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All interfaces > All interologs > Interface groups > group137 > 4Y4O_1N_1A vs 7OF0_K_A

Interface analysis


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Common contacts -

4Y4O_1N
4Y4O_1A
7OF0_K
7OF0_A
Conserved?
1N:114 [ARG] 1A:2064 [A] K:119 [ARG] A:2705 [U] ✔
1N:73 [THR] 1A:1178 [A] K:78 [SER] A:2235 [C] ✔
1N:78 [TYR] 1A:2632 [C] K:83 [TYR] A:3107 [U] ✔
1N:78 [TYR] 1A:2654 [G] K:83 [TYR] A:3109 [U] ✔
1N:75 [TYR] 1A:1177 [G] K:80 [HIS] A:2234 [C] ✔
1N:24 [GLY] 1A:1184 [G] K:29 [GLY] A:2239 [A] ✔
1N:24 [GLY] 1A:1185 [C] K:29 [GLY] A:2240 [C] ✔
1N:79 [PRO] 1A:2526 [U] K:84 [PRO] A:3001 [G] ✔
1N:79 [PRO] 1A:2527 [C] K:84 [PRO] A:3002 [G] ✔
1N:80 [GLY] 1A:1177 [G] K:85 [GLY] A:2234 [C] ✔
1N:80 [GLY] 1A:2526 [U] K:85 [GLY] A:3001 [G] ✔
1N:80 [GLY] 1A:2527 [C] K:85 [GLY] A:3002 [G] ✔
1N:110 [GLY] 1A:554 [A] K:115 [ASN] A:1825 [A] ✔
1N:110 [GLY] 1A:581 [G] K:115 [ASN] A:1839 [C] ✔
1N:102 [ALA] 1A:1183 [G] K:107 [ALA] A:2238 [A] ✔
1N:102 [ALA] 1A:1184 [G] K:107 [ALA] A:2239 [A] ✔
1N:82 [LEU] 1A:1177 [G] K:87 [PHE] A:2234 [C] ✔
1N:82 [LEU] 1A:1178 [A] K:87 [PHE] A:2235 [C] ✔
1N:112 [LEU] 1A:580 [U] K:117 [HIS] A:1838 [C] ✔
1N:112 [LEU] 1A:581 [G] K:117 [HIS] A:1839 [C] ✔
1N:22 [THR] 1A:1185 [C] K:27 [PRO] A:2240 [C] ✔
1N:22 [THR] 1A:1186 [U] K:27 [PRO] A:2241 [A] ✔
1N:106 [MET] 1A:1182 [G] K:111 [MET] A:2237 [A] ✔
1N:106 [MET] 1A:1183 [G] K:111 [MET] A:2238 [A] ✔
1N:106 [MET] 1A:1184 [G] K:111 [MET] A:2239 [A] ✔
1N:66 [LYS] 1A:1185 [C] K:71 [LYS] A:2240 [C] ✔
1N:66 [LYS] 1A:1186 [U] K:71 [LYS] A:2241 [A] ✔
1N:23 [LEU] 1A:1184 [G] K:28 [PRO] A:2239 [A] ✔
1N:23 [LEU] 1A:1185 [C] K:28 [PRO] A:2240 [C] ✔
1N:109 [LYS] 1A:582 [G] K:114 [LYS] A:1840 [C] ✔
1N:109 [LYS] 1A:2061 [C] K:114 [LYS] A:2702 [G] ✔
1N:109 [LYS] 1A:2062 [C] K:114 [LYS] A:2703 [C] ✔
1N:111 [PRO] 1A:553 [A] K:116 [LEU] A:1824 [U] ✔
1N:111 [PRO] 1A:554 [A] K:116 [LEU] A:1825 [A] ✔
1N:111 [PRO] 1A:580 [U] K:116 [LEU] A:1838 [C] ✔
1N:111 [PRO] 1A:581 [G] K:116 [LEU] A:1839 [C] ✔
1N:72 [TYR] 1A:1184 [G] K:77 [TYR] A:2239 [A] ✔
1N:25 [ARG] 1A:1185 [C] K:30 [LYS] A:2240 [C] ✔
1N:25 [ARG] 1A:1186 [U] K:30 [LYS] A:2241 [A] ✔
1N:105 [GLY] 1A:1182 [G] K:110 [GLY] A:2237 [A] ✔
1N:105 [GLY] 1A:1183 [G] K:110 [GLY] A:2238 [A] ✔
