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All interfaces > All interologs > Interface groups > group138 > 1VQ8_H_0 vs 4Y4O_1Q_1A

Interface analysis


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Licorice
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Licorice
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Common contacts -

1VQ8_H
1VQ8_0
4Y4O_1Q
4Y4O_1A
Conserved?
H:114 [ARG] 0:2283 [G] 1Q:84 [GLY] 1A:2262 [G] ✔
H:114 [ARG] 0:2309 [C] 1Q:84 [GLY] 1A:2287 [C] ✔
H:114 [ARG] 0:2310 [G] 1Q:84 [GLY] 1A:2288 [G] ✔
H:19 [TYR] 0:1007 [A] 1Q:9 [TYR] 1A:957 [A] ✔
H:19 [TYR] 0:1008 [C] 1Q:9 [TYR] 1A:958 [C] ✔
H:19 [TYR] 0:2312 [G] 1Q:9 [TYR] 1A:2290 [A] ✔
H:96 [ARG] 0:1055 [G] 1Q:75 [THR] 1A:1001 [G] ✔
H:96 [ARG] 0:1056 [U] 1Q:75 [THR] 1A:1002 [A] ✔
H:18 [GLU] 0:963 [C] 1Q:8 [LYS] 1A:915 [U] ✔
H:18 [GLU] 0:964 [G] 1Q:8 [LYS] 1A:916 [G] ✔
H:116 [ALA] 0:1054 [G] 1Q:86 [GLY] 1A:1000 [C] ✔
H:116 [ALA] 0:1055 [G] 1Q:86 [GLY] 1A:1001 [G] ✔
H:116 [ALA] 0:2309 [C] 1Q:86 [GLY] 1A:2287 [C] ✔
H:116 [ALA] 0:2310 [G] 1Q:86 [GLY] 1A:2288 [G] ✔
H:117 [PHE] 0:1054 [G] 1Q:87 [LYS] 1A:1000 [C] ✔
H:117 [PHE] 0:1055 [G] 1Q:87 [LYS] 1A:1001 [G] ✔
H:117 [PHE] 0:2310 [G] 1Q:87 [LYS] 1A:2288 [G] ✔
H:117 [PHE] 0:2311 [A] 1Q:87 [LYS] 1A:2289 [G] ✔
H:98 [ASN] 0:1055 [G] 1Q:77 [LYS] 1A:1001 [G] ✔
H:98 [ASN] 0:1056 [U] 1Q:77 [LYS] 1A:1002 [A] ✔
H:88 [ARG] 0:1002 [G] 1Q:67 [ARG] 1A:952 [G] ✔
H:88 [ARG] 0:1003 [U] 1Q:67 [ARG] 1A:953 [U] ✔
H:160 [SER] 0:1133 [A] 1Q:128 [LYS] 1A:1075 [A] ✔
H:160 [SER] 0:1134 [G] 1Q:128 [LYS] 1A:1076 [G] ✔
H:156 [LYS] 0:2502 [C] 1Q:124 [LYS] 1A:2479 [C] ✔
H:156 [LYS] 0:2517 [A] 1Q:124 [LYS] 1A:2494 [G] ✔
H:156 [LYS] 0:2518 [C] 1Q:124 [LYS] 1A:2495 [C] ✔
H:156 [LYS] 0:2519 [C] 1Q:124 [LYS] 1A:2496 [G] ✔
H:156 [LYS] 0:2520 [G] 1Q:124 [LYS] 1A:2497 [G] ✔
H:61 [SER] 0:2519 [C] 1Q:46 [GLN] 1A:2496 [G] ✔
H:61 [SER] 0:2520 [G] 1Q:46 [GLN] 1A:2497 [G] ✔
