRO] 1:1368 [G] ❌ 6AZ3_H:84 no longer at interface
1N:98 [VAL] 1A:1184 [G] H:97 [VAL] 1:1375 [G] ❌ 6AZ3_H:97 no longer at interface
1N:77 [GLY] 1A:1177 [G] H:80 [LYS] 1:1368 [G] ❌ 4Y4O_1N:77 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L13 and L16-A 0.68 2.95 0.20 0.65 0.7 0.71 0.69 0.56 0.57 0.20 0.47


Other pairs involving 4Y4O_1N_1A or 6AZ3_H_1

Total number of entries: 16

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
4Y4O_1N_1A 6S0Z_H_A 0.72 0.97 1.13 0.53 Ribosomal protein L13 and L16-A Bacterial large subunit ribosomal RNA compare
4Y4O_1N_1A 6AZ3_H_1 0.56 0.68 2.95 0.2 Ribosomal protein L13 and L16-A compare
4Y4O_1N_1A 6YSI_F_1 0.89 0.97 0.77 0.58 Ribosomal protein L13 and L16-A Bacterial large subunit ribosomal RNA compare
4Y4O_1N_1A 7OF0_K_A 0.67 0.95 1.53 0.13 Ribosomal protein L13 and L16-A Bacterial large subunit ribosomal RNA compare
4Y4O_1N_1A 7O7Y_BO_B5 0.39 0.89 3.76 0.16 Ribosomal protein L13 and L16-A compare
4Y4O_1N_1A 7K00_i_a 0.74 0.97 0.8 0.6 Ribosomal protein L13 and L16-A Bacterial large subunit ribosomal RNA compare
4Y4O_1N_1A 7RYG_I_A 0.88 0.96 1.67 0.58 Ribosomal protein L13 and L16-A Bacterial large subunit ribosomal RNA compare
1YHQ_J_0 6AZ3_H_1 0.54 0.75 1.56 0.29 Ribosomal protein L13 and L16-A compare
1YHQ_J_0 4Y4O_1N_1A 0.51 0.92 3.01 0.2 Ribosomal protein L13 and L16-A compare
1VQ8_J_0 6AZ3_H_1 0.54 0.75 1.55 0.25 Ribosomal protein L13 and L16-A compare
1VQ8_J_0 4Y4O_1N_1A 0.52 0.92 3.01 0.2 Ribosomal protein L13 and L16-A compare
6AZ3_H_1 7O7Y_BO_B5 0.85 0.91 1.03 0.56 Ribosomal protein L13 and L16-A Eukaryotic large subunit ribosomal RNA compare
6AZ3_H_1 6S0Z_H_A 0.61 0.68 2.98 0.2 Ribosomal protein L13 and L16-A compare
6AZ3_H_1 7K00_i_a 0.59 0.67 2.72 0.17 Ribosomal protein L13 and L16-A compare
6AZ3_H_1 7RYG_I_A 0.58 0.66 3.27 0.2 Ribosomal protein L13 and L16-A compare
6AZ3_H_1 6YSI_F_1 0.61 0.66 2.81 0.2 Ribosomal protein L13 and L16-A compare