1N:62 [VAL] 1A:1185 [C] K:67 [PHE] A:2240 [C] ✔
1N:45 [ASN] 1A:561 [A] K:50 [LEU] A:1832 [A] ✔
1N:45 [ASN] 1A:580 [U] K:50 [LEU] A:1838 [C] ✔
1N:45 [ASN] 1A:581 [G] K:50 [LEU] A:1839 [C] ✔
1N:44 [PRO] 1A:581 [G] K:49 [ALA] A:1839 [C] ✔
1N:89 [LYS] 1A:2781 [C] K:94 [GLN] A:3199 [U] ✔
1N:101 [HIS] 1A:1183 [G] K:106 [LEU] A:2238 [A] ✔
1N:101 [HIS] 1A:1184 [G] K:106 [LEU] A:2239 [A] ✔
1N:70 [LYS] 1A:1184 [G] K:75 [LYS] A:2239 [A] ✔
1N:103 [VAL] 1A:1183 [G] K:108 [ILE] A:2238 [A] ✔
1N:63 [THR] 1A:1185 [C] K:68 [SER] A:2240 [C] ✔
1N:63 [THR] 1A:1186 [U] K:68 [SER] A:2241 [A] ✔
1N:98 [VAL] 1A:1184 [G] K:103 [ILE] A:2239 [A] ✔
1N:114 [ARG] 1A:553 [A] K:119 [ARG] A:1824 [U] ❌ 7OF0_K_A
1N:114 [ARG] 1A:554 [A] K:119 [ARG] A:1825 [A] ❌ 7OF0_K_A
1N:73 [THR] 1A:1177 [G] K:78 [SER] A:2234 [C] ❌ 7OF0_K_A
1N:78 [TYR] 1A:1177 [G] K:83 [TYR] A:2234 [C] ❌ 7OF0_K_A
1N:75 [TYR] 1A:2062 [C] K:80 [HIS] A:2703 [C] ❌ 7OF0_K_A
1N:79 [PRO] 1A:1177 [G] K:84 [PRO] A:2234 [C] ❌ 7OF0_K_A
1N:104 [LYS] 1A:1183 [G] K:109 [TYR] A:2238 [A] ❌ 7OF0_K_A
1N:115 [ARG] 1A:580 [U] K:120 [THR] A:1838 [C] ❌ 7OF0_K_A
1N:113 [GLY] 1A:581 [G] K:118 [ARG] A:1839 [C] ❌ 7OF0_K_A
1N:109 [LYS] 1A:581 [G] K:114 [LYS] A:1839 [C] ❌ 7OF0_K_A
1N:70 [LYS] 1A:1183 [G] K:75 [LYS] A:2238 [A] ❌ 7OF0_K_A
1N:46 [VAL] 1A:580 [U] K:51 [SER] A:1838 [C] ❌ 7OF0_K_A
1N:104 [LYS] 1A:2062 [C] K:109 [TYR] A:2703 [C] ❌ 4Y4O_1N_1A
1N:105 [GLY] 1A:2062 [C] K:110 [GLY] A:2703 [C] ❌ 4Y4O_1N_1A
1N:108 [PRO] 1A:582 [G] K:113 [PRO] A:1840 [C] ❌ 4Y4O_1N_1A
1N:109 [LYS] 1A:1182 [G] K:114 [LYS] A:2237 [A] ❌ 4Y4O_1N_1A
1N:109 [LYS] 1A:554 [A] K:114 [LYS] A:1825 [A] ❌ 4Y4O_1N_1A
1N:109 [LYS] 1A:1183 [G] K:114 [LYS] A:2238 [A] ❌ 4Y4O_1N_1A
1N:110 [GLY] 1A:582 [G] K:115 [ASN] A:1840 [C] ❌ 4Y4O_1N_1A
1N:110 [GLY] 1A:2064 [A] K:115 [ASN] A:2705 [U] ❌ 4Y4O_1N_1A
1N:111 [PRO] 1A:2064 [A] K:116 [LEU] A:2705 [U] ❌ 4Y4O_1N_1A
1N:113 [GLY] 1A:2061 [C] K:118 [ARG] A:2702 [G] ❌ 4Y4O_1N_1A
1N:113 [GLY] 1A:2062 [C] K:118 [ARG] A:2703 [C] ❌ 4Y4O_1N_1A
1N:114 [ARG] 1A:2062 [C] K:119 [ARG] A:2703 [C] ❌ 4Y4O_1N_1A
1N:115 [ARG] 1A:553 [A] K:120 [THR] A:1824 [U] ❌ 4Y4O_1N_1A
1N:25 [ARG] 1A:1184 [G] K:30 [LYS] A:2239 [A] ❌ 4Y4O_1N_1A
1N:45 [ASN] 1A:563 [G] K:50 [LEU] A:1834 [U] ❌ 4Y4O_1N_1A
1N:66 [LYS] 1A:1184 [G] K:71 [LYS] A:2239 [A] ❌ 4Y4O_1N_1A
