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All interfaces > All interologs > Interface groups > group137 > 6S0Z_H_A vs 6YSI_F_1

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Common contacts -

6S0Z_H
6S0Z_A
6YSI_F
6YSI_1
Conserved?
H:114 [ARG] A:573 [A] F:113 [PRO] 1:520 [A] ✔
H:114 [ARG] A:574 [A] F:113 [PRO] 1:521 [A] ✔
H:114 [ARG] A:600 [U] F:113 [PRO] 1:548 [C] ✔
H:114 [ARG] A:601 [G] F:113 [PRO] 1:549 [U] ✔
H:132 [PRO] A:6 [A] F:131 [PRO] 1:6 [A] ✔
H:106 [ILE] A:1182 [G] F:105 [VAL] 1:1128 [G] ✔
H:66 [THR] A:1066 [G] F:65 [THR] 1:1012 [G] ✔
H:66 [THR] A:1184 [C] F:65 [THR] 1:1130 [C] ✔
H:66 [THR] A:1185 [U] F:65 [THR] 1:1131 [U] ✔
H:28 [ARG] A:1056 [U] F:27 [ARG] 1:1002 [U] ✔
H:28 [ARG] A:1184 [C] F:27 [ARG] 1:1130 [C] ✔
H:28 [ARG] A:1185 [U] F:27 [ARG] 1:1131 [U] ✔
H:28 [ARG] A:1186 [A] F:27 [ARG] 1:1133 [A] ✔
H:28 [ARG] A:1187 [A] F:27 [ARG] 1:1134 [A] ✔
H:77 [ARG] A:2667 [G] F:76 [ARG] 1:2629 [G] ✔
H:77 [ARG] A:2668 [A] F:76 [ARG] 1:2630 [A] ✔
H:78 [HIS] A:1175 [G] F:77 [HIS] 1:1121 [G] ✔
H:78 [HIS] A:2067 [U] F:77 [HIS] 1:2029 [G] ✔
H:75 [TYR] A:1183 [G] F:74 [TYR] 1:1129 [G] ✔
H:6 [MET] A:582 [G] F:5 [SER] 1:529 [G] ✔
H:6 [MET] A:583 [A] F:5 [SER] 1:530 [A] ✔
H:31 [SER] A:1049 [C] F:30 [THR] 1:995 [C] ✔
H:31 [SER] A:1050 [C] F:30 [THR] 1:996 [C] ✔
H:31 [SER] A:1056 [U] F:30 [THR] 1:1002 [U] ✔
H:31 [SER] A:1182 [G] F:30 [THR] 1:1128 [G] ✔
H:31 [SER] A:1187 [A] F:30 [THR] 1:1134 [A] ✔
H:2 [ARG] A:1039 [C] F:1 [MET] 1:985 [C] ✔
H:108 [GLY] A:1050 [C] F:107 [GLY] 1:996 [C] ✔
H:108 [GLY] A:1181 [G] F:107 [GLY] 1:1127 [G] ✔
H:108 [GLY] A:1182 [G] F:107 [GLY] 1:1128 [G] ✔
H:8 [ASN] A:583 [A] F:7 [LYS] 1:530 [A] ✔
H:47 [PRO] A:601 [G] F:46 [PRO] 1:549 [U] ✔
H:113 [THR] A:601 [G] F:112 [GLY] 1:549 [U] ✔
H:117 [GLU] A:573 [A] F:116 [TYR] 1:520 [A] ✔
H:117 [GLU] A:2069 [A] F:116 [TYR] 1:2031 [A] ✔
H:35 [SER] A:1050 [C] F:34 [ARG] 1:996 [C] ✔
H:69 [LYS] A:1066 [G] F:68 [LYS] 1:1012 [G] ✔
H:69 [LYS] A:1184 [C] F:68 [LYS] 1:1130 [C] ✔
H:69 [LYS] A:1185 [U] F:68 [LYS] 1:1131 [U] ✔
H:101 [LEU] A:1183 [G] F:100 [ILE] 1:1129 [G] ✔
H:85 [ILE] A:1175 [G] F:84 [LEU] 1:1121 [G] ✔
H:85 [ILE] A:1176 [U] F:84 [LEU] 1:1122 [U] ✔