H:92 [HIS] 0:965 [A] 1Q:71 [ASP] 1A:917 [A] ✔
H:92 [HIS] 0:1004 [C] 1Q:71 [ASP] 1A:954 [C] ✔
H:90 [PHE] 0:966 [U] 1Q:69 [PHE] 1A:918 [U] ✔
H:90 [PHE] 0:967 [U] 1Q:69 [PHE] 1A:919 [A] ✔
H:157 [ILE] 0:2519 [C] 1Q:125 [LEU] 1A:2496 [G] ✔
H:157 [ILE] 0:2520 [G] 1Q:125 [LEU] 1A:2497 [G] ✔
H:152 [ARG] 0:2502 [C] 1Q:120 [ILE] 1A:2479 [C] ✔
H:152 [ARG] 0:2503 [A] 1Q:120 [ILE] 1A:2480 [G] ✔
H:152 [ARG] 0:2504 [A] 1Q:120 [ILE] 1A:2481 [A] ✔
H:64 [ALA] 0:2518 [C] 1Q:49 [ALA] 1A:2495 [C] ✔
H:64 [ALA] 0:2519 [C] 1Q:49 [ALA] 1A:2496 [G] ✔
H:158 [THR] 0:2520 [G] 1Q:126 [PRO] 1A:2497 [G] ✔
H:158 [THR] 0:2521 [A] 1Q:126 [PRO] 1A:2498 [G] ✔
H:118 [GLY] 0:1054 [G] 1Q:88 [GLY] 1A:1000 [C] ✔
H:118 [GLY] 0:1055 [G] 1Q:88 [GLY] 1A:1001 [G] ✔
H:159 [PRO] 0:1134 [G] 1Q:127 [ILE] 1A:1076 [G] ✔
H:115 [ALA] 0:2283 [G] 1Q:85 [LYS] 1A:2262 [G] ✔
H:115 [ALA] 0:2309 [C] 1Q:85 [LYS] 1A:2287 [C] ✔
H:115 [ALA] 0:2310 [G] 1Q:85 [LYS] 1A:2288 [G] ✔
H:71 [ARG] 0:2504 [A] 1Q:56 [ARG] 1A:2481 [A] ✔
H:71 [ARG] 0:2517 [A] 1Q:56 [ARG] 1A:2494 [G] ✔
H:155 [ASN] 0:1134 [G] 1Q:123 [HIS] 1A:1076 [G] ✔
H:155 [ASN] 0:1135 [G] 1Q:123 [HIS] 1A:1077 [G] ✔
H:155 [ASN] 0:2501 [G] 1Q:123 [HIS] 1A:2478 [C] ✔
H:155 [ASN] 0:2502 [C] 1Q:123 [HIS] 1A:2479 [C] ✔
H:155 [ASN] 0:2519 [C] 1Q:123 [HIS] 1A:2496 [G] ✔
H:155 [ASN] 0:2520 [G] 1Q:123 [HIS] 1A:2497 [G] ✔
H:111 [ASP] 0:2530 [C] 1Q:81 [VAL] 1A:2507 [G] ✔
H:60 [GLY] 0:2519 [C] 1Q:45 [GLN] 1A:2496 [G] ✔
H:17 [ARG] 0:964 [G] 1Q:7 [MET] 1A:916 [G] ✔
H:17 [ARG] 0:965 [A] 1Q:7 [MET] 1A:917 [A] ✔
H:151 [ARG] 0:1135 [G] 1Q:119 [ARG] 1A:1077 [G] ✔
H:151 [ARG] 0:2502 [C] 1Q:119 [ARG] 1A:2479 [C] ✔
H:151 [ARG] 0:2503 [A] 1Q:119 [ARG] 1A:2480 [G] ✔
H:58 [ARG] 0:2520 [G] 1Q:43 [THR] 1A:2497 [G] ✔
H:131 [GLU] 0:1004 [C] 1Q:101 [ARG] 1A:954 [C] ✔
H:113 [MET] 0:1055 [G] 1Q:83 [MET] 1A:1001 [G] ✔
H:113 [MET] 0:1057 [A] 1Q:83 [MET] 1A:1004 [A] ✔
H:113 [MET] 0:1058 [A] 1Q:83 [MET] 1A:1005 [A] ✔
H:113 [MET] 0:2283 [G] 1Q:83 [MET] 1A:2262 [G] ✔
