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All interfaces > All interologs > Interface groups > group137 > 6AZ3_H_1 vs 6YSI_F_1

Interface analysis


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Common contacts -

6AZ3_H
6AZ3_1
6YSI_F
6YSI_1
Conserved?
H:111 [LYS] 1:663 [C] F:113 [PRO] 1:548 [C] ✔
H:111 [LYS] 1:664 [C] F:113 [PRO] 1:549 [U] ✔
H:61 [ILE] 1:1376 [C] F:64 [VAL] 1:1130 [C] ✔
H:67 [ARG] 1:1253 [OMU] F:71 [ASP] 1:1012 [G] ✔
H:34 [LEU] 1:1375 [G] F:25 [LEU] 1:1129 [G] ✔
H:34 [LEU] 1:1376 [C] F:25 [LEU] 1:1130 [C] ✔
H:104 [SER] 1:1232 [U] F:107 [GLY] 1:996 [C] ✔
H:104 [SER] 1:1373 [A] F:107 [GLY] 1:1127 [G] ✔
H:104 [SER] 1:1374 [C] F:107 [GLY] 1:1128 [G] ✔
H:39 [ALA] 1:1231 [G] F:30 [THR] 1:995 [C] ✔
H:39 [ALA] 1:1232 [U] F:30 [THR] 1:996 [C] ✔
H:39 [ALA] 1:1239 [U] F:30 [THR] 1:1002 [U] ✔
H:39 [ALA] 1:1380 [A] F:30 [THR] 1:1134 [A] ✔
H:35 [GLY] 1:1239 [U] F:26 [GLY] 1:1002 [U] ✔
H:35 [GLY] 1:1375 [G] F:26 [GLY] 1:1129 [G] ✔
H:35 [GLY] 1:1376 [C] F:26 [GLY] 1:1130 [C] ✔
H:35 [GLY] 1:1380 [A] F:26 [GLY] 1:1134 [A] ✔
H:101 [THR] 1:1374 [C] F:104 [ALA] 1:1128 [G] ✔
H:101 [THR] 1:1375 [G] F:104 [ALA] 1:1129 [G] ✔
H:33 [VAL] 1:1376 [C] F:24 [THR] 1:1130 [C] ✔
H:33 [VAL] 1:1377 [U] F:24 [THR] 1:1131 [U] ✔
H:43 [LYS] 1:1232 [U] F:34 [ARG] 1:996 [C] ✔
H:100 [ARG] 1:1374 [C] F:103 [ARG] 1:1128 [G] ✔
H:100 [ARG] 1:1375 [G] F:103 [ARG] 1:1129 [G] ✔
H:106 [LEU] 1:1232 [U] F:109 [LEU] 1:996 [C] ✔
H:106 [LEU] 1:1233 [C] F:109 [LEU] 1:997 [C] ✔
H:46 [LEU] 1:1232 [U] F:37 [ARG] 1:996 [C] ✔
H:46 [LEU] 1:1233 [C] F:37 [ARG] 1:997 [C] ✔
H:78 [LYS] 1:1368 [G] F:77 [HIS] 1:1121 [G] ✔
H:42 [ALA] 1:1232 [U] F:33 [ALA] 1:996 [C] ✔
H:80 [LYS] 1:1368 [G] F:79 [GLU] 1:1121 [G] ✔
H:36 [ARG] 1:1239 [U] F:27 [ARG] 1:1002 [U] ✔
H:36 [ARG] 1:1375 [G] F:27 [ARG] 1:1129 [G] ✔
H:36 [ARG] 1:1376 [C] F:27 [ARG] 1:1130 [C] ✔
H:36 [ARG] 1:1377 [U] F:27 [ARG] 1:1131 [U] ✔
H:36 [ARG] 1:1379 [A] F:27 [ARG] 1:1133 [A] ✔
H:36 [ARG] 1:1380 [A] F:27 [ARG] 1:1134 [A] ✔
H:107 [PRO] 1:1233 [C] F:110 [PRO] 1:997 [C] ✔
H:107 [PRO] 1:1234 [A] F:110 [PRO] 1:998 [A] ✔
H:112 [ARG] 1:663 [C] F:114 [LEU] 1:548 [C] ✔
H:112 [ARG] 1:664 [C] F:114 [LEU] 1:549 [U] ✔
H:105 [MET] 1:1232 [U] F:108 [MET] 1:996 [C] ✔
H:105 [MET] 1:1233 [C] F:108 [MET] 1:997 [C] ✔
H:105 [MET] 1:1374 [C] F:108 [MET] 1:1128 [G] ✔
H:105 [MET] 1:1375 [G] F:108 [MET] 1:1129 [G] ✔
H:81 [LEU] 1:1368 [G] F:80 [PHE] 1:1121 [G] ✔
H:62 [ALA] 1:1377 [U] F:65 [THR] 1:1131 [U] ✔
H:60 [ASN] 1:1376 [C] F:63 [GLN] 1:1130 [C] ✔
H:111 [LYS] 1:662 [C] F:113 [PRO] 1:547 [A] ❌ 6YSI_F_1
H:67 [ARG] 1:1377 [U] F:71 [ASP] 1:1131 [U] ❌ 6YSI_F_1
H:79 [ARG] 1:1368 [G] F:78 [THR] 1:1121 [G] ❌ 6YSI_F_1
H:43 [LYS] 1:1233 [C] F:34 [ARG] 1:997 [C] ❌ 6YSI_F_1
H:43 [LYS] 1:1235 [A] F:34 [ARG] 1:999 [A] ❌ 6YSI_F_1
H:88 [PRO] 1:1368 [G] F:85 [LYS] 1:1121 [G] ❌ 6YSI_F_1
H:88 [PRO] 1:1369 [G] F:85 [LYS] 1:1123 [A] ❌ 6YSI_F_1
H:78 [LYS] 1:1253 [OMU] F:77 [HIS] 1:1012 [G] ❌ 6YSI_F_1
H:78 [LYS] 1:1369 [G] F:77 [HIS] 1:1123 [A] ❌ 6YSI_F_1
H:112 [ARG] 1:1233 [C] F:114 [LEU] 1:997 [C] ❌ 6YSI_F_1
