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All interfaces > All interologs > Interface groups > group137 > 6AZ3_H_1 vs 6S0Z_H_A

Interface analysis


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Common contacts -

6AZ3_H
6AZ3_1
6S0Z_H
6S0Z_A
Conserved?
H:111 [LYS] 1:662 [C] H:114 [ARG] A:599 [A] ✔
H:111 [LYS] 1:663 [C] H:114 [ARG] A:600 [U] ✔
H:111 [LYS] 1:664 [C] H:114 [ARG] A:601 [G] ✔
H:67 [ARG] 1:1253 [OMU] H:72 [ASP] A:1066 [G] ✔
H:34 [LEU] 1:1375 [G] H:26 [LEU] A:1183 [G] ✔
H:34 [LEU] 1:1376 [C] H:26 [LEU] A:1184 [C] ✔
H:141 [ARG] 1:1239 [U] H:145 [GLY] A:1056 [U] ✔
H:104 [SER] 1:1232 [U] H:108 [GLY] A:1050 [C] ✔
H:104 [SER] 1:1373 [A] H:108 [GLY] A:1181 [G] ✔
H:104 [SER] 1:1374 [C] H:108 [GLY] A:1182 [G] ✔
H:39 [ALA] 1:1231 [G] H:31 [SER] A:1049 [C] ✔
H:39 [ALA] 1:1232 [U] H:31 [SER] A:1050 [C] ✔
H:39 [ALA] 1:1239 [U] H:31 [SER] A:1056 [U] ✔
H:39 [ALA] 1:1380 [A] H:31 [SER] A:1187 [A] ✔
H:35 [GLY] 1:1239 [U] H:27 [GLY] A:1056 [U] ✔
H:35 [GLY] 1:1375 [G] H:27 [GLY] A:1183 [G] ✔
H:35 [GLY] 1:1376 [C] H:27 [GLY] A:1184 [C] ✔
H:35 [GLY] 1:1380 [A] H:27 [GLY] A:1187 [A] ✔
H:101 [THR] 1:1374 [C] H:105 [SER] A:1182 [G] ✔
H:101 [THR] 1:1375 [G] H:105 [SER] A:1183 [G] ✔
H:33 [VAL] 1:1376 [C] H:25 [THR] A:1184 [C] ✔
H:33 [VAL] 1:1377 [U] H:25 [THR] A:1185 [U] ✔
H:43 [LYS] 1:1232 [U] H:35 [SER] A:1050 [C] ✔
H:40 [VAL] 1:1239 [U] H:32 [GLU] A:1056 [U] ✔
H:110 [THR] 1:664 [C] H:113 [THR] A:601 [G] ✔
H:110 [THR] 1:665 [C] H:113 [THR] A:602 [G] ✔
H:100 [ARG] 1:1374 [C] H:104 [ASN] A:1182 [G] ✔
H:106 [LEU] 1:1232 [U] H:110 [LEU] A:1050 [C] ✔
H:106 [LEU] 1:1233 [C] H:110 [LEU] A:1051 [C] ✔
H:46 [LEU] 1:1232 [U] H:38 [ARG] A:1050 [C] ✔
H:46 [LEU] 1:1233 [C] H:38 [ARG] A:1051 [C] ✔
H:78 [LYS] 1:1368 [G] H:78 [HIS] A:1175 [G] ✔
H:42 [ALA] 1:1232 [U] H:34 [ALA] A:1050 [C] ✔
H:80 [LYS] 1:1368 [G] H:80 [ASN] A:1175 [G] ✔
H:36 [ARG] 1:1239 [U] H:28 [ARG] A:1056 [U] ✔
H:36 [ARG] 1:1376 [C] H:28 [ARG] A:1184 [C] ✔
H:36 [ARG] 1:1377 [U] H:28 [ARG] A:1185 [U] ✔
H:36 [ARG] 1:1379 [A] H:28 [ARG] A:1186 [A] ✔
H:36 [ARG] 1:1380 [A] H:28 [ARG] A:1187 [A] ✔
H:107 [PRO] 1:1233 [C] H:111 [PRO] A:1051 [C] ✔
H:107 [PRO] 1:1234 [A] H:111 [PRO] A:1052 [A] ✔
H:112 [ARG] 1:663 [C] H:115 [LEU] A:600 [U] ✔
H:112 [ARG] 1:664 [C] H:115 [LEU] A:601 [G] ✔
H:105 [MET] 1:1232 [U] H:109 [MET] A:1050 [C] ✔
H:105 [MET] 1:1233 [C] H:109 [MET] A:1051 [C] ✔
H:105 [MET] 1:1374 [C] H:109 [MET] A:1182 [G] ✔
H:105 [MET] 1:1375 [G] H:109 [MET] A:1183 [G] ✔
H:81 [LEU] 1:1368 [G] H:81 [HIS] A:1175 [G] ✔
H:62 [ALA] 1:1377 [U] H:66 [THR] A:1185 [U] ✔
H:67 [ARG] 1:1377 [U] H:72 [ASP] A:1185 [U] ❌ 6S0Z_H_A
H:79 [ARG] 1:1368 [G] H:79 [SER] A:1175 [G] ❌ 6S0Z_H_A
H:43 [LYS] 1:1233 [C] H:35 [SER] A:1051 [C] ❌ 6S0Z_H_A
H:43 [LYS] 1:1235 [A] H:35 [SER] A:1053 [A] ❌ 6S0Z_H_A
H:100 [ARG] 1:1375 [G] H:104 [ASN] A:1183 [G] ❌ 6S0Z_H_A
H:88 [PRO] 1:1368 [G] H:86 [LYS] A:1175 [G] ❌ 6S0Z_H_A