H:113 [MET] 0:2530 [C] 1Q:83 [MET] 1A:2507 [G] ✔
H:113 [MET] 0:2531 [U] 1Q:83 [MET] 1A:2508 [C] ✔
H:97 [GLU] 0:1056 [U] 1Q:76 [LYS] 1A:1002 [A] ✔
H:97 [GLU] 0:2494 [G] 1Q:76 [LYS] 1A:2471 [A] ✔
H:112 [GLY] 0:2530 [C] 1Q:82 [ARG] 1A:2507 [G] ✔
H:112 [GLY] 0:2531 [U] 1Q:82 [ARG] 1A:2508 [C] ✔
H:114 [ARG] 0:2285 [G] 1Q:84 [GLY] 1A:2264 [G] ❌ 4Y4O_1Q_1A
H:114 [ARG] 0:2288 [G] 1Q:84 [GLY] 1A:2267 [G] ❌ 4Y4O_1Q_1A
H:114 [ARG] 0:2531 [U] 1Q:84 [GLY] 1A:2508 [C] ❌ 4Y4O_1Q_1A
H:19 [TYR] 0:2311 [A] 1Q:9 [TYR] 1A:2289 [G] ❌ 4Y4O_1Q_1A
H:96 [ARG] 0:1006 [A] 1Q:75 [THR] 1A:956 [A] ❌ 4Y4O_1Q_1A
H:96 [ARG] 0:1054 [G] 1Q:75 [THR] 1A:1000 [C] ❌ 4Y4O_1Q_1A
H:117 [PHE] 0:1006 [A] 1Q:87 [LYS] 1A:956 [A] ❌ 4Y4O_1Q_1A
H:16 [ARG] 0:1005 [A] 1Q:6 [ARG] 1A:955 [A] ❌ 4Y4O_1Q_1A
H:16 [ARG] 0:1007 [A] 1Q:6 [ARG] 1A:957 [A] ❌ 4Y4O_1Q_1A
H:16 [ARG] 0:1008 [C] 1Q:6 [ARG] 1A:958 [C] ❌ 4Y4O_1Q_1A
H:87 [LEU] 0:1002 [G] 1Q:66 [ILE] 1A:952 [G] ❌ 4Y4O_1Q_1A
H:156 [LYS] 0:2501 [G] 1Q:124 [LYS] 1A:2478 [C] ❌ 4Y4O_1Q_1A
H:92 [HIS] 0:966 [U] 1Q:71 [ASP] 1A:918 [U] ❌ 4Y4O_1Q_1A
H:92 [HIS] 0:1003 [U] 1Q:71 [ASP] 1A:953 [U] ❌ 4Y4O_1Q_1A
H:90 [PHE] 0:1002 [G] 1Q:69 [PHE] 1A:952 [G] ❌ 4Y4O_1Q_1A
H:90 [PHE] 0:1003 [U] 1Q:69 [PHE] 1A:953 [U] ❌ 4Y4O_1Q_1A
H:157 [ILE] 0:1133 [A] 1Q:125 [LEU] 1A:1075 [A] ❌ 4Y4O_1Q_1A
H:158 [THR] 0:1133 [A] 1Q:126 [PRO] 1A:1075 [A] ❌ 4Y4O_1Q_1A
H:159 [PRO] 0:1133 [A] 1Q:127 [ILE] 1A:1075 [A] ❌ 4Y4O_1Q_1A
H:17 [ARG] 0:966 [U] 1Q:7 [MET] 1A:918 [U] ❌ 4Y4O_1Q_1A
H:86 [THR] 0:1002 [G] 1Q:65 [PHE] 1A:952 [G] ❌ 4Y4O_1Q_1A
H:20 [ILE] 0:1007 [A] 1Q:10 [ARG] 1A:957 [A] ❌ 4Y4O_1Q_1A
H:113 [MET] 0:1054 [G] 1Q:83 [MET] 1A:1000 [C] ❌ 4Y4O_1Q_1A
H:113 [MET] 0:2310 [G] 1Q:83 [MET] 1A:2288 [G] ❌ 4Y4O_1Q_1A
H:20 [ILE] 0:2312 [G] 1Q:10 [ARG] 1A:2290 [A] ❌ 1VQ8_H_0
H:131 [GLU] 0:1003 [U] 1Q:101 [ARG] 1A:953 [U] ❌ 1VQ8_H_0
H:60 [GLY] 0:2518 [C] 1Q:45 [GLN] 1A:2495 [C] ❌ 1VQ8_H_0
H:16 [ARG] 0:966 [U] 1Q:6 [ARG] 1A:918 [U] ❌ 1VQ8_H_0