H:112 [ARG] 1:1234 [A] F:114 [LEU] 1:998 [A] ❌ 6YSI_F_1
H:112 [ARG] 1:1235 [A] F:114 [LEU] 1:999 [A] ❌ 6YSI_F_1
H:105 [MET] 1:1231 [G] F:108 [MET] 1:995 [C] ❌ 6YSI_F_1
H:81 [LEU] 1:1367 [U] F:80 [PHE] 1:1120 [U] ❌ 6YSI_F_1
H:104 [SER] 1:1233 [C] F:107 [GLY] 1:997 [C] ❌ 6AZ3_H_1
H:105 [MET] 1:1373 [A] F:108 [MET] 1:1127 [G] ❌ 6AZ3_H_1
H:39 [ALA] 1:1374 [C] F:30 [THR] 1:1128 [G] ❌ 6AZ3_H_1
H:46 [LEU] 1:1235 [A] F:37 [ARG] 1:999 [A] ❌ 6AZ3_H_1
H:46 [LEU] 1:1234 [A] F:37 [ARG] 1:998 [A] ❌ 6AZ3_H_1
H:62 [ALA] 1:1253 [OMU] F:65 [THR] 1:1012 [G] ❌ 6AZ3_H_1
H:62 [ALA] 1:1376 [C] F:65 [THR] 1:1130 [C] ❌ 6AZ3_H_1
H:64 [THR] 1:1377 [U] F:67 [ASN] 1:1131 [U] ❌ 6AZ3_H_1
H:111 [LYS] 1:460 [A] F:113 [PRO] 1:517 [U] ❌ 6YSI_1:517 no longer at interface
H:111 [LYS] 1:461 [G] F:113 [PRO] 1:518 [A] ❌ 6YSI_1:518 no longer at interface
H:67 [ARG] 1:1249 [A] F:71 [ASP] 1:1011 [A] ❌ 6YSI_1:1011 no longer at interface
H:67 [ARG] 1:1254 [C] F:71 [ASP] 1:1013 [U] ❌ 6YSI_1:1013 no longer at interface
H:112 [ARG] 1:665 [C] F:114 [LEU] 1:550 [G] ❌ 6YSI_1:550 no longer at interface
H:109 [TYR] 1:463 [C] F:112 [GLY] 1:521 [A] ❌ 6AZ3_H:109, 6AZ3_1:463 no longer at interface
H:111 [LYS] 1:463 [C] F:113 [PRO] 1:521 [A] ❌ 6AZ3_1:463 no longer at interface
H:111 [LYS] 1:462 [A] F:113 [PRO] 1:520 [A] ❌ 6AZ3_1:462 no longer at interface
H:114 [MET] 1:463 [C] F:116 [TYR] 1:521 [A] ❌ 6AZ3_H:114, 6AZ3_1:463 no longer at interface
H:114 [MET] 1:462 [A] F:116 [TYR] 1:520 [A] ❌ 6AZ3_H:114, 6AZ3_1:462 no longer at interface
H:40 [VAL] 1:1239 [U] F:31 [GLU] 1:1002 [U] ❌ 6YSI_F:31 no longer at interface
H:71 [LYS] 1:1253 [OMU] F:73 [LYS] 1:1012 [G] ❌ 6YSI_F:73 no longer at interface
H:97 [VAL] 1:1375 [G] F:100 [ILE] 1:1129 [G] ❌ 6AZ3_H:97 no longer at interface
H:102 [VAL] 1:1374 [C] F:105 [VAL] 1:1128 [G] ❌ 6AZ3_H:102 no longer at interface
H:108 [ARG] 1:1233 [C] F:111 [LYS] 1:997 [C] ❌ 6AZ3_H:108 no longer at interface
H:109 [TYR] 1:664 [C] F:112 [GLY] 1:549 [U] ❌ 6AZ3_H:109 no longer at interface
H:113 [GLY] 1:664 [C] F:115 [GLY] 1:549 [U] ❌ 6AZ3_H:113 no longer at interface
H:63 [GLY] 1:1377 [U] F:66 [GLY] 1:1131 [U] ❌ 6AZ3_H:63 no longer at interface
H:63 [GLY] 1:1248 [C] F:66 [GLY] 1:1010 [A] ❌ 6AZ3_H:63 no longer at interface
H:68 [ASN] 1:1375 [G] F:72 [LYS] 1:1129 [G] ❌ 6AZ3_H:68 no longer at interface
H:68 [ASN] 1:1376 [C] F:72 [LYS] 1:1130 [C] ❌ 6AZ3_H:68 no longer at interface
H:72 [TYR] 1:1375 [G] F:74 [TYR] 1:1129 [G] ❌ 6AZ3_H:72 no longer at interface
H:75 [TYR] 1:1369 [G] F:75 [TYR] 1:1123 [A] ❌ 6AZ3_H:75 no longer at interface
H:82 [THR] 1:1368 [G] F:81 [PRO] 1:1121 [G] ❌ 6AZ3_H:82 no longer at interface
H:82 [THR] 1:1367 [U] F:81 [PRO] 1:1120 [U] ❌ 6AZ3_H:82 no longer at interface
H:83 [ASN] 1:1368 [G] F:82 [GLY] 1:1121 [G] ❌ 6AZ3_H:83 no longer at interface
H:84 [PRO] 1:1368 [G] F:83 [GLY] 1:1121 [G] ❌ 6AZ3_H:84 no longer at interface
H:87 [GLY] 1:1368 [G] F:84 [LEU] 1:1121 [G] ❌ 6AZ3_H:87 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L13 and L16-A 0.66 2.81 0.20 0.64 0.69 0.63 0.66 0.61 0.57 0.23 0.56