H:4 [THR] A:1039 [C] F:3 [THR] 1:985 [C] ✔
H:73 [LYS] A:1183 [G] F:72 [LYS] 1:1129 [G] ✔
H:73 [LYS] A:1184 [C] F:72 [LYS] 1:1130 [C] ✔
H:104 [ASN] A:1182 [G] F:103 [ARG] 1:1128 [G] ✔
H:86 [LYS] A:2668 [A] F:85 [LYS] 1:2630 [A] ✔
H:86 [LYS] A:2669 [G] F:85 [LYS] 1:2631 [G] ✔
H:135 [ALA] A:5 [A] F:134 [ALA] 1:5 [A] ✔
H:135 [ALA] A:6 [A] F:134 [ALA] 1:6 [A] ✔
H:135 [ALA] A:2917 [U] F:134 [ALA] 1:2887 [U] ✔
H:135 [ALA] A:2918 [A] F:134 [ALA] 1:2888 [G] ✔
H:80 [ASN] A:1175 [G] F:79 [GLU] 1:1121 [G] ✔
H:80 [ASN] A:2068 [U] F:79 [GLU] 1:2030 [U] ✔
H:121 [LYS] A:8 [U] F:120 [LYS] 1:8 [U] ✔
H:121 [LYS] A:2807 [G] F:120 [LYS] 1:2769 [A] ✔
H:115 [LEU] A:600 [U] F:114 [LEU] 1:548 [C] ✔
H:115 [LEU] A:601 [G] F:114 [LEU] 1:549 [U] ✔
H:124 [PHE] A:7 [G] F:123 [LYS] 1:7 [G] ✔
H:124 [PHE] A:8 [U] F:123 [LYS] 1:8 [U] ✔
H:48 [HIS] A:581 [A] F:47 [HIS] 1:528 [G] ✔
H:48 [HIS] A:582 [G] F:47 [HIS] 1:529 [G] ✔
H:48 [HIS] A:599 [A] F:47 [HIS] 1:547 [A] ✔
H:48 [HIS] A:600 [U] F:47 [HIS] 1:548 [C] ✔
H:48 [HIS] A:601 [G] F:47 [HIS] 1:549 [U] ✔
H:76 [TYR] A:1176 [U] F:75 [TYR] 1:1122 [U] ✔
H:76 [TYR] A:1177 [A] F:75 [TYR] 1:1123 [A] ✔
H:97 [ASN] A:2667 [G] F:96 [LYS] 1:2629 [G] ✔
H:105 [SER] A:1182 [G] F:104 [ALA] 1:1128 [G] ✔
H:105 [SER] A:1183 [G] F:104 [ALA] 1:1129 [G] ✔
H:54 [TYR] A:7 [G] F:53 [TYR] 1:7 [G] ✔
H:54 [TYR] A:8 [U] F:53 [TYR] 1:8 [U] ✔
H:136 [GLN] A:6 [A] F:135 [GLN] 1:6 [A] ✔
H:136 [GLN] A:7 [G] F:135 [GLN] 1:7 [G] ✔
H:136 [GLN] A:2917 [U] F:135 [GLN] 1:2887 [U] ✔
H:109 [MET] A:1050 [C] F:108 [MET] 1:996 [C] ✔
H:109 [MET] A:1051 [C] F:108 [MET] 1:997 [C] ✔
H:109 [MET] A:1181 [G] F:108 [MET] 1:1127 [G] ✔
H:109 [MET] A:1182 [G] F:108 [MET] 1:1128 [G] ✔
H:109 [MET] A:1183 [G] F:108 [MET] 1:1129 [G] ✔
H:83 [GLY] A:1175 [G] F:82 [GLY] 1:1121 [G] ✔
H:83 [GLY] A:2541 [U] F:82 [GLY] 1:2503 [U] ✔
H:83 [GLY] A:2542 [C] F:82 [GLY] 1:2504 [C] ✔
H:34 [ALA] A:1050 [C] F:33 [ALA] 1:996 [C] ✔
H:137 [GLN] A:2917 [U] F:136 [GLN] 1:2887 [U] ✔
H:137 [GLN] A:2918 [A] F:136 [GLN] 1:2888 [G] ✔
H:82 [PRO] A:1175 [G] F:81 [PRO] 1:1121 [G] ✔
H:82 [PRO] A:2541 [U] F:81 [PRO] 1:2503 [U] ✔
H:82 [PRO] A:2542 [C] F:81 [PRO] 1:2504 [C] ✔
H:3 [GLN] A:1039 [C] F:2 [LYS] 1:985 [C] ✔