H:88 [PRO] 1:1369 [G] H:86 [LYS] A:1177 [A] ❌ 6S0Z_H_A
H:78 [LYS] 1:1253 [OMU] H:78 [HIS] A:1066 [G] ❌ 6S0Z_H_A
H:78 [LYS] 1:1369 [G] H:78 [HIS] A:1177 [A] ❌ 6S0Z_H_A
H:36 [ARG] 1:1375 [G] H:28 [ARG] A:1183 [G] ❌ 6S0Z_H_A
H:112 [ARG] 1:665 [C] H:115 [LEU] A:602 [G] ❌ 6S0Z_H_A
H:112 [ARG] 1:1233 [C] H:115 [LEU] A:1051 [C] ❌ 6S0Z_H_A
H:112 [ARG] 1:1234 [A] H:115 [LEU] A:1052 [A] ❌ 6S0Z_H_A
H:112 [ARG] 1:1235 [A] H:115 [LEU] A:1053 [A] ❌ 6S0Z_H_A
H:105 [MET] 1:1231 [G] H:109 [MET] A:1049 [C] ❌ 6S0Z_H_A
H:105 [MET] 1:1373 [A] H:109 [MET] A:1181 [G] ❌ 6AZ3_H_1
H:39 [ALA] 1:1374 [C] H:31 [SER] A:1182 [G] ❌ 6AZ3_H_1
H:46 [LEU] 1:1234 [A] H:38 [ARG] A:1052 [A] ❌ 6AZ3_H_1
H:46 [LEU] 1:1235 [A] H:38 [ARG] A:1053 [A] ❌ 6AZ3_H_1
H:62 [ALA] 1:1376 [C] H:66 [THR] A:1184 [C] ❌ 6AZ3_H_1
H:62 [ALA] 1:1253 [OMU] H:66 [THR] A:1066 [G] ❌ 6AZ3_H_1
H:111 [LYS] 1:460 [A] H:114 [ARG] A:570 [U] ❌ 6S0Z_A:570 no longer at interface
H:111 [LYS] 1:461 [G] H:114 [ARG] A:571 [A] ❌ 6S0Z_A:571 no longer at interface
H:67 [ARG] 1:1249 [A] H:72 [ASP] A:1065 [A] ❌ 6S0Z_A:1065 no longer at interface
H:67 [ARG] 1:1254 [C] H:72 [ASP] A:1067 [U] ❌ 6S0Z_A:1067 no longer at interface
H:81 [LEU] 1:1367 [U] H:81 [HIS] A:1174 [U] ❌ 6S0Z_A:1174 no longer at interface
H:111 [LYS] 1:463 [C] H:114 [ARG] A:574 [A] ❌ 6AZ3_1:463 no longer at interface
H:111 [LYS] 1:462 [A] H:114 [ARG] A:573 [A] ❌ 6AZ3_1:462 no longer at interface
H:114 [MET] 1:462 [A] H:117 [GLU] A:573 [A] ❌ 6AZ3_H:114, 6AZ3_1:462 no longer at interface
H:141 [ARG] 1:1240 [U] H:145 [GLY] A:1057 [A] ❌ 6AZ3_1:1240 no longer at interface
H:61 [ILE] 1:1376 [C] H:65 [PHE] A:1184 [C] ❌ 6S0Z_H:65 no longer at interface
H:71 [LYS] 1:1253 [OMU] H:74 [VAL] A:1066 [G] ❌ 6S0Z_H:74 no longer at interface
H:60 [ASN] 1:1376 [C] H:64 [GLU] A:1184 [C] ❌ 6S0Z_H:64 no longer at interface
H:97 [VAL] 1:1375 [G] H:101 [LEU] A:1183 [G] ❌ 6AZ3_H:97 no longer at interface
H:102 [VAL] 1:1374 [C] H:106 [ILE] A:1182 [G] ❌ 6AZ3_H:102 no longer at interface
H:140 [PRO] 1:1239 [U] H:144 [ARG] A:1056 [U] ❌ 6AZ3_H:140 no longer at interface
H:63 [GLY] 1:1377 [U] H:67 [GLY] A:1185 [U] ❌ 6AZ3_H:63 no longer at interface
H:68 [ASN] 1:1376 [C] H:73 [LYS] A:1184 [C] ❌ 6AZ3_H:68 no longer at interface
H:68 [ASN] 1:1375 [G] H:73 [LYS] A:1183 [G] ❌ 6AZ3_H:68 no longer at interface
H:72 [TYR] 1:1375 [G] H:75 [TYR] A:1183 [G] ❌ 6AZ3_H:72 no longer at interface
H:75 [TYR] 1:1369 [G] H:76 [TYR] A:1177 [A] ❌ 6AZ3_H:75 no longer at interface
H:82 [THR] 1:1368 [G] H:82 [PRO] A:1175 [G] ❌ 6AZ3_H:82 no longer at interface
H:83 [ASN] 1:1368 [G] H:83 [GLY] A:1175 [G] ❌ 6AZ3_H:83 no longer at interface
H:84 [PRO] 1:1368 [G] H:84 [GLY] A:1175 [G] ❌ 6AZ3_H:84 no longer at interface
H:87 [GLY] 1:1368 [G] H:85 [ILE] A:1175 [G] ❌ 6AZ3_H:87 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L13 and L16-A 0.68 2.98 0.20 0.64 0.71 0.63 0.62 0.61 0.63 0.29 0.53


