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All interfaces > All interologs > Interface groups > group137 > 6YSI_F_1 vs 7O7Y_BO_B5

Interface analysis


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Common contacts -

6YSI_F
6YSI_1
7O7Y_BO
7O7Y_B5
Conserved?
F:104 [ALA] 1:1128 [G] BO:83 [THR] B5:1990 [C] ✔
F:104 [ALA] 1:1129 [G] BO:83 [THR] B5:1991 [G] ✔
F:24 [THR] 1:1130 [C] BO:15 [LEU] B5:1992 [C] ✔
F:24 [THR] 1:1131 [U] BO:15 [LEU] B5:1993 [U] ✔
F:27 [ARG] 1:1129 [G] BO:18 [ARG] B5:1991 [G] ✔
F:27 [ARG] 1:1130 [C] BO:18 [ARG] B5:1992 [C] ✔
F:27 [ARG] 1:1131 [U] BO:18 [ARG] B5:1993 [U] ✔
F:27 [ARG] 1:1133 [A] BO:18 [ARG] B5:1995 [G] ✔
F:27 [ARG] 1:1134 [A] BO:18 [ARG] B5:1996 [A] ✔
F:110 [PRO] 1:997 [C] BO:89 [PRO] B5:1853 [C] ✔
F:110 [PRO] 1:998 [A] BO:89 [PRO] B5:1854 [C] ✔
F:107 [GLY] 1:996 [C] BO:86 [GLY] B5:1852 [C] ✔
F:107 [GLY] 1:997 [C] BO:86 [GLY] B5:1853 [C] ✔
F:107 [GLY] 1:1127 [G] BO:86 [GLY] B5:1989 [G] ✔
F:107 [GLY] 1:1128 [G] BO:86 [GLY] B5:1990 [C] ✔
F:33 [ALA] 1:996 [C] BO:24 [ALA] B5:1852 [C] ✔
F:30 [THR] 1:995 [C] BO:21 [ALA] B5:1851 [G] ✔
F:30 [THR] 1:996 [C] BO:21 [ALA] B5:1852 [C] ✔
F:30 [THR] 1:1134 [A] BO:21 [ALA] B5:1996 [A] ✔
F:67 [ASN] 1:1131 [U] BO:45 [GLY] B5:1993 [U] ✔
F:106 [LYS] 1:2029 [G] BO:85 [ARG] B5:3618 [G] ✔
F:106 [LYS] 1:2030 [U] BO:85 [ARG] B5:3619 [OMC] ✔
F:85 [LYS] 1:2630 [A] BO:70 [PRO] B5:4332 [G] ✔
F:80 [PHE] 1:1121 [G] BO:63 [ASN] B5:1984 [G] ✔
F:78 [THR] 1:2630 [A] BO:61 [ARG] B5:4332 [G] ✔
F:78 [THR] 1:2631 [G] BO:61 [ARG] B5:4333 [G] ✔
F:108 [MET] 1:996 [C] BO:87 [MET] B5:1852 [C] ✔
F:108 [MET] 1:997 [C] BO:87 [MET] B5:1853 [C] ✔
F:108 [MET] 1:1127 [G] BO:87 [MET] B5:1989 [G] ✔
F:108 [MET] 1:1128 [G] BO:87 [MET] B5:1990 [C] ✔
F:108 [MET] 1:1129 [G] BO:87 [MET] B5:1991 [G] ✔
F:34 [ARG] 1:996 [C] BO:25 [LYS] B5:1852 [C] ✔
F:77 [HIS] 1:1121 [G] BO:60 [LYS] B5:1984 [G] ✔
F:109 [LEU] 1:996 [C] BO:88 [LEU] B5:1852 [C] ✔
F:109 [LEU] 1:997 [C] BO:88 [LEU] B5:1853 [C] ✔
F:79 [GLU] 1:1121 [G] BO:62 [MET] B5:1984 [G] ✔
F:79 [GLU] 1:2029 [G] BO:62 [MET] B5:3618 [G] ✔
F:37 [ARG] 1:996 [C] BO:28 [LEU] B5:1852 [C] ✔
F:37 [ARG] 1:997 [C] BO:28 [LEU] B5:1853 [C] ✔
F:64 [VAL] 1:1130 [C] BO:43 [ILE] B5:1992 [C] ✔
F:116 [TYR] 1:521 [A] BO:96 [GLN] B5:432 [U] ✔