H:16 [ARG] 0:965 [A] 1Q:6 [ARG] 1A:917 [A] ❌ 1VQ8_H_0
H:16 [ARG] 0:964 [G] 1Q:6 [ARG] 1A:916 [G] ❌ 1VQ8_H_0
H:86 [THR] 0:968 [G] 1Q:65 [PHE] 1A:920 [G] ❌ 1VQ8_H_0
H:87 [LEU] 0:967 [U] 1Q:66 [ILE] 1A:919 [A] ❌ 1VQ8_H_0
H:90 [PHE] 0:965 [A] 1Q:69 [PHE] 1A:917 [A] ❌ 1VQ8_H_0
H:92 [HIS] 0:1005 [A] 1Q:71 [ASP] 1A:955 [A] ❌ 1VQ8_H_0
H:97 [GLU] 0:2495 [U] 1Q:76 [LYS] 1A:2472 [U] ❌ 1VQ8_H_0
H:18 [GLU] 0:1008 [C] 1Q:8 [LYS] 1A:958 [C] ❌ 1VQ8_H_0
H:112 [GLY] 0:2283 [G] 1Q:82 [ARG] 1A:2262 [G] ❌ 1VQ8_H_0
H:112 [GLY] 0:2285 [G] 1Q:82 [ARG] 1A:2264 [G] ❌ 1VQ8_H_0
H:115 [ALA] 0:2288 [G] 1Q:85 [LYS] 1A:2267 [G] ❌ 1VQ8_H_0
H:116 [ALA] 0:2311 [A] 1Q:86 [GLY] 1A:2289 [G] ❌ 1VQ8_H_0
H:118 [GLY] 0:1056 [U] 1Q:88 [GLY] 1A:1002 [A] ❌ 1VQ8_H_0
H:114 [ARG] 0:2282 [U] 1Q:84 [GLY] 1A:2261 [U] ❌ 4Y4O_1A:2261 no longer at interface
H:114 [ARG] 0:2287 [C] 1Q:84 [GLY] 1A:2266 [C] ❌ 4Y4O_1A:2266 no longer at interface
H:19 [TYR] 0:2363 [G] 1Q:9 [TYR] 1A:2341 [G] ❌ 4Y4O_1A:2341 no longer at interface
H:160 [SER] 0:1132 [A] 1Q:128 [LYS] 1A:1074 [A] ❌ 1VQ8_0:1132 no longer at interface
H:162 [ARG] 0:1222 [A] 1Q:130 [LYS] 1A:1164 [C] ❌ 1VQ8_H:162, 1VQ8_0:1222 no longer at interface
H:71 [ARG] 0:2505 [G] 1Q:56 [ARG] 1A:2482 [G] ❌ 1VQ8_0:2505 no longer at interface
H:74 [ILE] 0:2505 [G] 1Q:59 [ARG] 1A:2482 [G] ❌ 1VQ8_H:74, 1VQ8_0:2505 no longer at interface
H:74 [ILE] 0:1178 [G] 1Q:59 [ARG] 1A:1120 [G] ❌ 1VQ8_H:74, 1VQ8_0:1178 no longer at interface
H:111 [ASP] 0:2529 [G] 1Q:81 [VAL] 1A:2506 [G] ❌ 1VQ8_0:2529 no longer at interface
H:112 [GLY] 0:2486 [A] 1Q:82 [ARG] 1A:2463 [A] ❌ 1VQ8_0:2486 no longer at interface
H:112 [GLY] 0:2485 [A] 1Q:82 [ARG] 1A:2462 [A] ❌ 1VQ8_0:2485 no longer at interface
H:112 [GLY] 0:2284 [G] 1Q:82 [ARG] 1A:2263 [OMG] ❌ 1VQ8_0:2284 no longer at interface
H:113 [MET] 0:1060 [C] 1Q:83 [MET] 1A:1007 [G] ❌ 1VQ8_0:1060 no longer at interface