1N:79 [PRO] 1A:2654 [G] K:84 [PRO] A:3109 [U] ❌ 4Y4O_1N_1A
1N:75 [TYR] 1A:2046 [G] K:80 [HIS] A:2687 [C] ❌ 7OF0_A:2687 no longer at interface
1N:65 [LYS] 1A:1066 [A] K:70 [ASN] A:2158 [U] ❌ 7OF0_K:70, 7OF0_A:2158 no longer at interface
1N:65 [LYS] 1A:1067 [A] K:70 [ASN] A:2159 [U] ❌ 7OF0_K:70, 7OF0_A:2159 no longer at interface
1N:25 [ARG] 1A:1188 [A] K:30 [LYS] A:2243 [A] ❌ 7OF0_A:2243 no longer at interface
1N:45 [ASN] 1A:562 [C] K:50 [LEU] A:1833 [C] ❌ 7OF0_A:1833 no longer at interface
1N:45 [ASN] 1A:579 [G] K:50 [LEU] A:1837 [C] ❌ 7OF0_A:1837 no longer at interface
1N:104 [LYS] 1A:2063 [U] K:109 [TYR] A:2704 [A] ❌ 4Y4O_1A:2063 no longer at interface
1N:113 [GLY] 1A:2063 [U] K:118 [ARG] A:2704 [A] ❌ 4Y4O_1A:2063 no longer at interface
1N:114 [ARG] 1A:2065 [C] K:119 [ARG] A:2706 [A] ❌ 4Y4O_1A:2065 no longer at interface
1N:114 [ARG] 1A:2063 [U] K:119 [ARG] A:2704 [A] ❌ 4Y4O_1A:2063 no longer at interface
1N:25 [ARG] 1A:1187 [U] K:30 [LYS] A:2242 [U] ❌ 4Y4O_1A:1187 no longer at interface
1N:45 [ASN] 1A:564 [G] K:50 [LEU] A:1835 [A] ❌ 4Y4O_1A:564 no longer at interface
1N:46 [VAL] 1A:564 [G] K:51 [SER] A:1835 [A] ❌ 4Y4O_1A:564 no longer at interface
1N:75 [TYR] 1A:1176 [U] K:80 [HIS] A:2233 [U] ❌ 4Y4O_1A:1176 no longer at interface
1N:89 [LYS] 1A:2780 [C] K:94 [GLN] A:3198 [A] ❌ 4Y4O_1A:2780 no longer at interface
1N:76 [SER] 1A:2654 [G] K:81 [THR] A:3109 [U] ❌ 7OF0_K:81 no longer at interface
1N:65 [LYS] 1A:1186 [U] K:70 [ASN] A:2241 [A] ❌ 7OF0_K:70 no longer at interface
1N:28 [THR] 1A:1183 [G] K:33 [ALA] A:2238 [A] ❌ 7OF0_K:33 no longer at interface
1N:64 [GLY] 1A:1186 [U] K:69 [GLY] A:2241 [A] ❌ 7OF0_K:69 no longer at interface
1N:74 [ARG] 1A:1177 [G] K:79 [SER] A:2234 [C] ❌ 7OF0_K:79 no longer at interface
1N:83 [LYS] 1A:2654 [G] K:88 [ARG] A:3109 [U] ❌ 7OF0_K:88 no longer at interface
1N:83 [LYS] 1A:2781 [C] K:88 [ARG] A:3199 [U] ❌ 7OF0_K:88 no longer at interface
1N:83 [LYS] 1A:2782 [C] K:88 [ARG] A:3200 [U] ❌ 7OF0_K:88 no longer at interface
1N:61 [ARG] 1A:1185 [C] K:66 [ALA] A:2240 [C] ❌ 7OF0_K:66 no longer at interface
1N:81 [GLY] 1A:1177 [G] K:86 [GLY] A:2234 [C] ❌ 7OF0_K:86 no longer at interface
1N:81 [GLY] 1A:2654 [G] K:86 [GLY] A:3109 [U] ❌ 7OF0_K:86 no longer at interface