F:116 [TYR] 1:2031 [A] BO:96 [GLN] B5:3620 [G] ✔
F:83 [GLY] 1:2631 [G] BO:66 [PRO] B5:4333 [G] ✔
F:26 [GLY] 1:1129 [G] BO:17 [GLY] B5:1991 [G] ✔
F:26 [GLY] 1:1130 [C] BO:17 [GLY] B5:1992 [C] ✔
F:26 [GLY] 1:1134 [A] BO:17 [GLY] B5:1996 [A] ✔
F:103 [ARG] 1:1128 [G] BO:82 [ARG] B5:1990 [C] ✔
F:105 [VAL] 1:1128 [G] BO:84 [VAL] B5:1990 [C] ✔
F:65 [THR] 1:1130 [C] BO:44 [SER] B5:1992 [C] ✔
F:65 [THR] 1:1131 [U] BO:44 [SER] B5:1993 [U] ✔
F:25 [LEU] 1:1129 [G] BO:16 [LEU] B5:1991 [G] ✔
F:25 [LEU] 1:1130 [C] BO:16 [LEU] B5:1992 [C] ✔
F:113 [PRO] 1:520 [A] BO:93 [LYS] B5:431 [G] ✔
F:113 [PRO] 1:548 [C] BO:93 [LYS] B5:1252 [C] ✔
F:113 [PRO] 1:549 [U] BO:93 [LYS] B5:1253 [C] ✔
F:114 [LEU] 1:548 [C] BO:94 [ARG] B5:1252 [C] ✔
F:114 [LEU] 1:549 [U] BO:94 [ARG] B5:1253 [C] ✔
F:63 [GLN] 1:1130 [C] BO:42 [ASN] B5:1992 [C] ✔
F:95 [HIS] 1:2629 [G] BO:74 [ARG] B5:4331 [U] ✔
F:96 [LYS] 1:2629 [G] BO:75 [ALA] B5:4331 [U] ✔
F:112 [GLY] 1:521 [A] BO:91 [LYS] B5:432 [U] ✔
F:82 [GLY] 1:1121 [G] BO:65 [ASN] B5:1984 [G] ❌ 7O7Y_BO_B5
F:82 [GLY] 1:2503 [U] BO:65 [ASN] B5:4206 [U] ❌ 7O7Y_BO_B5
F:82 [GLY] 1:2504 [C] BO:65 [ASN] B5:4207 [C] ❌ 7O7Y_BO_B5
F:76 [ARG] 1:2629 [G] BO:58 [LEU] B5:4331 [U] ❌ 7O7Y_BO_B5
F:76 [ARG] 1:2630 [A] BO:58 [LEU] B5:4332 [G] ❌ 7O7Y_BO_B5
F:27 [ARG] 1:1002 [U] BO:18 [ARG] B5:1858 [G] ❌ 7O7Y_BO_B5
F:30 [THR] 1:1002 [U] BO:21 [ALA] B5:1858 [G] ❌ 7O7Y_BO_B5
F:30 [THR] 1:1128 [G] BO:21 [ALA] B5:1990 [C] ❌ 7O7Y_BO_B5
F:85 [LYS] 1:2631 [G] BO:70 [PRO] B5:4333 [G] ❌ 7O7Y_BO_B5
F:85 [LYS] 1:2757 [C] BO:70 [PRO] B5:4457 [C] ❌ 7O7Y_BO_B5
F:80 [PHE] 1:2609 [C] BO:63 [ASN] B5:4312 [U] ❌ 7O7Y_BO_B5
F:80 [PHE] 1:2630 [A] BO:63 [ASN] B5:4332 [G] ❌ 7O7Y_BO_B5
F:80 [PHE] 1:2631 [G] BO:63 [ASN] B5:4333 [G] ❌ 7O7Y_BO_B5
F:68 [LYS] 1:1130 [C] BO:46 [ASN] B5:1992 [C] ❌ 7O7Y_BO_B5
F:68 [LYS] 1:1131 [U] BO:46 [ASN] B5:1993 [U] ❌ 7O7Y_BO_B5
F:84 [LEU] 1:1121 [G] BO:69 [GLY] B5:1984 [G] ❌ 7O7Y_BO_B5
F:81 [PRO] 1:1120 [U] BO:64 [THR] B5:1983 [U] ❌ 7O7Y_BO_B5
F:81 [PRO] 1:1121 [G] BO:64 [THR] B5:1984 [G] ❌ 7O7Y_BO_B5
F:81 [PRO] 1:2503 [U] BO:64 [THR] B5:4206 [U] ❌ 7O7Y_BO_B5
F:81 [PRO] 1:2504 [C] BO:64 [THR] B5:4207 [C] ❌ 7O7Y_BO_B5
F:77 [HIS] 1:2029 [G] BO:60 [LYS] B5:3618 [G] ❌ 7O7Y_BO_B5
F:79 [GLU] 1:2030 [U] BO:62 [MET] B5:3619 [OMC] ❌ 7O7Y_BO_B5