H:161 [CYS] 0:1134 [G] 1Q:129 [THR] 1A:1076 [G] ❌ 4Y4O_1Q:129 no longer at interface
H:126 [ARG] 0:1004 [C] 1Q:96 [VAL] 1A:954 [C] ❌ 4Y4O_1Q:96 no longer at interface
H:154 [TYR] 0:1133 [A] 1Q:122 [GLY] 1A:1075 [A] ❌ 4Y4O_1Q:122 no longer at interface
H:154 [TYR] 0:1134 [G] 1Q:122 [GLY] 1A:1076 [G] ❌ 4Y4O_1Q:122 no longer at interface
H:154 [TYR] 0:1135 [G] 1Q:122 [GLY] 1A:1077 [G] ❌ 4Y4O_1Q:122 no longer at interface
H:89 [LYS] 0:1002 [G] 1Q:68 [ILE] 1A:952 [G] ❌ 4Y4O_1Q:68 no longer at interface
H:89 [LYS] 0:1003 [U] 1Q:68 [ILE] 1A:953 [U] ❌ 4Y4O_1Q:68 no longer at interface
H:89 [LYS] 0:1004 [C] 1Q:68 [ILE] 1A:954 [C] ❌ 4Y4O_1Q:68 no longer at interface
H:21 [THR] 0:1007 [A] 1Q:11 [LYS] 1A:957 [A] ❌ 1VQ8_H:21 no longer at interface
H:21 [THR] 0:2312 [G] 1Q:11 [LYS] 1A:2290 [A] ❌ 1VQ8_H:21 no longer at interface
H:21 [THR] 0:1006 [A] 1Q:11 [LYS] 1A:956 [A] ❌ 1VQ8_H:21 no longer at interface
H:21 [THR] 0:2311 [A] 1Q:11 [LYS] 1A:2289 [G] ❌ 1VQ8_H:21 no longer at interface
H:40 [ALA] 0:1002 [G] 1Q:29 [PHE] 1A:952 [G] ❌ 1VQ8_H:40 no longer at interface
H:40 [ALA] 0:1001 [U] 1Q:29 [PHE] 1A:951 [U] ❌ 1VQ8_H:40 no longer at interface
H:40 [ALA] 0:967 [U] 1Q:29 [PHE] 1A:919 [A] ❌ 1VQ8_H:40 no longer at interface
H:63 [GLU] 0:2518 [C] 1Q:48 [GLU] 1A:2495 [C] ❌ 1VQ8_H:63 no longer at interface
H:67 [LEU] 0:2517 [A] 1Q:52 [VAL] 1A:2494 [G] ❌ 1VQ8_H:67 no longer at interface
H:84 [LYS] 0:968 [G] 1Q:63 [LYS] 1A:920 [G] ❌ 1VQ8_H:84 no longer at interface
H:84 [LYS] 0:969 [G] 1Q:63 [LYS] 1A:921 [G] ❌ 1VQ8_H:84 no longer at interface
H:95 [LEU] 0:1056 [U] 1Q:74 [TYR] 1A:1002 [A] ❌ 1VQ8_H:95 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L10e 0.92 2.06 0.18 0.72 0.93 0.61 0.9 0.66 0.64 0.22 0.45


Other pairs involving 1VQ8_H_0 or 4Y4O_1Q_1A

Total number of entries: 24

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
4Y4O_1Q_1A 7N1P_LP_23 0.84 0.97 0.77 0.58 Ribosomal protein L10e Bacterial large subunit ribosomal RNA compare