H:49 [VAL] A:600 [U] F:48 [VAL] 1:548 [C] ✔
H:67 [GLY] A:1185 [U] F:66 [GLY] 1:1131 [U] ✔
H:111 [PRO] A:1051 [C] F:110 [PRO] 1:997 [C] ✔
H:111 [PRO] A:1052 [A] F:110 [PRO] 1:998 [A] ✔
H:103 [GLU] A:2807 [G] F:102 [GLU] 1:2769 [A] ✔
H:16 [TRP] A:7 [G] F:15 [TRP] 1:7 [G] ✔
H:72 [ASP] A:1066 [G] F:71 [ASP] 1:1012 [G] ✔
H:38 [ARG] A:1050 [C] F:37 [ARG] 1:996 [C] ✔
H:38 [ARG] A:1051 [C] F:37 [ARG] 1:997 [C] ✔
H:38 [ARG] A:1052 [A] F:37 [ARG] 1:998 [A] ✔
H:38 [ARG] A:1053 [A] F:37 [ARG] 1:999 [A] ✔
H:26 [LEU] A:1183 [G] F:25 [LEU] 1:1129 [G] ✔
H:26 [LEU] A:1184 [C] F:25 [LEU] 1:1130 [C] ✔
H:79 [SER] A:2668 [A] F:78 [THR] 1:2630 [A] ✔
H:79 [SER] A:2669 [G] F:78 [THR] 1:2631 [G] ✔
H:40 [LYS] A:1050 [C] F:39 [LYS] 1:996 [C] ✔
H:40 [LYS] A:1051 [C] F:39 [LYS] 1:997 [C] ✔
H:40 [LYS] A:1052 [A] F:39 [LYS] 1:998 [A] ✔
H:40 [LYS] A:1053 [A] F:39 [LYS] 1:999 [A] ✔
H:110 [LEU] A:1050 [C] F:109 [LEU] 1:996 [C] ✔
H:110 [LEU] A:1051 [C] F:109 [LEU] 1:997 [C] ✔
H:25 [THR] A:1184 [C] F:24 [THR] 1:1130 [C] ✔
H:25 [THR] A:1185 [U] F:24 [THR] 1:1131 [U] ✔
H:27 [GLY] A:1056 [U] F:26 [GLY] 1:1002 [U] ✔
H:27 [GLY] A:1183 [G] F:26 [GLY] 1:1129 [G] ✔
H:27 [GLY] A:1184 [C] F:26 [GLY] 1:1130 [C] ✔
H:27 [GLY] A:1187 [A] F:26 [GLY] 1:1134 [A] ✔
H:133 [HIS] A:6 [A] F:132 [HIS] 1:6 [A] ✔
H:133 [HIS] A:7 [G] F:132 [HIS] 1:7 [G] ✔
H:81 [HIS] A:1175 [G] F:80 [PHE] 1:1121 [G] ✔
H:81 [HIS] A:2668 [A] F:80 [PHE] 1:2630 [A] ✔
H:81 [HIS] A:2669 [G] F:80 [PHE] 1:2631 [G] ✔
H:84 [GLY] A:1175 [G] F:83 [GLY] 1:1121 [G] ✔
H:84 [GLY] A:2669 [G] F:83 [GLY] 1:2631 [G] ✔
H:114 [ARG] A:599 [A] F:113 [PRO] 1:547 [A] ❌ 6YSI_F_1
H:78 [HIS] A:1176 [U] F:77 [HIS] 1:1122 [U] ❌ 6YSI_F_1
H:6 [MET] A:581 [A] F:5 [SER] 1:528 [G] ❌ 6YSI_F_1
H:47 [PRO] A:600 [U] F:46 [PRO] 1:548 [C] ❌ 6YSI_F_1
H:112 [SER] A:2067 [U] F:111 [LYS] 1:2029 [G] ❌ 6YSI_F_1
H:104 [ASN] A:1183 [G] F:103 [ARG] 1:1129 [G] ❌ 6S0Z_H_A
H:108 [GLY] A:1051 [C] F:107 [GLY] 1:997 [C] ❌ 6S0Z_H_A
H:112 [SER] A:1051 [C] F:111 [LYS] 1:997 [C] ❌ 6S0Z_H_A
H:113 [THR] A:574 [A] F:112 [GLY] 1:521 [A] ❌ 6S0Z_H_A
H:117 [GLU] A:574 [A] F:116 [TYR] 1:521 [A] ❌ 6S0Z_H_A
H:121 [LYS] A:9 [U] F:120 [LYS] 1:9 [A] ❌ 6S0Z_H_A
H:132 [PRO] A:5 [A] F:131 [PRO] 1:5 [A] ❌ 6S0Z_H_A