F:37 [ARG] 1:998 [A] BO:28 [LEU] B5:1854 [C] ❌ 7O7Y_BO_B5
F:37 [ARG] 1:999 [A] BO:28 [LEU] B5:1855 [G] ❌ 7O7Y_BO_B5
F:116 [TYR] 1:520 [A] BO:96 [GLN] B5:431 [G] ❌ 7O7Y_BO_B5
F:111 [LYS] 1:997 [C] BO:90 [HIS] B5:1853 [C] ❌ 7O7Y_BO_B5
F:111 [LYS] 1:2028 [U] BO:90 [HIS] B5:3617 [G] ❌ 7O7Y_BO_B5
F:83 [GLY] 1:1121 [G] BO:66 [PRO] B5:1984 [G] ❌ 7O7Y_BO_B5
F:26 [GLY] 1:1002 [U] BO:17 [GLY] B5:1858 [G] ❌ 7O7Y_BO_B5
F:103 [ARG] 1:1129 [G] BO:82 [ARG] B5:1991 [G] ❌ 7O7Y_BO_B5
F:113 [PRO] 1:521 [A] BO:93 [LYS] B5:432 [U] ❌ 7O7Y_BO_B5
F:96 [LYS] 1:2628 [A] BO:75 [ALA] B5:4330 [A] ❌ 7O7Y_BO_B5
F:112 [GLY] 1:549 [U] BO:91 [LYS] B5:1253 [C] ❌ 7O7Y_BO_B5
F:34 [ARG] 1:998 [A] BO:25 [LYS] B5:1854 [C] ❌ 6YSI_F_1
F:34 [ARG] 1:999 [A] BO:25 [LYS] B5:1855 [G] ❌ 6YSI_F_1
F:34 [ARG] 1:997 [C] BO:25 [LYS] B5:1853 [C] ❌ 6YSI_F_1
F:71 [ASP] 1:1131 [U] BO:49 [ARG] B5:1993 [U] ❌ 6YSI_F_1
F:76 [ARG] 1:2757 [C] BO:58 [LEU] B5:4457 [C] ❌ 6YSI_F_1
F:77 [HIS] 1:1123 [A] BO:60 [LYS] B5:1985 [G] ❌ 6YSI_F_1
F:78 [THR] 1:1121 [G] BO:61 [ARG] B5:1984 [G] ❌ 6YSI_F_1
F:80 [PHE] 1:1120 [U] BO:63 [ASN] B5:1983 [U] ❌ 6YSI_F_1
F:80 [PHE] 1:2503 [U] BO:63 [ASN] B5:4206 [U] ❌ 6YSI_F_1
F:80 [PHE] 1:2504 [C] BO:63 [ASN] B5:4207 [C] ❌ 6YSI_F_1
F:82 [GLY] 1:2609 [C] BO:65 [ASN] B5:4312 [U] ❌ 6YSI_F_1
F:83 [GLY] 1:2630 [A] BO:66 [PRO] B5:4332 [G] ❌ 6YSI_F_1
F:84 [LEU] 1:2029 [G] BO:69 [GLY] B5:3618 [G] ❌ 6YSI_F_1
F:84 [LEU] 1:2030 [U] BO:69 [GLY] B5:3619 [OMC] ❌ 6YSI_F_1
F:85 [LYS] 1:2029 [G] BO:70 [PRO] B5:3618 [G] ❌ 6YSI_F_1
F:85 [LYS] 1:2030 [U] BO:70 [PRO] B5:3619 [OMC] ❌ 6YSI_F_1
F:85 [LYS] 1:1121 [G] BO:70 [PRO] B5:1984 [G] ❌ 6YSI_F_1
F:85 [LYS] 1:1123 [A] BO:70 [PRO] B5:1985 [G] ❌ 6YSI_F_1
F:95 [HIS] 1:2757 [C] BO:74 [ARG] B5:4457 [C] ❌ 6YSI_F_1
F:95 [HIS] 1:2630 [A] BO:74 [ARG] B5:4332 [G] ❌ 6YSI_F_1
F:95 [HIS] 1:2628 [A] BO:74 [ARG] B5:4330 [A] ❌ 6YSI_F_1
F:103 [ARG] 1:2030 [U] BO:82 [ARG] B5:3619 [OMC] ❌ 6YSI_F_1
F:103 [ARG] 1:2029 [G] BO:82 [ARG] B5:3618 [G] ❌ 6YSI_F_1
F:108 [MET] 1:1134 [A] BO:87 [MET] B5:1996 [A] ❌ 6YSI_F_1
F:108 [MET] 1:995 [C] BO:87 [MET] B5:1851 [G] ❌ 6YSI_F_1
F:111 [LYS] 1:2029 [G] BO:90 [HIS] B5:3618 [G] ❌ 6YSI_F_1
F:111 [LYS] 1:2030 [U] BO:90 [HIS] B5:3619 [OMC] ❌ 6YSI_F_1
F:111 [LYS] 1:521 [A] BO:90 [HIS] B5:432 [U] ❌ 6YSI_F_1