Other pairs involving 6AZ3_H_1 or 6S0Z_H_A

Total number of entries: 16

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
4Y4O_1N_1A 6S0Z_H_A 0.72 0.97 1.13 0.53 Ribosomal protein L13 and L16-A Bacterial large subunit ribosomal RNA compare
4Y4O_1N_1A 6AZ3_H_1 0.56 0.68 2.95 0.2 Ribosomal protein L13 and L16-A compare
1YHQ_J_0 6AZ3_H_1 0.54 0.75 1.56 0.29 Ribosomal protein L13 and L16-A compare
1YHQ_J_0 6S0Z_H_A 0.39 0.92 3.38 0.22 Ribosomal protein L13 and L16-A compare
6S0Z_H_A 7K00_i_a 0.87 0.97 1.27 0.58 Ribosomal protein L13 and L16-A Bacterial large subunit ribosomal RNA compare
6S0Z_H_A 7O7Y_BO_B5 0.37 0.88 4.74 0.17 Ribosomal protein L13 and L16-A compare
6S0Z_H_A 7RYG_I_A 0.89 0.98 1.12 0.56 Ribosomal protein L13 and L16-A Bacterial large subunit ribosomal RNA compare
6S0Z_H_A 6YSI_F_1 0.89 0.98 1.14 0.59 Ribosomal protein L13 and L16-A Bacterial large subunit ribosomal RNA compare
6S0Z_H_A 7OF0_K_A 0.62 0.94 2.27 0.1 Ribosomal protein L13 and L16-A Bacterial large subunit ribosomal RNA compare
1VQ8_J_0 6AZ3_H_1 0.54 0.75 1.55 0.25 Ribosomal protein L13 and L16-A compare
1VQ8_J_0 6S0Z_H_A 0.39 0.92 3.37 0.22 Ribosomal protein L13 and L16-A compare
6AZ3_H_1 7O7Y_BO_B5 0.85 0.91 1.03 0.56 Ribosomal protein L13 and L16-A Eukaryotic large subunit ribosomal RNA compare
6AZ3_H_1 6S0Z_H_A 0.61 0.68 2.98 0.2 Ribosomal protein L13 and L16-A compare
6AZ3_H_1 7K00_i_a 0.59 0.67 2.72 0.17 Ribosomal protein L13 and L16-A compare
6AZ3_H_1 7RYG_I_A 0.58 0.66 3.27 0.2 Ribosomal protein L13 and L16-A compare
6AZ3_H_1 6YSI_F_1 0.61 0.66 2.81 0.2 Ribosomal protein L13 and L16-A compare