Other pairs involving 6AZ3_H_1 or 6YSI_F_1

Total number of entries: 16

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
4Y4O_1N_1A 6AZ3_H_1 0.56 0.68 2.95 0.2 Ribosomal protein L13 and L16-A compare
4Y4O_1N_1A 6YSI_F_1 0.89 0.97 0.77 0.58 Ribosomal protein L13 and L16-A Bacterial large subunit ribosomal RNA compare
1YHQ_J_0 6AZ3_H_1 0.54 0.75 1.56 0.29 Ribosomal protein L13 and L16-A compare
1YHQ_J_0 6YSI_F_1 0.50 0.91 3.15 0.2 Ribosomal protein L13 and L16-A compare
6S0Z_H_A 6YSI_F_1 0.89 0.98 1.14 0.59 Ribosomal protein L13 and L16-A Bacterial large subunit ribosomal RNA compare
6YSI_F_1 7OF0_K_A 0.66 0.91 1.63 0.13 Ribosomal protein L13 and L16-A Bacterial large subunit ribosomal RNA compare
6YSI_F_1 7O7Y_BO_B5 0.44 0.89 4.0 0.16 Ribosomal protein L13 and L16-A compare
6YSI_F_1 7K00_i_a 0.93 1.0 0.65 0.78 Ribosomal protein L13 and L16-A Bacterial large subunit ribosomal RNA compare
6YSI_F_1 7RYG_I_A 0.96 0.98 1.54 0.96 Ribosomal protein L13 and L16-A Bacterial large subunit ribosomal RNA compare
1VQ8_J_0 6AZ3_H_1 0.54 0.75 1.55 0.25 Ribosomal protein L13 and L16-A compare
1VQ8_J_0 6YSI_F_1 0.50 0.91 3.14 0.2 Ribosomal protein L13 and L16-A compare
6AZ3_H_1 7O7Y_BO_B5 0.85 0.91 1.03 0.56 Ribosomal protein L13 and L16-A Eukaryotic large subunit ribosomal RNA compare
6AZ3_H_1 6S0Z_H_A 0.61 0.68 2.98 0.2 Ribosomal protein L13 and L16-A compare
6AZ3_H_1 7K00_i_a 0.59 0.67 2.72 0.17 Ribosomal protein L13 and L16-A compare
6AZ3_H_1 7RYG_I_A 0.58 0.66 3.27 0.2 Ribosomal protein L13 and L16-A compare
6AZ3_H_1 6YSI_F_1 0.61 0.66 2.81 0.2 Ribosomal protein L13 and L16-A compare