F:112 [GLY] 1:2029 [G] BO:91 [LYS] B5:3618 [G] ❌ 6YSI_F_1
F:112 [GLY] 1:2030 [U] BO:91 [LYS] B5:3619 [OMC] ❌ 6YSI_F_1
F:112 [GLY] 1:2028 [U] BO:91 [LYS] B5:3617 [G] ❌ 6YSI_F_1
F:114 [LEU] 1:997 [C] BO:94 [ARG] B5:1853 [C] ❌ 6YSI_F_1
F:114 [LEU] 1:998 [A] BO:94 [ARG] B5:1854 [C] ❌ 6YSI_F_1
F:116 [TYR] 1:2030 [U] BO:96 [GLN] B5:3619 [OMC] ❌ 6YSI_F_1
F:71 [ASP] 1:1012 [G] BO:49 [ARG] B5:1870 [C] ❌ 7O7Y_B5:1870 no longer at interface
F:68 [LYS] 1:1012 [G] BO:46 [ASN] B5:1870 [C] ❌ 7O7Y_B5:1870 no longer at interface
F:65 [THR] 1:1012 [G] BO:44 [SER] B5:1870 [C] ❌ 7O7Y_B5:1870 no longer at interface
F:70 [LEU] 1:2729 [A] BO:48 [TYR] B5:4429 [U] ❌ 6YSI_F:70, 6YSI_1:2729 no longer at interface
F:70 [LEU] 1:2728 [U] BO:48 [TYR] B5:4428 [U] ❌ 6YSI_F:70, 6YSI_1:2728 no longer at interface
F:71 [ASP] 1:1013 [U] BO:49 [ARG] B5:1871 [A] ❌ 6YSI_1:1013 no longer at interface
F:71 [ASP] 1:1011 [A] BO:49 [ARG] B5:1868 [A] ❌ 6YSI_1:1011 no longer at interface
F:78 [THR] 1:2632 [G] BO:61 [ARG] B5:4334 [U] ❌ 6YSI_1:2632 no longer at interface
F:79 [GLU] 1:2012 [C] BO:62 [MET] B5:3601 [OMC] ❌ 6YSI_1:2012 no longer at interface
F:79 [GLU] 1:2013 [G] BO:62 [MET] B5:3602 [C] ❌ 6YSI_1:2013 no longer at interface
F:81 [PRO] 1:2608 [C] BO:64 [THR] B5:4311 [C] ❌ 6YSI_1:2608 no longer at interface
F:82 [GLY] 1:2608 [C] BO:65 [ASN] B5:4311 [C] ❌ 6YSI_1:2608 no longer at interface
F:95 [HIS] 1:2758 [U] BO:74 [ARG] B5:4458 [C] ❌ 6YSI_1:2758 no longer at interface
F:75 [TYR] 1:1123 [A] BO:57 [PHE] B5:1985 [G] ❌ 7O7Y_BO:57 no longer at interface
F:100 [ILE] 1:1129 [G] BO:79 [ILE] B5:1991 [G] ❌ 7O7Y_BO:79 no longer at interface
F:72 [LYS] 1:1129 [G] BO:50 [ASN] B5:1991 [G] ❌ 7O7Y_BO:50 no longer at interface
F:72 [LYS] 1:1130 [C] BO:50 [ASN] B5:1992 [C] ❌ 7O7Y_BO:50 no longer at interface
F:74 [TYR] 1:1129 [G] BO:54 [TYR] B5:1991 [G] ❌ 7O7Y_BO:54 no longer at interface
F:115 [GLY] 1:549 [U] BO:95 [GLY] B5:1253 [C] ❌ 7O7Y_BO:95 no longer at interface
F:35 [ARG] 1:1002 [U] BO:26 [GLN] B5:1858 [G] ❌ 6YSI_F:35 no longer at interface
F:69 [ALA] 1:2727 [A] BO:47 [PHE] B5:4427 [A] ❌ 6YSI_F:69 no longer at interface
F:73 [LYS] 1:1130 [C] BO:53 [LYS] B5:1992 [C] ❌ 6YSI_F:73 no longer at interface
F:73 [LYS] 1:1131 [U] BO:53 [LYS] B5:1993 [U] ❌ 6YSI_F:73 no longer at interface