H:3 [GLN] A:582 [G] F:2 [LYS] 1:529 [G] ❌ 6S0Z_H_A
H:28 [ARG] A:1183 [G] F:27 [ARG] 1:1129 [G] ❌ 6S0Z_H_A
H:4 [THR] A:582 [G] F:3 [THR] 1:529 [G] ❌ 6S0Z_H_A
H:80 [ASN] A:2067 [U] F:79 [GLU] 1:2029 [G] ❌ 6S0Z_H_A
H:97 [ASN] A:2666 [A] F:96 [LYS] 1:2628 [A] ❌ 6S0Z_H_A
H:113 [THR] A:602 [G] F:112 [GLY] 1:550 [G] ❌ 6YSI_1:550 no longer at interface
H:117 [GLU] A:572 [C] F:116 [TYR] 1:519 [C] ❌ 6YSI_1:519 no longer at interface
H:80 [ASN] A:2051 [C] F:79 [GLU] 1:2013 [G] ❌ 6YSI_1:2013 no longer at interface
H:121 [LYS] A:2806 [U] F:120 [LYS] 1:2768 [U] ❌ 6YSI_1:2768 no longer at interface
H:40 [LYS] A:1054 [A] F:39 [LYS] 1:1000 [A] ❌ 6YSI_1:1000 no longer at interface
H:112 [SER] A:2066 [G] F:111 [LYS] 1:2028 [U] ❌ 6S0Z_A:2066 no longer at interface
H:67 [GLY] A:1064 [A] F:66 [GLY] 1:1010 [A] ❌ 6S0Z_A:1064 no longer at interface
H:8 [ASN] A:584 [G] F:7 [LYS] 1:531 [G] ❌ 6S0Z_A:584 no longer at interface
H:81 [HIS] A:2647 [C] F:80 [PHE] 1:2609 [C] ❌ 6S0Z_A:2647 no longer at interface
H:82 [PRO] A:1174 [U] F:81 [PRO] 1:1120 [U] ❌ 6S0Z_A:1174 no longer at interface
H:86 [LYS] A:2795 [C] F:85 [LYS] 1:2757 [C] ❌ 6S0Z_A:2795 no longer at interface
H:92 [GLU] A:2765 [A] F:91 [LYS] 1:2727 [A] ❌ 6S0Z_H:92, 6S0Z_A:2765 no longer at interface
H:100 [ARG] A:2666 [A] F:99 [GLU] 1:2628 [A] ❌ 6YSI_F:99 no longer at interface
H:100 [ARG] A:2667 [G] F:99 [GLU] 1:2629 [G] ❌ 6YSI_F:99 no longer at interface
H:32 [GLU] A:1056 [U] F:31 [GLU] 1:1002 [U] ❌ 6YSI_F:31 no longer at interface
H:118 [LYS] A:9 [U] F:117 [ALA] 1:9 [A] ❌ 6YSI_F:117 no longer at interface
H:107 [LYS] A:2068 [U] F:106 [LYS] 1:2030 [U] ❌ 6S0Z_H:107 no longer at interface
H:107 [LYS] A:2067 [U] F:106 [LYS] 1:2029 [G] ❌ 6S0Z_H:107 no longer at interface
H:116 [GLY] A:601 [G] F:115 [GLY] 1:549 [U] ❌ 6S0Z_H:116 no longer at interface
H:134 [ALA] A:2918 [A] F:133 [ALA] 1:2888 [G] ❌ 6S0Z_H:134 no longer at interface
H:45 [TYR] A:1053 [A] F:44 [TYR] 1:999 [A] ❌ 6S0Z_H:45 no longer at interface
H:64 [GLU] A:1184 [C] F:63 [GLN] 1:1130 [C] ❌ 6S0Z_H:64 no longer at interface
H:65 [PHE] A:1184 [C] F:64 [VAL] 1:1130 [C] ❌ 6S0Z_H:65 no longer at interface
H:68 [ASN] A:1185 [U] F:67 [ASN] 1:1131 [U] ❌ 6S0Z_H:68 no longer at interface