4Y4O_1Q_1A 7RYG_L_A 0.80 0.96 2.45 0.58 Ribosomal protein L10e Bacterial large subunit ribosomal RNA compare
4Y4O_1Q_1A 7OF0_N_A 0.56 0.93 2.96 0.15 Ribosomal protein L10e Bacterial large subunit ribosomal RNA compare
4Y4O_1Q_1A 7O7Y_BI_B5 0.68 0.89 2.42 0.12 Ribosomal protein L10e compare
4Y4O_1Q_1A 6AZ3_N_2 0.77 0.79 2.36 0.16 Ribosomal protein L10e compare
4Y4O_1Q_1A 4YBB_DN_DA 0.82 0.97 0.96 0.58 Ribosomal protein L10e Bacterial large subunit ribosomal RNA compare
4Y4O_1Q_1A 6S0Z_K_A 0.83 0.97 1.53 0.64 Ribosomal protein L10e Bacterial large subunit ribosomal RNA compare
4Y4O_1Q_1A 7PJS_M_A 0.84 0.97 0.9 0.58 Ribosomal protein L10e Bacterial large subunit ribosomal RNA compare
4Y4O_1Q_1A 6AZ3_N_1 0.52 0.69 2.93 0.07 Ribosomal protein L10e compare
4Y4O_1Q_1A 7K00_l_a 0.85 0.97 0.85 0.55 Ribosomal protein L10e Bacterial large subunit ribosomal RNA compare
1VQ8_H_0 7O7Y_BI_B5 0.79 0.94 1.27 0.35 Ribosomal protein L10e compare
1VQ8_H_0 7K00_l_a 0.62 0.9 2.5 0.14 Ribosomal protein L10e compare
1VQ8_H_0 6AZ3_N_1 0.65 0.77 1.62 0.24 Ribosomal protein L10e compare
1VQ8_H_0 4YBB_DN_DA 0.62 0.91 2.19 0.16 Ribosomal protein L10e compare
1VQ8_H_0 7N1P_LP_23 0.63 0.91 2.2 0.16 Ribosomal protein L10e compare
1VQ8_H_0 6AZ3_N_2 0.89 0.81 1.6 0.39 Ribosomal protein L10e compare
1VQ8_H_0 7RYG_L_A 0.62 0.91 3.04 0.16 Ribosomal protein L10e compare
1VQ8_H_0 7PJS_M_A 0.64 0.91 2.21 0.16 Ribosomal protein L10e compare
1VQ8_H_0 4Y4O_1Q_1A 0.66 0.92 2.06 0.18 Ribosomal protein L10e compare
1VQ8_H_0 1YHQ_H_0 1.00 1.0 0.26 1.0 Ribosomal protein L10e Archaeal large subunit ribosomal RNA compare
1VQ8_H_0 6S0Z_K_A 0.67 0.92 2.67 0.18 Ribosomal protein L10e compare
1YHQ_H_0 4Y4O_1Q_1A 0.66 0.92 2.12 0.18 Ribosomal protein L10e compare
1JJ2_H_0 4Y4O_1Q_1A 0.64 0.92 2.15 0.2 Ribosomal protein L10e compare
1JJ2_H_0 1VQ8_H_0 0.97 1.0 0.39 0.66 Ribosomal protein L10e Archaeal large subunit ribosomal RNA compare