F:87 [THR] 1:2629 [G] BO:72 [HIS] B5:4331 [U] ❌ 6YSI_F:87 no longer at interface
F:87 [THR] 1:2630 [A] BO:72 [HIS] B5:4332 [G] ❌ 6YSI_F:87 no longer at interface
F:92 [LEU] 1:2629 [G] BO:73 [PHE] B5:4331 [U] ❌ 6YSI_F:92 no longer at interface
F:92 [LEU] 1:2628 [A] BO:73 [PHE] B5:4330 [A] ❌ 6YSI_F:92 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L13 and L16-A 0.89 4.0 0.16 0.63 0.9 0.6 0.68 0.44 0.36 0.29 0.29


Other pairs involving 6YSI_F_1 or 7O7Y_BO_B5

Total number of entries: 18

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1VQ8_J_0 7O7Y_BO_B5 0.55 0.94 1.64 0.3 Ribosomal protein L13 and L16-A compare
1VQ8_J_0 6YSI_F_1 0.50 0.91 3.14 0.2 Ribosomal protein L13 and L16-A compare
1YHQ_J_0 6YSI_F_1 0.50 0.91 3.15 0.2 Ribosomal protein L13 and L16-A compare
1YHQ_J_0 7O7Y_BO_B5 0.54 0.94 1.64 0.31 Ribosomal protein L13 and L16-A compare
4Y4O_1N_1A 6YSI_F_1 0.89 0.97 0.77 0.58 Ribosomal protein L13 and L16-A Bacterial large subunit ribosomal RNA compare
4Y4O_1N_1A 7O7Y_BO_B5 0.39 0.89 3.76 0.16 Ribosomal protein L13 and L16-A compare
6AZ3_H_1 7O7Y_BO_B5 0.85 0.91 1.03 0.56 Ribosomal protein L13 and L16-A Eukaryotic large subunit ribosomal RNA compare
6AZ3_H_1 6YSI_F_1 0.61 0.66 2.81 0.2 Ribosomal protein L13 and L16-A compare
6AZ3_H_2 7O7Y_BO_B5 0.47 0.9 1.1 0.23 Ribosomal protein L13 and L16-A Eukaryotic large subunit ribosomal RNA compare
6AZ3_H_4 7O7Y_BO_B5 0.91 0.87 0.64 0.32 Ribosomal protein L13 and L16-A Eukaryotic large subunit ribosomal RNA compare
6AZ3_H_6 7O7Y_BO_B5 0.61 0.81 1.95 0.16 Ribosomal protein L13 and L16-A compare
6S0Z_H_A 7O7Y_BO_B5 0.37 0.88 4.74 0.17 Ribosomal protein L13 and L16-A compare
6S0Z_H_A 6YSI_F_1 0.89 0.98 1.14 0.59 Ribosomal protein L13 and L16-A Bacterial large subunit ribosomal RNA compare
6YSI_F_1 7OF0_K_A 0.66 0.91 1.63 0.13 Ribosomal protein L13 and L16-A Bacterial large subunit ribosomal RNA compare
6YSI_F_1 7O7Y_BO_B5 0.44 0.89 4.0 0.16 Ribosomal protein L13 and L16-A compare
6YSI_F_1 7K00_i_a 0.93 1.0 0.65 0.78 Ribosomal protein L13 and L16-A Bacterial large subunit ribosomal RNA compare
6YSI_F_1 7RYG_I_A 0.96 0.98 1.54 0.96 Ribosomal protein L13 and L16-A Bacterial large subunit ribosomal RNA compare
7K00_i_a 7O7Y_BO_B5 0.36 0.89 4.02 0.14 Ribosomal protein L13 and L16-A compare