H:9 [GLU] A:583 [A] F:8 [PRO] 1:530 [A] ❌ 6S0Z_H:9 no longer at interface
H:9 [GLU] A:599 [A] F:8 [PRO] 1:547 [A] ❌ 6S0Z_H:9 no longer at interface
H:96 [THR] A:2667 [G] F:95 [HIS] 1:2629 [G] ❌ 6S0Z_H:96 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L13 and L16-A Bacterial large subunit ribosomal RNA 0.98 1.14 0.59 0.97 0.98 0.91 0.86 0.89 0.89 0.53 0.61


Other pairs involving 6S0Z_H_A or 6YSI_F_1

Total number of entries: 17

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
4Y4O_1N_1A 6S0Z_H_A 0.72 0.97 1.13 0.53 Ribosomal protein L13 and L16-A Bacterial large subunit ribosomal RNA compare
4Y4O_1N_1A 6YSI_F_1 0.89 0.97 0.77 0.58 Ribosomal protein L13 and L16-A Bacterial large subunit ribosomal RNA compare
1YHQ_J_0 6S0Z_H_A 0.39 0.92 3.38 0.22 Ribosomal protein L13 and L16-A compare
1YHQ_J_0 6YSI_F_1 0.50 0.91 3.15 0.2 Ribosomal protein L13 and L16-A compare
6S0Z_H_A 7K00_i_a 0.87 0.97 1.27 0.58 Ribosomal protein L13 and L16-A Bacterial large subunit ribosomal RNA compare
6S0Z_H_A 7O7Y_BO_B5 0.37 0.88 4.74 0.17 Ribosomal protein L13 and L16-A compare
6S0Z_H_A 7RYG_I_A 0.89 0.98 1.12 0.56 Ribosomal protein L13 and L16-A Bacterial large subunit ribosomal RNA compare
6S0Z_H_A 6YSI_F_1 0.89 0.98 1.14 0.59 Ribosomal protein L13 and L16-A Bacterial large subunit ribosomal RNA compare
6S0Z_H_A 7OF0_K_A 0.62 0.94 2.27 0.1 Ribosomal protein L13 and L16-A Bacterial large subunit ribosomal RNA compare
6YSI_F_1 7OF0_K_A 0.66 0.91 1.63 0.13 Ribosomal protein L13 and L16-A Bacterial large subunit ribosomal RNA compare
6YSI_F_1 7O7Y_BO_B5 0.44 0.89 4.0 0.16 Ribosomal protein L13 and L16-A compare
6YSI_F_1 7K00_i_a 0.93 1.0 0.65 0.78 Ribosomal protein L13 and L16-A Bacterial large subunit ribosomal RNA compare
6YSI_F_1 7RYG_I_A 0.96 0.98 1.54 0.96 Ribosomal protein L13 and L16-A Bacterial large subunit ribosomal RNA compare
1VQ8_J_0 6YSI_F_1 0.50 0.91 3.14 0.2 Ribosomal protein L13 and L16-A compare
1VQ8_J_0 6S0Z_H_A 0.39 0.92 3.37 0.22 Ribosomal protein L13 and L16-A compare
6AZ3_H_1 6S0Z_H_A 0.61 0.68 2.98 0.2 Ribosomal protein L13 and L16-A compare
6AZ3_H_1 6YSI_F_1 0.61 0.66 2.81 0.2 Ribosomal protein L13 and L16-A compare