1N:71 [ILE] 1A:1178 [A] K:76 [VAL] A:2235 [C] ❌ 4Y4O_1N:71 no longer at interface
1N:77 [GLY] 1A:1177 [G] K:82 [GLY] A:2234 [C] ❌ 4Y4O_1N:77 no longer at interface
1N:84 [LYS] 1A:1178 [A] K:89 [GLN] A:2235 [C] ❌ 4Y4O_1N:84 no longer at interface
1N:92 [ALA] 1A:2781 [C] K:97 [LEU] A:3199 [U] ❌ 4Y4O_1N:92 no longer at interface
1N:93 [THR] 1A:2782 [C] K:98 [ARG] A:3200 [U] ❌ 4Y4O_1N:93 no longer at interface
1N:93 [THR] 1A:2781 [C] K:98 [ARG] A:3199 [U] ❌ 4Y4O_1N:93 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L13 and L16-A Bacterial large subunit ribosomal RNA 0.95 1.53 0.13 0.89 0.97 0.77 0.74 0.67 0.66 0.17 0.52


Other pairs involving 4Y4O_1N_1A or 7OF0_K_A

Total number of entries: 15

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
4Y4O_1N_1A 6S0Z_H_A 0.72 0.97 1.13 0.53 Ribosomal protein L13 and L16-A Bacterial large subunit ribosomal RNA compare
4Y4O_1N_1A 6AZ3_H_1 0.56 0.68 2.95 0.2 Ribosomal protein L13 and L16-A compare
4Y4O_1N_1A 6YSI_F_1 0.89 0.97 0.77 0.58 Ribosomal protein L13 and L16-A Bacterial large subunit ribosomal RNA compare
4Y4O_1N_1A 7OF0_K_A 0.67 0.95 1.53 0.13 Ribosomal protein L13 and L16-A Bacterial large subunit ribosomal RNA compare
4Y4O_1N_1A 7O7Y_BO_B5 0.39 0.89 3.76 0.16 Ribosomal protein L13 and L16-A compare
4Y4O_1N_1A 7K00_i_a 0.74 0.97 0.8 0.6 Ribosomal protein L13 and L16-A Bacterial large subunit ribosomal RNA compare
4Y4O_1N_1A 7RYG_I_A 0.88 0.96 1.67 0.58 Ribosomal protein L13 and L16-A Bacterial large subunit ribosomal RNA compare
1YHQ_J_0 7OF0_K_A 0.41 0.91 3.37 0.16 Ribosomal protein L13 and L16-A compare
1YHQ_J_0 4Y4O_1N_1A 0.51 0.92 3.01 0.2 Ribosomal protein L13 and L16-A compare
6S0Z_H_A 7OF0_K_A 0.62 0.94 2.27 0.1 Ribosomal protein L13 and L16-A Bacterial large subunit ribosomal RNA compare
7OF0_K_A 7RYG_I_A 0.65 0.91 2.27 0.1 Ribosomal protein L13 and L16-A Bacterial large subunit ribosomal RNA compare
6YSI_F_1 7OF0_K_A 0.66 0.91 1.63 0.13 Ribosomal protein L13 and L16-A Bacterial large subunit ribosomal RNA compare
1VQ8_J_0 7OF0_K_A 0.41 0.91 3.33 0.1 Ribosomal protein L13 and L16-A compare
1VQ8_J_0 4Y4O_1N_1A 0.52 0.92 3.01 0.2 Ribosomal protein L13 and L16-A compare
7K00_i_a 7OF0_K_A 0.64 0.92 1.53 0.19 Ribosomal protein L13 and L16-A Bacterial large subunit ribosomal RNA compare